Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 SNORA20-201ENST00000384662 132 ntBASIC0.24□□□□□ -2.37
NDUFAF3Q9BU61 Y_RNA.567-201ENST00000384736 106 ntBASIC0.24□□□□□ -2.37
NDUFAF3Q9BU61 MTATP8P1-201ENST00000467115 207 ntBASIC0.24□□□□□ -2.37
NDUFAF3Q9BU61 RNU6-1153P-201ENST00000516760 105 ntBASIC0.24□□□□□ -2.37
NDUFAF3Q9BU61 RNU7-70P-201ENST00000516941 66 ntBASIC0.24□□□□□ -2.37
NDUFAF3Q9BU61 SNORA25.18-201ENST00000607153 114 ntBASIC0.24□□□□□ -2.37
NDUFAF3Q9BU61 MIR8087-201ENST00000612745 78 ntBASIC0.24□□□□□ -2.37
NDUFAF3Q9BU61 MIR8066-201ENST00000617280 78 ntBASIC0.24□□□□□ -2.37
NDUFAF3Q9BU61 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.24□□□□□ -2.37
NDUFAF3Q9BU61 MIR330-201ENST00000362196 94 ntBASIC0.23□□□□□ -2.37
NDUFAF3Q9BU61 Y_RNA.262-201ENST00000364641 102 ntBASIC0.23□□□□□ -2.37
NDUFAF3Q9BU61 RNU6-597P-201ENST00000365620 102 ntBASIC0.23□□□□□ -2.37
NDUFAF3Q9BU61 Y_RNA.461-201ENST00000384263 103 ntBASIC0.23□□□□□ -2.37
NDUFAF3Q9BU61 Y_RNA.483-201ENST00000384380 101 ntBASIC0.23□□□□□ -2.37
NDUFAF3Q9BU61 MT-TW-201ENST00000387382 68 ntBASIC0.23□□□□□ -2.37
NDUFAF3Q9BU61 SNRPGP12-201ENST00000449481 213 ntBASIC0.23□□□□□ -2.37
NDUFAF3Q9BU61 AC133485.4-201ENST00000561835 220 ntBASIC0.23□□□□□ -2.37
NDUFAF3Q9BU61 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
NDUFAF3Q9BU61 RNU6-403P-201ENST00000363163 104 ntBASIC0.22□□□□□ -2.37
NDUFAF3Q9BU61 SNORD118-201ENST00000363593 134 ntBASIC0.22□□□□□ -2.37
NDUFAF3Q9BU61 RNU6-103P-201ENST00000363686 107 ntBASIC0.22□□□□□ -2.37
NDUFAF3Q9BU61 RNA5SP325-201ENST00000363756 130 ntBASIC0.22□□□□□ -2.37
NDUFAF3Q9BU61 SNORA8.2-201ENST00000384372 139 ntBASIC0.22□□□□□ -2.37
NDUFAF3Q9BU61 AC108740.1-201ENST00000498629 225 ntBASIC0.22□□□□□ -2.37
NDUFAF3Q9BU61 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.22□□□□□ -2.37
NDUFAF3Q9BU61 RNU6-469P-201ENST00000516253 101 ntBASIC0.22□□□□□ -2.37
NDUFAF3Q9BU61 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
NDUFAF3Q9BU61 AL365205.2-201ENST00000594586 68 ntBASIC0.22□□□□□ -2.37
NDUFAF3Q9BU61 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.22□□□□□ -2.37
NDUFAF3Q9BU61 Y_RNA.42-201ENST00000362660 108 ntBASIC0.21□□□□□ -2.38
NDUFAF3Q9BU61 RNU6-716P-201ENST00000365621 103 ntBASIC0.21□□□□□ -2.38
NDUFAF3Q9BU61 U8.15-201ENST00000390947 134 ntBASIC0.21□□□□□ -2.38
NDUFAF3Q9BU61 RNU4-43P-201ENST00000410628 137 ntBASIC0.21□□□□□ -2.38
