Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 MIR378D2-201ENST00000580636 98 ntBASIC0.53□□□□□ -2.32
ZNF558Q96NG5 SNORD92-201ENST00000585078 85 ntBASIC0.53□□□□□ -2.32
ZNF558Q96NG5 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.53□□□□□ -2.32
ZNF558Q96NG5 AC243829.6-201ENST00000612652 106 ntBASIC0.53□□□□□ -2.32
ZNF558Q96NG5 Y_RNA.115-201ENST00000363272 98 ntBASIC0.52□□□□□ -2.33
ZNF558Q96NG5 RNA5SP457-201ENST00000363657 124 ntBASIC0.52□□□□□ -2.33
ZNF558Q96NG5 RNY1P8-201ENST00000383970 114 ntBASIC0.52□□□□□ -2.33
ZNF558Q96NG5 SNORD100-201ENST00000408573 76 ntBASIC0.52□□□□□ -2.33
ZNF558Q96NG5 RNU7-45P-201ENST00000459460 63 ntBASIC0.52□□□□□ -2.33
ZNF558Q96NG5 MTND1P19-201ENST00000511780 315 ntBASIC0.52□□□□□ -2.33
ZNF558Q96NG5 AC090897.1-201ENST00000580909 226 ntBASIC0.52□□□□□ -2.33
ZNF558Q96NG5 Z83818.1-201ENST00000603584 150 ntBASIC0.52□□□□□ -2.33
ZNF558Q96NG5 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.52□□□□□ -2.33
ZNF558Q96NG5 Y_RNA.20-201ENST00000362479 113 ntBASIC0.51□□□□□ -2.33
ZNF558Q96NG5 RNU6-447P-201ENST00000410293 104 ntBASIC0.51□□□□□ -2.33
ZNF558Q96NG5 RNU6-1118P-201ENST00000410382 104 ntBASIC0.51□□□□□ -2.33
ZNF558Q96NG5 RNU6-1076P-201ENST00000410397 104 ntBASIC0.51□□□□□ -2.33
ZNF558Q96NG5 RNU6-355P-201ENST00000410427 104 ntBASIC0.51□□□□□ -2.33
ZNF558Q96NG5 RNU6-791P-201ENST00000410467 104 ntBASIC0.51□□□□□ -2.33
ZNF558Q96NG5 RNU6-705P-201ENST00000410601 104 ntBASIC0.51□□□□□ -2.33
ZNF558Q96NG5 RNU6-1100P-201ENST00000410691 104 ntBASIC0.51□□□□□ -2.33
ZNF558Q96NG5 RNU6-860P-201ENST00000410860 104 ntBASIC0.51□□□□□ -2.33
ZNF558Q96NG5 RNU6-1217P-201ENST00000411276 104 ntBASIC0.51□□□□□ -2.33
ZNF558Q96NG5 RNU6-785P-201ENST00000411324 104 ntBASIC0.51□□□□□ -2.33
ZNF558Q96NG5 MIR3152-201ENST00000579801 74 ntBASIC0.51□□□□□ -2.33
ZNF558Q96NG5 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.51□□□□□ -2.33
ZNF558Q96NG5 MIR8087-201ENST00000612745 78 ntBASIC0.51□□□□□ -2.33
ZNF558Q96NG5 U6.90-201ENST00000614007 104 ntBASIC0.51□□□□□ -2.33
ZNF558Q96NG5 U6.70-201ENST00000620287 104 ntBASIC0.51□□□□□ -2.33
ZNF558Q96NG5 MIR330-201ENST00000362196 94 ntBASIC0.5□□□□□ -2.33
ZNF558Q96NG5 Y_RNA.258-201ENST00000364613 105 ntBASIC0.5□□□□□ -2.33
ZNF558Q96NG5 Y_RNA.308-201ENST00000365043 101 ntBASIC0.5□□□□□ -2.33
ZNF558Q96NG5 RNU6-364P-201ENST00000384387 107 ntBASIC0.5□□□□□ -2.33
ZNF558Q96NG5 MIR568-201ENST00000385036 95 ntBASIC0.5□□□□□ -2.33
ZNF558Q96NG5 MIR1302-3-201ENST00000408128 138 ntBASIC0.5□□□□□ -2.33
ZNF558Q96NG5 RNU7-102P-201ENST00000458948 62 ntBASIC0.5□□□□□ -2.33
ZNF558Q96NG5 RNU6-327P-201ENST00000516270 127 ntBASIC0.5□□□□□ -2.33
ZNF558Q96NG5 RNY3P16-201ENST00000516338 101 ntBASIC0.5□□□□□ -2.33
ZNF558Q96NG5 RNU7-156P-201ENST00000517214 74 ntBASIC0.5□□□□□ -2.33
ZNF558Q96NG5 AC008608.1-201ENST00000603910 127 ntBASIC0.5□□□□□ -2.33
ZNF558Q96NG5 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.5□□□□□ -2.33
ZNF558Q96NG5 MIR6841-201ENST00000637129 72 ntBASIC0.5□□□□□ -2.33
ZNF558Q96NG5 SNORD18A-201ENST00000363753 72 ntBASIC0.49□□□□□ -2.33
ZNF558Q96NG5 VTRNA1-3-201ENST00000365645 89 ntBASIC0.49□□□□□ -2.33
ZNF558Q96NG5 Y_RNA.478-201ENST00000384358 107 ntBASIC0.49□□□□□ -2.33
ZNF558Q96NG5 Y_RNA.539-201ENST00000384635 107 ntBASIC0.49□□□□□ -2.33
ZNF558Q96NG5 MIR624-201ENST00000385217 97 ntBASIC0.49□□□□□ -2.33
ZNF558Q96NG5 MTND2P23-201ENST00000422990 651 ntBASIC0.49□□□□□ -2.33
ZNF558Q96NG5 RNU2-4P-201ENST00000606190 192 ntBASIC0.49□□□□□ -2.33
ZNF558Q96NG5 AL596211.1-201ENST00000569873 2277 ntBASIC0.49□□□□□ -2.33
ZNF558Q96NG5 Y_RNA.30-201ENST00000362572 97 ntBASIC0.48□□□□□ -2.33
ZNF558Q96NG5 RNU6-493P-201ENST00000391321 108 ntBASIC0.48□□□□□ -2.33
ZNF558Q96NG5 RNA5SP127-201ENST00000411051 133 ntBASIC0.48□□□□□ -2.33
ZNF558Q96NG5 Y_RNA.626-201ENST00000411288 95 ntBASIC0.48□□□□□ -2.33
ZNF558Q96NG5 SEPT7P4-201ENST00000437076 306 ntBASIC0.48□□□□□ -2.33
ZNF558Q96NG5 AC002350.1-201ENST00000490759 375 ntBASIC0.48□□□□□ -2.33
ZNF558Q96NG5 Y_RNA.797-201ENST00000515977 94 ntBASIC0.48□□□□□ -2.33
ZNF558Q96NG5 SCARNA15-202ENST00000516881 127 ntBASIC0.48□□□□□ -2.33
ZNF558Q96NG5 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.48□□□□□ -2.33
ZNF558Q96NG5 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.48□□□□□ -2.33
ZNF558Q96NG5 AL662814.1-201ENST00000617364 121 ntBASIC0.48□□□□□ -2.33
ZNF558Q96NG5 SNORD27-201ENST00000363981 72 ntBASIC0.47□□□□□ -2.33
ZNF558Q96NG5 Y_RNA.350-201ENST00000365409 98 ntBASIC0.47□□□□□ -2.33
ZNF558Q96NG5 Y_RNA.374-201ENST00000365606 101 ntBASIC0.47□□□□□ -2.33
ZNF558Q96NG5 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.47□□□□□ -2.33
ZNF558Q96NG5 MIR4308-201ENST00000580634 81 ntBASIC0.47□□□□□ -2.33
ZNF558Q96NG5 AC021613.1-201ENST00000623880 111 ntBASIC0.47□□□□□ -2.33
ZNF558Q96NG5 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.46□□□□□ -2.34
ZNF558Q96NG5 RNU6-716P-201ENST00000365621 103 ntBASIC0.46□□□□□ -2.34
ZNF558Q96NG5 RNU6-643P-201ENST00000384018 107 ntBASIC0.46□□□□□ -2.34
ZNF558Q96NG5 SNORA20-201ENST00000384662 132 ntBASIC0.46□□□□□ -2.34
ZNF558Q96NG5 Y_RNA.571-201ENST00000384753 98 ntBASIC0.46□□□□□ -2.34
ZNF558Q96NG5 AL157398.1-201ENST00000452981 186 ntBASIC0.46□□□□□ -2.34
ZNF558Q96NG5 RNU7-70P-201ENST00000516941 66 ntBASIC0.46□□□□□ -2.34
ZNF558Q96NG5 AL162730.1-201ENST00000605734 292 ntBASIC0.46□□□□□ -2.34
ZNF558Q96NG5 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
ZNF558Q96NG5 Y_RNA.65-201ENST00000362846 100 ntBASIC0.45□□□□□ -2.34
ZNF558Q96NG5 RNA5SP237-201ENST00000410414 113 ntBASIC0.45□□□□□ -2.34
ZNF558Q96NG5 RNU4-71P-201ENST00000516258 113 ntBASIC0.45□□□□□ -2.34
ZNF558Q96NG5 RNU6-1045P-201ENST00000516321 107 ntBASIC0.45□□□□□ -2.34
ZNF558Q96NG5 SCARNA15.1-201ENST00000516384 125 ntBASIC0.45□□□□□ -2.34
ZNF558Q96NG5 AC062037.2-201ENST00000610137 73 ntBASIC0.45□□□□□ -2.34
ZNF558Q96NG5 AL109933.3-201ENST00000619095 188 ntBASIC0.45□□□□□ -2.34
ZNF558Q96NG5 SNORA22.1-201ENST00000362701 134 ntBASIC0.44□□□□□ -2.34
ZNF558Q96NG5 RNU6-275P-201ENST00000364910 107 ntBASIC0.44□□□□□ -2.34
ZNF558Q96NG5 RNU6-597P-201ENST00000365620 102 ntBASIC0.44□□□□□ -2.34
ZNF558Q96NG5 SNORA50A-201ENST00000384225 134 ntBASIC0.44□□□□□ -2.34
ZNF558Q96NG5 RNU6-448P-201ENST00000517052 107 ntBASIC0.44□□□□□ -2.34
ZNF558Q96NG5 MIR8066-201ENST00000617280 78 ntBASIC0.44□□□□□ -2.34
ZNF558Q96NG5 Y_RNA.42-201ENST00000362660 108 ntBASIC0.43□□□□□ -2.34
ZNF558Q96NG5 Y_RNA.162-201ENST00000363683 102 ntBASIC0.43□□□□□ -2.34
ZNF558Q96NG5 Y_RNA.182-201ENST00000363880 111 ntBASIC0.43□□□□□ -2.34
ZNF558Q96NG5 RNU6-923P-201ENST00000364753 107 ntBASIC0.43□□□□□ -2.34
ZNF558Q96NG5 Y_RNA.477-201ENST00000384352 108 ntBASIC0.43□□□□□ -2.34
ZNF558Q96NG5 RNU4-70P-201ENST00000384579 139 ntBASIC0.43□□□□□ -2.34
ZNF558Q96NG5 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.43□□□□□ -2.34
ZNF558Q96NG5 SNORD93-201ENST00000408813 74 ntBASIC0.43□□□□□ -2.34
ZNF558Q96NG5 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.43□□□□□ -2.34
ZNF558Q96NG5 RNU6-893P-201ENST00000458841 100 ntBASIC0.43□□□□□ -2.34
ZNF558Q96NG5 RNU6-1149P-201ENST00000516810 97 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 369.1 ms