Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 U2.1-201ENST00000618978 145 ntBASIC-1.06□□□□□ -2.58
UPF3BQ9BZI7 Y_RNA.14-201ENST00000362415 103 ntBASIC-1.07□□□□□ -2.58
UPF3BQ9BZI7 Y_RNA.66-201ENST00000362862 102 ntBASIC-1.07□□□□□ -2.58
UPF3BQ9BZI7 RNU4-80P-201ENST00000363200 141 ntBASIC-1.07□□□□□ -2.58
UPF3BQ9BZI7 RNY3P11-201ENST00000364153 102 ntBASIC-1.07□□□□□ -2.58
UPF3BQ9BZI7 RNU4-36P-201ENST00000364294 144 ntBASIC-1.07□□□□□ -2.58
UPF3BQ9BZI7 SNORD115-44-201ENST00000365391 82 ntBASIC-1.07□□□□□ -2.58
UPF3BQ9BZI7 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.07□□□□□ -2.58
UPF3BQ9BZI7 MIR517B-201ENST00000385102 67 ntBASIC-1.07□□□□□ -2.58
UPF3BQ9BZI7 Y_RNA.599-201ENST00000410489 109 ntBASIC-1.07□□□□□ -2.58
UPF3BQ9BZI7 RNU7-110P-201ENST00000516891 62 ntBASIC-1.07□□□□□ -2.58
UPF3BQ9BZI7 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.08□□□□□ -2.58
UPF3BQ9BZI7 Y_RNA.605-201ENST00000410577 105 ntBASIC-1.08□□□□□ -2.58
UPF3BQ9BZI7 MTND1P1-201ENST00000445453 368 ntBASIC-1.08□□□□□ -2.58
UPF3BQ9BZI7 AC107399.1-201ENST00000451226 265 ntBASIC-1.08□□□□□ -2.58
UPF3BQ9BZI7 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.08□□□□□ -2.58
UPF3BQ9BZI7 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.08□□□□□ -2.58
UPF3BQ9BZI7 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-1.08□□□□□ -2.58
UPF3BQ9BZI7 SNORA22.1-201ENST00000362701 134 ntBASIC-1.09□□□□□ -2.58
UPF3BQ9BZI7 SNORD115-2-201ENST00000362842 82 ntBASIC-1.09□□□□□ -2.58
UPF3BQ9BZI7 Y_RNA.88-201ENST00000363029 99 ntBASIC-1.09□□□□□ -2.58
UPF3BQ9BZI7 SNORA20-201ENST00000384662 132 ntBASIC-1.09□□□□□ -2.58
UPF3BQ9BZI7 SNORA27.4-201ENST00000516650 95 ntBASIC-1.09□□□□□ -2.58
UPF3BQ9BZI7 AC138305.3-201ENST00000624988 240 ntBASIC-1.09□□□□□ -2.58
UPF3BQ9BZI7 MTND5P18-201ENST00000445624 1801 ntBASIC-1.1□□□□□ -2.59
UPF3BQ9BZI7 RNU4-16P-201ENST00000364737 141 ntBASIC-1.1□□□□□ -2.59
UPF3BQ9BZI7 Y_RNA.383-201ENST00000383855 97 ntBASIC-1.1□□□□□ -2.59
UPF3BQ9BZI7 MIR628-201ENST00000385229 95 ntBASIC-1.1□□□□□ -2.59
UPF3BQ9BZI7 RNU7-80P-201ENST00000459562 61 ntBASIC-1.1□□□□□ -2.59
UPF3BQ9BZI7 AC021146.6-201ENST00000514659 117 ntBASIC-1.1□□□□□ -2.59
UPF3BQ9BZI7 MTCO2P24-201ENST00000515611 426 ntBASIC-1.1□□□□□ -2.59
UPF3BQ9BZI7 RNU6-397P-201ENST00000516226 104 ntBASIC-1.1□□□□□ -2.59
UPF3BQ9BZI7 RNA5SP33-201ENST00000516687 98 ntBASIC-1.1□□□□□ -2.59
UPF3BQ9BZI7 RNU6-264P-201ENST00000517134 104 ntBASIC-1.1□□□□□ -2.59
UPF3BQ9BZI7 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-1.1□□□□□ -2.59
UPF3BQ9BZI7 Y_RNA.804-201ENST00000615262 101 ntBASIC-1.1□□□□□ -2.59
UPF3BQ9BZI7 AC091932.4-201ENST00000623386 200 ntBASIC-1.1□□□□□ -2.59
UPF3BQ9BZI7 U6.109-201ENST00000636749 87 ntBASIC-1.1□□□□□ -2.59
UPF3BQ9BZI7 MIR365A-201ENST00000362260 87 ntBASIC-1.11□□□□□ -2.59
UPF3BQ9BZI7 RNU6-431P-201ENST00000383874 107 ntBASIC-1.11□□□□□ -2.59
UPF3BQ9BZI7 Y_RNA.402-201ENST00000383972 102 ntBASIC-1.11□□□□□ -2.59
UPF3BQ9BZI7 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.11□□□□□ -2.59
UPF3BQ9BZI7 SNORD64-201ENST00000386683 67 ntBASIC-1.11□□□□□ -2.59
UPF3BQ9BZI7 RNU6-763P-201ENST00000390865 106 ntBASIC-1.11□□□□□ -2.59
UPF3BQ9BZI7 RNU6-175P-201ENST00000516896 107 ntBASIC-1.11□□□□□ -2.59
UPF3BQ9BZI7 RNU6-1213P-201ENST00000517075 94 ntBASIC-1.11□□□□□ -2.59
UPF3BQ9BZI7 AC140658.3-201ENST00000567603 271 ntBASIC-1.11□□□□□ -2.59
UPF3BQ9BZI7 MIR548H5-201ENST00000580314 60 ntBASIC-1.11□□□□□ -2.59
UPF3BQ9BZI7 AL669831.3-213ENST00000636676 183 ntBASIC-1.11□□□□□ -2.59
UPF3BQ9BZI7 MIR376A2-201ENST00000636782 80 ntBASIC-1.11□□□□□ -2.59
UPF3BQ9BZI7 Y_RNA.454-201ENST00000384224 113 ntBASIC-1.12□□□□□ -2.59
UPF3BQ9BZI7 SCARNA18B-201ENST00000458806 135 ntBASIC-1.12□□□□□ -2.59
UPF3BQ9BZI7 RN7SKP19-201ENST00000516016 252 ntBASIC-1.12□□□□□ -2.59
UPF3BQ9BZI7 RNU7-79P-201ENST00000516082 62 ntBASIC-1.12□□□□□ -2.59
UPF3BQ9BZI7 RNU6-191P-201ENST00000516295 94 ntBASIC-1.12□□□□□ -2.59
UPF3BQ9BZI7 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.12□□□□□ -2.59
UPF3BQ9BZI7 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-1.12□□□□□ -2.59
UPF3BQ9BZI7 MIR367-201ENST00000362299 68 ntBASIC-1.13□□□□□ -2.59
UPF3BQ9BZI7 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.13□□□□□ -2.59
UPF3BQ9BZI7 RNU6-449P-201ENST00000383914 107 ntBASIC-1.13□□□□□ -2.59
UPF3BQ9BZI7 SNORD63-201ENST00000384262 68 ntBASIC-1.13□□□□□ -2.59
UPF3BQ9BZI7 Y_RNA.559-201ENST00000384686 107 ntBASIC-1.13□□□□□ -2.59
UPF3BQ9BZI7 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-1.13□□□□□ -2.59
UPF3BQ9BZI7 RNA5SP461-201ENST00000516451 104 ntBASIC-1.13□□□□□ -2.59
UPF3BQ9BZI7 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-1.13□□□□□ -2.59
UPF3BQ9BZI7 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.13□□□□□ -2.59
UPF3BQ9BZI7 MIR3179-1-201ENST00000578940 84 ntBASIC-1.13□□□□□ -2.59
UPF3BQ9BZI7 MIR3179-2-201ENST00000579107 84 ntBASIC-1.13□□□□□ -2.59
UPF3BQ9BZI7 MIR3179-3-201ENST00000579566 84 ntBASIC-1.13□□□□□ -2.59
UPF3BQ9BZI7 MIR4473-201ENST00000583731 91 ntBASIC-1.13□□□□□ -2.59
UPF3BQ9BZI7 MIR6851-201ENST00000617060 67 ntBASIC-1.13□□□□□ -2.59
UPF3BQ9BZI7 MIR3179-4-201ENST00000617599 84 ntBASIC-1.13□□□□□ -2.59
UPF3BQ9BZI7 AC021613.1-201ENST00000623880 111 ntBASIC-1.13□□□□□ -2.59
UPF3BQ9BZI7 RNY4P14-201ENST00000363656 96 ntBASIC-1.14□□□□□ -2.59
UPF3BQ9BZI7 RNU6-21P-201ENST00000384710 107 ntBASIC-1.14□□□□□ -2.59
UPF3BQ9BZI7 RNU6-510P-201ENST00000391239 108 ntBASIC-1.14□□□□□ -2.59
UPF3BQ9BZI7 snoU13.13-201ENST00000458842 104 ntBASIC-1.14□□□□□ -2.59
UPF3BQ9BZI7 SNORD22.1-201ENST00000516331 125 ntBASIC-1.14□□□□□ -2.59
UPF3BQ9BZI7 MIR4724-201ENST00000579485 89 ntBASIC-1.14□□□□□ -2.59
UPF3BQ9BZI7 MIR5704-201ENST00000584029 77 ntBASIC-1.14□□□□□ -2.59
UPF3BQ9BZI7 Y_RNA.772-201ENST00000606692 102 ntBASIC-1.14□□□□□ -2.59
UPF3BQ9BZI7 AC013791.1-201ENST00000616619 62 ntBASIC-1.14□□□□□ -2.59
UPF3BQ9BZI7 Y_RNA.89-201ENST00000363031 102 ntBASIC-1.15□□□□□ -2.59
UPF3BQ9BZI7 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.15□□□□□ -2.59
UPF3BQ9BZI7 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.15□□□□□ -2.59
UPF3BQ9BZI7 MIR181B2-201ENST00000385004 89 ntBASIC-1.15□□□□□ -2.59
UPF3BQ9BZI7 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-1.15□□□□□ -2.59
UPF3BQ9BZI7 Y_RNA.655-201ENST00000515919 96 ntBASIC-1.15□□□□□ -2.59
UPF3BQ9BZI7 AC040926.1-201ENST00000530195 238 ntBASIC-1.15□□□□□ -2.59
UPF3BQ9BZI7 U4.1-201ENST00000620349 87 ntBASIC-1.15□□□□□ -2.59
UPF3BQ9BZI7 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-1.15□□□□□ -2.59
UPF3BQ9BZI7 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.16□□□□□ -2.6
UPF3BQ9BZI7 RNY1P2-201ENST00000364820 117 ntBASIC-1.16□□□□□ -2.6
UPF3BQ9BZI7 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.16□□□□□ -2.6
UPF3BQ9BZI7 RNU6-901P-201ENST00000384593 106 ntBASIC-1.16□□□□□ -2.6
UPF3BQ9BZI7 MIR599-201ENST00000385069 95 ntBASIC-1.16□□□□□ -2.6
UPF3BQ9BZI7 AL603914.1-201ENST00000401964 204 ntBASIC-1.16□□□□□ -2.6
UPF3BQ9BZI7 RNU6-314P-201ENST00000516574 104 ntBASIC-1.16□□□□□ -2.6
UPF3BQ9BZI7 RNU7-35P-201ENST00000517174 62 ntBASIC-1.16□□□□□ -2.6
UPF3BQ9BZI7 MIR3115-201ENST00000577915 68 ntBASIC-1.16□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms