Protein–RNA interactions for Protein: Q99687

MEIS3, Homeobox protein Meis3, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3Q99687 Y_RNA.531-201ENST00000384589 121 ntBASIC1.41□□□□□ -2.18
MEIS3Q99687 MIR548D2-201ENST00000384955 97 ntBASIC1.41□□□□□ -2.18
MEIS3Q99687 RNU6-360P-201ENST00000390944 104 ntBASIC1.41□□□□□ -2.18
MEIS3Q99687 AC107297.1-201ENST00000459991 176 ntBASIC1.41□□□□□ -2.18
MEIS3Q99687 TRMT112P2-201ENST00000512910 132 ntBASIC1.41□□□□□ -2.18
MEIS3Q99687 RNA5SP445-201ENST00000515889 115 ntBASIC1.41□□□□□ -2.18
MEIS3Q99687 SNORA74.3-201ENST00000517108 154 ntBASIC1.41□□□□□ -2.18
MEIS3Q99687 AL020996.3-201ENST00000606617 222 ntBASIC1.41□□□□□ -2.18
MEIS3Q99687 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
MEIS3Q99687 SNORA22.1-201ENST00000362701 134 ntBASIC1.4□□□□□ -2.19
MEIS3Q99687 Y_RNA.163-201ENST00000363702 113 ntBASIC1.4□□□□□ -2.19
MEIS3Q99687 U8.6-201ENST00000364939 135 ntBASIC1.4□□□□□ -2.19
MEIS3Q99687 SNORA1.2-201ENST00000365189 134 ntBASIC1.4□□□□□ -2.19
MEIS3Q99687 AL161935.2-201ENST00000414627 60 ntBASIC1.4□□□□□ -2.19
MEIS3Q99687 AL591704.2-201ENST00000421658 181 ntBASIC1.4□□□□□ -2.19
MEIS3Q99687 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.4□□□□□ -2.19
MEIS3Q99687 RNU7-113P-201ENST00000459273 62 ntBASIC1.4□□□□□ -2.19
MEIS3Q99687 AC005908.1-201ENST00000468701 347 ntBASIC1.4□□□□□ -2.19
MEIS3Q99687 SNORA44.1-201ENST00000517031 108 ntBASIC1.4□□□□□ -2.19
MEIS3Q99687 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.4□□□□□ -2.19
MEIS3Q99687 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.4□□□□□ -2.19
MEIS3Q99687 MIR4764-201ENST00000580680 88 ntBASIC1.4□□□□□ -2.19
MEIS3Q99687 MIR548AE2-201ENST00000583456 67 ntBASIC1.4□□□□□ -2.19
MEIS3Q99687 AC103810.8-201ENST00000607347 118 ntBASIC1.4□□□□□ -2.19
MEIS3Q99687 MIR6717-201ENST00000622747 73 ntBASIC1.4□□□□□ -2.19
MEIS3Q99687 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
MEIS3Q99687 RNY4P6-201ENST00000363667 96 ntBASIC1.39□□□□□ -2.19
MEIS3Q99687 RNU6-756P-201ENST00000383997 107 ntBASIC1.39□□□□□ -2.19
MEIS3Q99687 SNORA24-201ENST00000384096 131 ntBASIC1.39□□□□□ -2.19
MEIS3Q99687 SNORA51.5-201ENST00000384126 131 ntBASIC1.39□□□□□ -2.19
MEIS3Q99687 MIR520C-201ENST00000385005 87 ntBASIC1.39□□□□□ -2.19
MEIS3Q99687 MIR513A1-201ENST00000385138 129 ntBASIC1.39□□□□□ -2.19
MEIS3Q99687 RNU6-1319P-201ENST00000390855 104 ntBASIC1.39□□□□□ -2.19
MEIS3Q99687 RNU6-747P-201ENST00000390928 104 ntBASIC1.39□□□□□ -2.19
MEIS3Q99687 RNU6-241P-201ENST00000391148 104 ntBASIC1.39□□□□□ -2.19
MEIS3Q99687 RNU6-177P-201ENST00000411257 104 ntBASIC1.39□□□□□ -2.19
MEIS3Q99687 AL022718.1-201ENST00000412004 84 ntBASIC1.39□□□□□ -2.19
MEIS3Q99687 AC068339.1-201ENST00000526965 141 ntBASIC1.39□□□□□ -2.19
MEIS3Q99687 MIR3198-2-201ENST00000577868 80 ntBASIC1.39□□□□□ -2.19
MEIS3Q99687 MIR548AO-201ENST00000579992 96 ntBASIC1.39□□□□□ -2.19
MEIS3Q99687 AC008133.2-201ENST00000624540 351 ntBASIC1.39□□□□□ -2.19
MEIS3Q99687 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.39□□□□□ -2.19
MEIS3Q99687 AL589743.1-201ENST00000551932 2712 ntBASIC1.39□□□□□ -2.19
MEIS3Q99687 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.39□□□□□ -2.19
MEIS3Q99687 SNORA1.1-201ENST00000364671 133 ntBASIC1.38□□□□□ -2.19
MEIS3Q99687 RNU6-342P-201ENST00000384521 104 ntBASIC1.38□□□□□ -2.19
MEIS3Q99687 MIR590-201ENST00000385008 97 ntBASIC1.38□□□□□ -2.19
MEIS3Q99687 SNORD41-201ENST00000386967 70 ntBASIC1.38□□□□□ -2.19
MEIS3Q99687 MIR759-201ENST00000390224 91 ntBASIC1.38□□□□□ -2.19
MEIS3Q99687 RNU6-816P-201ENST00000390914 107 ntBASIC1.38□□□□□ -2.19
MEIS3Q99687 RNU6-1268P-201ENST00000391214 107 ntBASIC1.38□□□□□ -2.19
MEIS3Q99687 RNU6-1239P-201ENST00000391310 107 ntBASIC1.38□□□□□ -2.19
MEIS3Q99687 HSPE1P24-201ENST00000450782 238 ntBASIC1.38□□□□□ -2.19
MEIS3Q99687 RPS23P4-201ENST00000487908 423 ntBASIC1.38□□□□□ -2.19
MEIS3Q99687 AC113410.1-201ENST00000505029 247 ntBASIC1.38□□□□□ -2.19
MEIS3Q99687 AC008834.1-201ENST00000511612 175 ntBASIC1.38□□□□□ -2.19
MEIS3Q99687 RNU6-412P-201ENST00000516434 106 ntBASIC1.38□□□□□ -2.19
MEIS3Q99687 RNA5SP33-201ENST00000516687 98 ntBASIC1.38□□□□□ -2.19
MEIS3Q99687 RNU7-53P-201ENST00000516705 60 ntBASIC1.38□□□□□ -2.19
MEIS3Q99687 RNA5SP170-201ENST00000517150 101 ntBASIC1.38□□□□□ -2.19
MEIS3Q99687 RNU6-537P-201ENST00000517277 103 ntBASIC1.38□□□□□ -2.19
MEIS3Q99687 AC141557.1-201ENST00000540982 400 ntBASIC1.38□□□□□ -2.19
MEIS3Q99687 MIR5009-201ENST00000578736 100 ntBASIC1.38□□□□□ -2.19
MEIS3Q99687 MIR3163-201ENST00000581592 73 ntBASIC1.38□□□□□ -2.19
MEIS3Q99687 MIR3192-201ENST00000584920 77 ntBASIC1.38□□□□□ -2.19
MEIS3Q99687 MIR6841-201ENST00000637129 72 ntBASIC1.38□□□□□ -2.19
MEIS3Q99687 RNU6-1123P-201ENST00000362347 106 ntBASIC1.37□□□□□ -2.19
MEIS3Q99687 SNORA25.3-201ENST00000363205 127 ntBASIC1.37□□□□□ -2.19
MEIS3Q99687 RNU6-616P-201ENST00000384353 107 ntBASIC1.37□□□□□ -2.19
MEIS3Q99687 MIR605-201ENST00000385078 83 ntBASIC1.37□□□□□ -2.19
MEIS3Q99687 JTBP1-201ENST00000441314 247 ntBASIC1.37□□□□□ -2.19
MEIS3Q99687 snoU13.25-201ENST00000458945 104 ntBASIC1.37□□□□□ -2.19
MEIS3Q99687 SNORA77B-201ENST00000578179 125 ntBASIC1.37□□□□□ -2.19
MEIS3Q99687 Y_RNA.323-201ENST00000365157 109 ntBASIC1.36□□□□□ -2.19
MEIS3Q99687 Y_RNA.328-201ENST00000365208 113 ntBASIC1.36□□□□□ -2.19
MEIS3Q99687 RNU6-32P-201ENST00000383948 107 ntBASIC1.36□□□□□ -2.19
MEIS3Q99687 RNU6-13P-201ENST00000384248 107 ntBASIC1.36□□□□□ -2.19
MEIS3Q99687 RNU6-12P-201ENST00000384604 107 ntBASIC1.36□□□□□ -2.19
MEIS3Q99687 RNU6-41P-201ENST00000384741 107 ntBASIC1.36□□□□□ -2.19
MEIS3Q99687 RNU6-1237P-201ENST00000384777 107 ntBASIC1.36□□□□□ -2.19
MEIS3Q99687 MIR30A-201ENST00000385092 71 ntBASIC1.36□□□□□ -2.19
MEIS3Q99687 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
MEIS3Q99687 MIR934-201ENST00000401241 83 ntBASIC1.36□□□□□ -2.19
MEIS3Q99687 MIR1285-1-201ENST00000408593 84 ntBASIC1.36□□□□□ -2.19
MEIS3Q99687 RNY4P30-201ENST00000410216 95 ntBASIC1.36□□□□□ -2.19
MEIS3Q99687 SNORA7.5-201ENST00000410672 110 ntBASIC1.36□□□□□ -2.19
MEIS3Q99687 AL353813.1-201ENST00000440700 253 ntBASIC1.36□□□□□ -2.19
MEIS3Q99687 RPL39P25-201ENST00000449384 154 ntBASIC1.36□□□□□ -2.19
MEIS3Q99687 RNU7-73P-201ENST00000458743 63 ntBASIC1.36□□□□□ -2.19
MEIS3Q99687 RNU6-947P-201ENST00000516264 106 ntBASIC1.36□□□□□ -2.19
MEIS3Q99687 MIR8055-201ENST00000610739 97 ntBASIC1.36□□□□□ -2.19
MEIS3Q99687 RNU6-1255P-201ENST00000363434 112 ntBASIC1.35□□□□□ -2.19
MEIS3Q99687 Y_RNA.348-201ENST00000365403 103 ntBASIC1.35□□□□□ -2.19
MEIS3Q99687 SNORA70.7-201ENST00000384159 133 ntBASIC1.35□□□□□ -2.19
MEIS3Q99687 Y_RNA.537-201ENST00000384626 109 ntBASIC1.35□□□□□ -2.19
MEIS3Q99687 MIR653-201ENST00000385279 96 ntBASIC1.35□□□□□ -2.19
MEIS3Q99687 RNU6-1307P-201ENST00000391012 103 ntBASIC1.35□□□□□ -2.19
MEIS3Q99687 MIR1302-5-201ENST00000408164 150 ntBASIC1.35□□□□□ -2.19
MEIS3Q99687 RNU1-98P-201ENST00000458992 160 ntBASIC1.35□□□□□ -2.19
MEIS3Q99687 Y_RNA.677-201ENST00000516401 85 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms