Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 SNORA25.13-201ENST00000516395 103 ntBASIC-0.71□□□□□ -2.52
NKX6-2Q9C056 AC113139.1-201ENST00000605049 239 ntBASIC-0.71□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.72□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.72□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.80-201ENST00000362996 102 ntBASIC-0.72□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.160-201ENST00000363677 92 ntBASIC-0.72□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.72□□□□□ -2.52
NKX6-2Q9C056 U8.6-201ENST00000364939 135 ntBASIC-0.72□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.485-201ENST00000384395 102 ntBASIC-0.72□□□□□ -2.52
NKX6-2Q9C056 RNU4-70P-201ENST00000384579 139 ntBASIC-0.72□□□□□ -2.52
NKX6-2Q9C056 SNORA8.3-201ENST00000384679 139 ntBASIC-0.72□□□□□ -2.52
NKX6-2Q9C056 RNY4P36-201ENST00000391116 96 ntBASIC-0.72□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.72□□□□□ -2.52
NKX6-2Q9C056 AC016907.1-201ENST00000419483 435 ntBASIC-0.72□□□□□ -2.52
NKX6-2Q9C056 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-0.72□□□□□ -2.52
NKX6-2Q9C056 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.72□□□□□ -2.52
NKX6-2Q9C056 SNORA40.14-201ENST00000516543 86 ntBASIC-0.72□□□□□ -2.52
NKX6-2Q9C056 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-0.72□□□□□ -2.52
NKX6-2Q9C056 MIR4432-201ENST00000581823 84 ntBASIC-0.72□□□□□ -2.52
NKX6-2Q9C056 AC096720.1-201ENST00000604441 183 ntBASIC-0.72□□□□□ -2.52
NKX6-2Q9C056 SNORD58B-201ENST00000607313 66 ntBASIC-0.72□□□□□ -2.52
NKX6-2Q9C056 MIR6507-201ENST00000613630 70 ntBASIC-0.72□□□□□ -2.52
NKX6-2Q9C056 MIR376A1-201ENST00000616574 68 ntBASIC-0.72□□□□□ -2.52
NKX6-2Q9C056 MIR6759-201ENST00000638110 65 ntBASIC-0.72□□□□□ -2.52
NKX6-2Q9C056 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.73□□□□□ -2.53
NKX6-2Q9C056 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.73□□□□□ -2.53
NKX6-2Q9C056 RNA5SP205-201ENST00000364653 136 ntBASIC-0.73□□□□□ -2.53
NKX6-2Q9C056 Y_RNA.279-201ENST00000364763 95 ntBASIC-0.73□□□□□ -2.53
NKX6-2Q9C056 RNY1P2-201ENST00000364820 117 ntBASIC-0.73□□□□□ -2.53
NKX6-2Q9C056 RNU6-662P-201ENST00000384253 104 ntBASIC-0.73□□□□□ -2.53
NKX6-2Q9C056 SNORD116-29-201ENST00000384516 83 ntBASIC-0.73□□□□□ -2.53
NKX6-2Q9C056 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.73□□□□□ -2.53
NKX6-2Q9C056 RNA5SP451-201ENST00000410588 110 ntBASIC-0.73□□□□□ -2.53
NKX6-2Q9C056 AL589823.1-201ENST00000429577 183 ntBASIC-0.73□□□□□ -2.53
NKX6-2Q9C056 MTND4P19-201ENST00000446659 478 ntBASIC-0.73□□□□□ -2.53
NKX6-2Q9C056 SNORA20.3-201ENST00000516880 132 ntBASIC-0.73□□□□□ -2.53
NKX6-2Q9C056 RNU7-70P-201ENST00000516941 66 ntBASIC-0.73□□□□□ -2.53
NKX6-2Q9C056 AP001180.6-201ENST00000584918 159 ntBASIC-0.73□□□□□ -2.53
NKX6-2Q9C056 AL008718.3-201ENST00000610217 321 ntBASIC-0.73□□□□□ -2.53
NKX6-2Q9C056 AL391099.1-201ENST00000624635 187 ntBASIC-0.73□□□□□ -2.53
NKX6-2Q9C056 AL606534.2-204ENST00000635008 178 ntBASIC-0.73□□□□□ -2.53
NKX6-2Q9C056 MIR655-201ENST00000362159 97 ntBASIC-0.74□□□□□ -2.53
NKX6-2Q9C056 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.74□□□□□ -2.53
NKX6-2Q9C056 SNORD75.1-201ENST00000408373 60 ntBASIC-0.74□□□□□ -2.53
NKX6-2Q9C056 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.74□□□□□ -2.53
NKX6-2Q9C056 RNA5SP153-201ENST00000516498 76 ntBASIC-0.74□□□□□ -2.53
NKX6-2Q9C056 RNA5SP285-201ENST00000516619 119 ntBASIC-0.74□□□□□ -2.53
NKX6-2Q9C056 AC097639.2-201ENST00000603159 172 ntBASIC-0.74□□□□□ -2.53
NKX6-2Q9C056 RN7SL660P-201ENST00000614852 299 ntBASIC-0.74□□□□□ -2.53
NKX6-2Q9C056 RNU4-90P-201ENST00000362773 141 ntBASIC-0.75□□□□□ -2.53
NKX6-2Q9C056 RNU6-509P-201ENST00000363519 107 ntBASIC-0.75□□□□□ -2.53
NKX6-2Q9C056 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.75□□□□□ -2.53
NKX6-2Q9C056 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.75□□□□□ -2.53
NKX6-2Q9C056 Y_RNA.526-201ENST00000384572 110 ntBASIC-0.75□□□□□ -2.53
NKX6-2Q9C056 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.75□□□□□ -2.53
NKX6-2Q9C056 MIR548H5-201ENST00000580314 60 ntBASIC-0.75□□□□□ -2.53
NKX6-2Q9C056 AL590491.3-201ENST00000610731 82 ntBASIC-0.75□□□□□ -2.53
NKX6-2Q9C056 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.75□□□□□ -2.53
NKX6-2Q9C056 MIR101-1-201ENST00000362265 75 ntBASIC-0.76□□□□□ -2.53
NKX6-2Q9C056 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.76□□□□□ -2.53
NKX6-2Q9C056 RNU2-55P-201ENST00000411146 174 ntBASIC-0.76□□□□□ -2.53
NKX6-2Q9C056 RNU7-35P-201ENST00000517174 62 ntBASIC-0.76□□□□□ -2.53
NKX6-2Q9C056 AC040926.1-201ENST00000530195 238 ntBASIC-0.76□□□□□ -2.53
NKX6-2Q9C056 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.76□□□□□ -2.53
NKX6-2Q9C056 MIR4473-201ENST00000583731 91 ntBASIC-0.76□□□□□ -2.53
NKX6-2Q9C056 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.76□□□□□ -2.53
NKX6-2Q9C056 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.76□□□□□ -2.53
NKX6-2Q9C056 AC084781.2-201ENST00000615568 161 ntBASIC-0.76□□□□□ -2.53
NKX6-2Q9C056 SNORA25.1-201ENST00000362326 128 ntBASIC-0.77□□□□□ -2.53
NKX6-2Q9C056 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.77□□□□□ -2.53
NKX6-2Q9C056 RNU6-865P-201ENST00000364772 107 ntBASIC-0.77□□□□□ -2.53
NKX6-2Q9C056 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.77□□□□□ -2.53
NKX6-2Q9C056 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.77□□□□□ -2.53
NKX6-2Q9C056 SNORA32-201ENST00000384072 121 ntBASIC-0.77□□□□□ -2.53
NKX6-2Q9C056 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.77□□□□□ -2.53
NKX6-2Q9C056 MIR599-201ENST00000385069 95 ntBASIC-0.77□□□□□ -2.53
NKX6-2Q9C056 MT-TT-201ENST00000387460 66 ntBASIC-0.77□□□□□ -2.53
NKX6-2Q9C056 AC098479.1-201ENST00000609225 154 ntBASIC-0.77□□□□□ -2.53
NKX6-2Q9C056 AC025253.1-201ENST00000613623 543 ntBASIC-0.77□□□□□ -2.53
NKX6-2Q9C056 SNORA25.7-201ENST00000364375 127 ntBASIC-0.78□□□□□ -2.53
NKX6-2Q9C056 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.78□□□□□ -2.53
NKX6-2Q9C056 AL731563.1-201ENST00000442202 214 ntBASIC-0.78□□□□□ -2.53
NKX6-2Q9C056 RNU7-188P-201ENST00000517063 64 ntBASIC-0.78□□□□□ -2.53
NKX6-2Q9C056 MIR5688-201ENST00000580619 83 ntBASIC-0.78□□□□□ -2.53
NKX6-2Q9C056 AC080013.6-201ENST00000606185 215 ntBASIC-0.78□□□□□ -2.53
NKX6-2Q9C056 RNA5SP257-201ENST00000363023 116 ntBASIC-0.79□□□□□ -2.54
NKX6-2Q9C056 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.79□□□□□ -2.54
NKX6-2Q9C056 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.79□□□□□ -2.54
NKX6-2Q9C056 RNU1-115P-201ENST00000365329 160 ntBASIC-0.79□□□□□ -2.54
NKX6-2Q9C056 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.79□□□□□ -2.54
NKX6-2Q9C056 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.79□□□□□ -2.54
NKX6-2Q9C056 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.79□□□□□ -2.54
NKX6-2Q9C056 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.79□□□□□ -2.54
NKX6-2Q9C056 SNRPGP8-201ENST00000454064 226 ntBASIC-0.79□□□□□ -2.54
NKX6-2Q9C056 RNU7-137P-201ENST00000516788 62 ntBASIC-0.79□□□□□ -2.54
NKX6-2Q9C056 Y_RNA.718-201ENST00000517110 102 ntBASIC-0.79□□□□□ -2.54
NKX6-2Q9C056 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.79□□□□□ -2.54
NKX6-2Q9C056 snoU18.1-201ENST00000629629 71 ntBASIC-0.79□□□□□ -2.54
NKX6-2Q9C056 AC112487.2-201ENST00000637950 304 ntBASIC-0.79□□□□□ -2.54
NKX6-2Q9C056 RNU6-623P-201ENST00000363143 105 ntBASIC-0.8□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 220.4 ms