NDUFAF3Q9BU61 Y_RNA.617-201ENST00000410920 90 ntBASIC0.21□□□□□ -2.38
NDUFAF3Q9BU61 AL121914.1-201ENST00000450188 156 ntBASIC0.21□□□□□ -2.38
NDUFAF3Q9BU61 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.21□□□□□ -2.38
NDUFAF3Q9BU61 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.21□□□□□ -2.38
NDUFAF3Q9BU61 Y_RNA.13-201ENST00000362403 112 ntBASIC0.2□□□□□ -2.38
NDUFAF3Q9BU61 SNORA22.1-201ENST00000362701 134 ntBASIC0.2□□□□□ -2.38
NDUFAF3Q9BU61 RNA5SP62-201ENST00000363457 110 ntBASIC0.2□□□□□ -2.38
NDUFAF3Q9BU61 AL358176.2-201ENST00000425769 204 ntBASIC0.2□□□□□ -2.38
NDUFAF3Q9BU61 Y_RNA.720-201ENST00000517166 92 ntBASIC0.2□□□□□ -2.38
NDUFAF3Q9BU61 AP003327.1-201ENST00000529684 127 ntBASIC0.2□□□□□ -2.38
NDUFAF3Q9BU61 AC141846.1-201ENST00000568348 142 ntBASIC0.2□□□□□ -2.38
NDUFAF3Q9BU61 MIR4744-201ENST00000581563 82 ntBASIC0.2□□□□□ -2.38
NDUFAF3Q9BU61 MIR6082-201ENST00000613604 109 ntBASIC0.2□□□□□ -2.38
NDUFAF3Q9BU61 AC021613.1-201ENST00000623880 111 ntBASIC0.2□□□□□ -2.38
NDUFAF3Q9BU61 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
NDUFAF3Q9BU61 Y_RNA.11-201ENST00000362375 109 ntBASIC0.19□□□□□ -2.38
NDUFAF3Q9BU61 Y_RNA.54-201ENST00000362766 105 ntBASIC0.19□□□□□ -2.38
NDUFAF3Q9BU61 Y_RNA.115-201ENST00000363272 98 ntBASIC0.19□□□□□ -2.38
NDUFAF3Q9BU61 RNA5SP457-201ENST00000363657 124 ntBASIC0.19□□□□□ -2.38
NDUFAF3Q9BU61 Y_RNA.352-201ENST00000365439 102 ntBASIC0.19□□□□□ -2.38
NDUFAF3Q9BU61 Y_RNA.574-201ENST00000384766 95 ntBASIC0.19□□□□□ -2.38
NDUFAF3Q9BU61 MIR644A-201ENST00000385262 94 ntBASIC0.19□□□□□ -2.38
NDUFAF3Q9BU61 AL512326.2-201ENST00000426359 151 ntBASIC0.19□□□□□ -2.38
NDUFAF3Q9BU61 SNORD116-25-201ENST00000516517 92 ntBASIC0.19□□□□□ -2.38
NDUFAF3Q9BU61 RNA5SP330-201ENST00000517096 96 ntBASIC0.19□□□□□ -2.38
NDUFAF3Q9BU61 MIR4643-201ENST00000577473 78 ntBASIC0.19□□□□□ -2.38
NDUFAF3Q9BU61 MIR4514-201ENST00000581410 57 ntBASIC0.19□□□□□ -2.38
NDUFAF3Q9BU61 AL442067.1-201ENST00000613261 223 ntBASIC0.19□□□□□ -2.38
NDUFAF3Q9BU61 Y_RNA.85-201ENST00000363014 111 ntBASIC0.18□□□□□ -2.38
NDUFAF3Q9BU61 Y_RNA.277-201ENST00000364754 102 ntBASIC0.18□□□□□ -2.38
NDUFAF3Q9BU61 MIR378D2-201ENST00000580636 98 ntBASIC0.18□□□□□ -2.38
NDUFAF3Q9BU61 AC006504.6-201ENST00000590142 199 ntBASIC0.18□□□□□ -2.38
NDUFAF3Q9BU61 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
NDUFAF3Q9BU61 MIR6841-201ENST00000637129 72 ntBASIC0.18□□□□□ -2.38
NDUFAF3Q9BU61 RNU6-349P-201ENST00000362402 107 ntBASIC0.17□□□□□ -2.38
NDUFAF3Q9BU61 SNORA36.1-201ENST00000363424 132 ntBASIC0.17□□□□□ -2.38
NDUFAF3Q9BU61 Y_RNA.292-201ENST00000364904 97 ntBASIC0.17□□□□□ -2.38
NDUFAF3Q9BU61 SNORA72.6-201ENST00000384520 129 ntBASIC0.17□□□□□ -2.38
NDUFAF3Q9BU61 RNA5SP127-201ENST00000411051 133 ntBASIC0.17□□□□□ -2.38
NDUFAF3Q9BU61 AP003072.1-201ENST00000531740 145 ntBASIC0.17□□□□□ -2.38
NDUFAF3Q9BU61 MIR4491-201ENST00000581087 68 ntBASIC0.17□□□□□ -2.38
NDUFAF3Q9BU61 AC023932.2-201ENST00000603176 175 ntBASIC0.17□□□□□ -2.38
NDUFAF3Q9BU61 AC078938.1-201ENST00000620993 318 ntBASIC0.17□□□□□ -2.38
NDUFAF3Q9BU61 Y_RNA.76-201ENST00000362931 109 ntBASIC0.16□□□□□ -2.38
NDUFAF3Q9BU61 RNU6-472P-201ENST00000384299 107 ntBASIC0.16□□□□□ -2.38
NDUFAF3Q9BU61 Y_RNA.518-201ENST00000384552 113 ntBASIC0.16□□□□□ -2.38
NDUFAF3Q9BU61 Y_RNA.588-201ENST00000391254 102 ntBASIC0.16□□□□□ -2.38
NDUFAF3Q9BU61 AC073261.1-201ENST00000429409 121 ntBASIC0.16□□□□□ -2.38
NDUFAF3Q9BU61 RNU6-863P-201ENST00000515989 104 ntBASIC0.16□□□□□ -2.38
NDUFAF3Q9BU61 RNU4-67P-201ENST00000364569 141 ntBASIC0.15□□□□□ -2.39
NDUFAF3Q9BU61 Y_RNA.258-201ENST00000364613 105 ntBASIC0.15□□□□□ -2.39
NDUFAF3Q9BU61 RNU6-949P-201ENST00000384040 107 ntBASIC0.15□□□□□ -2.39
NDUFAF3Q9BU61 SNORA18-201ENST00000384416 132 ntBASIC0.15□□□□□ -2.39
NDUFAF3Q9BU61 RNU6-578P-201ENST00000390980 103 ntBASIC0.15□□□□□ -2.39
NDUFAF3Q9BU61 MIR1197-201ENST00000408818 88 ntBASIC0.15□□□□□ -2.39
NDUFAF3Q9BU61 RNU6-893P-201ENST00000458841 100 ntBASIC0.15□□□□□ -2.39
NDUFAF3Q9BU61 RNU6-765P-201ENST00000516916 99 ntBASIC0.15□□□□□ -2.39
NDUFAF3Q9BU61 MIR4431-201ENST00000579990 94 ntBASIC0.15□□□□□ -2.39
NDUFAF3Q9BU61 AC011921.3-201ENST00000605540 361 ntBASIC0.15□□□□□ -2.39
NDUFAF3Q9BU61 Y_RNA.32-201ENST00000362589 110 ntBASIC0.14□□□□□ -2.39
NDUFAF3Q9BU61 RNU6-1099P-201ENST00000363533 107 ntBASIC0.14□□□□□ -2.39
NDUFAF3Q9BU61 Y_RNA.174-201ENST00000363781 105 ntBASIC0.14□□□□□ -2.39
NDUFAF3Q9BU61 RNU6-978P-201ENST00000364371 103 ntBASIC0.14□□□□□ -2.39
NDUFAF3Q9BU61 RNU4-16P-201ENST00000364737 141 ntBASIC0.14□□□□□ -2.39
NDUFAF3Q9BU61 Y_RNA.308-201ENST00000365043 101 ntBASIC0.14□□□□□ -2.39
NDUFAF3Q9BU61 Y_RNA.396-201ENST00000383949 103 ntBASIC0.14□□□□□ -2.39
NDUFAF3Q9BU61 RNU6-815P-201ENST00000384080 113 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms