Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 MIR216A-201ENST00000385063 110 ntBASIC1.06□□□□□ -2.24
CCDC138Q96M89 snoU13.2-201ENST00000459201 104 ntBASIC1.06□□□□□ -2.24
CCDC138Q96M89 MIR4295-201ENST00000585286 85 ntBASIC1.06□□□□□ -2.24
CCDC138Q96M89 Y_RNA.441-201ENST00000384123 112 ntBASIC1.05□□□□□ -2.24
CCDC138Q96M89 MIR1827-201ENST00000408549 66 ntBASIC1.05□□□□□ -2.24
CCDC138Q96M89 RNU6-182P-201ENST00000516970 105 ntBASIC1.05□□□□□ -2.24
CCDC138Q96M89 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.05□□□□□ -2.24
CCDC138Q96M89 AC103810.9-201ENST00000606688 112 ntBASIC1.05□□□□□ -2.24
CCDC138Q96M89 MIR6740-201ENST00000618268 113 ntBASIC1.05□□□□□ -2.24
CCDC138Q96M89 AC021613.1-201ENST00000623880 111 ntBASIC1.05□□□□□ -2.24
CCDC138Q96M89 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.04□□□□□ -2.24
CCDC138Q96M89 Y_RNA.52-201ENST00000362760 96 ntBASIC1.04□□□□□ -2.24
CCDC138Q96M89 SNORD114-27-201ENST00000363766 70 ntBASIC1.04□□□□□ -2.24
CCDC138Q96M89 MIR100-201ENST00000385259 80 ntBASIC1.04□□□□□ -2.24
CCDC138Q96M89 SNORD12C-201ENST00000386307 89 ntBASIC1.04□□□□□ -2.24
CCDC138Q96M89 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.04□□□□□ -2.24
CCDC138Q96M89 RNU5E-9P-201ENST00000411164 104 ntBASIC1.04□□□□□ -2.24
CCDC138Q96M89 RPS26P5-201ENST00000418544 335 ntBASIC1.04□□□□□ -2.24
CCDC138Q96M89 MIR18B-201ENST00000454574 71 ntBASIC1.04□□□□□ -2.24
CCDC138Q96M89 snoU13.21-201ENST00000459368 105 ntBASIC1.04□□□□□ -2.24
CCDC138Q96M89 AC087343.1-201ENST00000477341 475 ntBASIC1.04□□□□□ -2.24
CCDC138Q96M89 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.04□□□□□ -2.24
CCDC138Q96M89 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.04□□□□□ -2.24
CCDC138Q96M89 MIR96-201ENST00000362288 78 ntBASIC1.03□□□□□ -2.24
CCDC138Q96M89 Y_RNA.68-201ENST00000362881 102 ntBASIC1.03□□□□□ -2.24
CCDC138Q96M89 MIR520E-201ENST00000384867 87 ntBASIC1.03□□□□□ -2.24
CCDC138Q96M89 RNU6-1165P-201ENST00000410119 107 ntBASIC1.03□□□□□ -2.24
CCDC138Q96M89 RNU6-1135P-201ENST00000411083 103 ntBASIC1.03□□□□□ -2.24
CCDC138Q96M89 SNORD83.1-201ENST00000411362 77 ntBASIC1.03□□□□□ -2.24
CCDC138Q96M89 RNU6-893P-201ENST00000458841 100 ntBASIC1.03□□□□□ -2.24
CCDC138Q96M89 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.03□□□□□ -2.24
CCDC138Q96M89 DNAJC19P2-201ENST00000593340 302 ntBASIC1.03□□□□□ -2.24
CCDC138Q96M89 SNORD114-21-201ENST00000606412 72 ntBASIC1.03□□□□□ -2.24
CCDC138Q96M89 SNORD37.2-201ENST00000391075 66 ntBASIC1.02□□□□□ -2.25
CCDC138Q96M89 MIR548J-201ENST00000408833 112 ntBASIC1.02□□□□□ -2.25
CCDC138Q96M89 ACA64.5-201ENST00000516207 127 ntBASIC1.02□□□□□ -2.25
CCDC138Q96M89 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.02□□□□□ -2.25
CCDC138Q96M89 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
CCDC138Q96M89 RNY1P6-201ENST00000384193 109 ntBASIC1.01□□□□□ -2.25
CCDC138Q96M89 MIR608-201ENST00000384820 100 ntBASIC1.01□□□□□ -2.25
CCDC138Q96M89 RNU6-588P-201ENST00000410281 105 ntBASIC1.01□□□□□ -2.25
CCDC138Q96M89 AC113410.1-201ENST00000505029 247 ntBASIC1.01□□□□□ -2.25
CCDC138Q96M89 MIR4771-2-201ENST00000577758 74 ntBASIC1.01□□□□□ -2.25
CCDC138Q96M89 MIR4771-1-201ENST00000582617 74 ntBASIC1.01□□□□□ -2.25
CCDC138Q96M89 AC211469.2-201ENST00000605461 205 ntBASIC1.01□□□□□ -2.25
CCDC138Q96M89 AC010332.2-201ENST00000613083 1904 ntBASIC1.01□□□□□ -2.25
CCDC138Q96M89 SNORA22.1-201ENST00000362701 134 ntBASIC1□□□□□ -2.25
CCDC138Q96M89 RNU1-93P-201ENST00000364704 169 ntBASIC1□□□□□ -2.25
CCDC138Q96M89 RNU6-1335P-201ENST00000365426 107 ntBASIC1□□□□□ -2.25
CCDC138Q96M89 MIR563-201ENST00000385080 79 ntBASIC1□□□□□ -2.25
CCDC138Q96M89 MTATP6P21-201ENST00000440681 189 ntBASIC1□□□□□ -2.25
CCDC138Q96M89 AC090425.1-201ENST00000610007 140 ntBASIC1□□□□□ -2.25
CCDC138Q96M89 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC1□□□□□ -2.25
CCDC138Q96M89 MIR6841-201ENST00000637129 72 ntBASIC1□□□□□ -2.25
CCDC138Q96M89 Y_RNA.272-201ENST00000364696 102 ntBASIC0.99□□□□□ -2.25
CCDC138Q96M89 RNU6-1187P-201ENST00000364771 110 ntBASIC0.99□□□□□ -2.25
CCDC138Q96M89 Y_RNA.497-201ENST00000384447 98 ntBASIC0.99□□□□□ -2.25
CCDC138Q96M89 MIR193B-201ENST00000384907 83 ntBASIC0.99□□□□□ -2.25
CCDC138Q96M89 SNORD105-201ENST00000386910 85 ntBASIC0.99□□□□□ -2.25
CCDC138Q96M89 RNU2-64P-201ENST00000411315 191 ntBASIC0.99□□□□□ -2.25
CCDC138Q96M89 RNU6-977P-201ENST00000516411 103 ntBASIC0.99□□□□□ -2.25
CCDC138Q96M89 RNU6-794P-201ENST00000517261 64 ntBASIC0.99□□□□□ -2.25
CCDC138Q96M89 AL353765.1-201ENST00000605514 183 ntBASIC0.99□□□□□ -2.25
CCDC138Q96M89 RNU6-369P-201ENST00000362515 102 ntBASIC0.98□□□□□ -2.25
CCDC138Q96M89 MT-TF-201ENST00000387314 71 ntBASIC0.98□□□□□ -2.25
CCDC138Q96M89 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.98□□□□□ -2.25
CCDC138Q96M89 RNA5SP237-201ENST00000410414 113 ntBASIC0.98□□□□□ -2.25
CCDC138Q96M89 RNA5SP236-201ENST00000516169 116 ntBASIC0.98□□□□□ -2.25
CCDC138Q96M89 uc_338.6-201ENST00000613544 171 ntBASIC0.98□□□□□ -2.25
CCDC138Q96M89 MIR3658-201ENST00000636291 56 ntBASIC0.98□□□□□ -2.25
CCDC138Q96M89 MIR6767-201ENST00000637302 66 ntBASIC0.98□□□□□ -2.25
CCDC138Q96M89 RNU4-38P-201ENST00000364472 129 ntBASIC0.97□□□□□ -2.25
CCDC138Q96M89 RNU4-16P-201ENST00000364737 141 ntBASIC0.97□□□□□ -2.25
CCDC138Q96M89 SNORD99-201ENST00000408612 74 ntBASIC0.97□□□□□ -2.25
CCDC138Q96M89 AC074198.2-201ENST00000508153 258 ntBASIC0.97□□□□□ -2.25
CCDC138Q96M89 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.97□□□□□ -2.25
CCDC138Q96M89 MIR30D-201ENST00000362283 70 ntBASIC0.96□□□□□ -2.26
CCDC138Q96M89 RNA5SP457-201ENST00000363657 124 ntBASIC0.96□□□□□ -2.26
CCDC138Q96M89 SNORD18B-201ENST00000365659 72 ntBASIC0.96□□□□□ -2.26
CCDC138Q96M89 Y_RNA.433-201ENST00000384089 102 ntBASIC0.96□□□□□ -2.26
CCDC138Q96M89 Y_RNA.584-201ENST00000391090 114 ntBASIC0.96□□□□□ -2.26
CCDC138Q96M89 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.96□□□□□ -2.26
CCDC138Q96M89 RPL39P28-201ENST00000465655 155 ntBASIC0.96□□□□□ -2.26
CCDC138Q96M89 MIR4676-201ENST00000583078 72 ntBASIC0.96□□□□□ -2.26
CCDC138Q96M89 AC011603.4-201ENST00000611325 277 ntBASIC0.96□□□□□ -2.26
CCDC138Q96M89 RNU6-349P-201ENST00000362402 107 ntBASIC0.95□□□□□ -2.26
CCDC138Q96M89 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CCDC138Q96M89 RNU6-1237P-201ENST00000384777 107 ntBASIC0.95□□□□□ -2.26
CCDC138Q96M89 AC015818.7-201ENST00000428754 109 ntBASIC0.95□□□□□ -2.26
CCDC138Q96M89 AC087499.7-201ENST00000441958 109 ntBASIC0.95□□□□□ -2.26
CCDC138Q96M89 MIR1273G-201ENST00000577677 100 ntBASIC0.95□□□□□ -2.26
CCDC138Q96M89 MIR5000-201ENST00000577717 103 ntBASIC0.95□□□□□ -2.26
CCDC138Q96M89 MIR4804-201ENST00000581683 73 ntBASIC0.95□□□□□ -2.26
CCDC138Q96M89 AC020891.4-201ENST00000605745 93 ntBASIC0.95□□□□□ -2.26
CCDC138Q96M89 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CCDC138Q96M89 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CCDC138Q96M89 AC023934.1-201ENST00000574529 2389 ntBASIC0.94□□□□□ -2.26
CCDC138Q96M89 Y_RNA.85-201ENST00000363014 111 ntBASIC0.94□□□□□ -2.26
CCDC138Q96M89 MIR520F-201ENST00000384824 87 ntBASIC0.94□□□□□ -2.26
CCDC138Q96M89 MIR1257-201ENST00000408490 117 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 235.3 ms