Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 SNRPGP8-201ENST00000454064 226 ntBASIC-0.26□□□□□ -2.45
ECHDC3Q96DC8 RNU7-80P-201ENST00000459562 61 ntBASIC-0.26□□□□□ -2.45
ECHDC3Q96DC8 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.26□□□□□ -2.45
ECHDC3Q96DC8 AC006006.1-201ENST00000603082 144 ntBASIC-0.26□□□□□ -2.45
ECHDC3Q96DC8 AC091932.4-201ENST00000623386 200 ntBASIC-0.26□□□□□ -2.45
ECHDC3Q96DC8 AL596211.1-201ENST00000569873 2277 ntBASIC-0.26□□□□□ -2.45
ECHDC3Q96DC8 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.27□□□□□ -2.45
ECHDC3Q96DC8 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.27□□□□□ -2.45
ECHDC3Q96DC8 RNU6-1283P-201ENST00000365314 105 ntBASIC-0.27□□□□□ -2.45
ECHDC3Q96DC8 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.27□□□□□ -2.45
ECHDC3Q96DC8 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.27□□□□□ -2.45
ECHDC3Q96DC8 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-0.27□□□□□ -2.45
ECHDC3Q96DC8 MTND4P19-201ENST00000446659 478 ntBASIC-0.27□□□□□ -2.45
ECHDC3Q96DC8 MIR5197-201ENST00000583721 112 ntBASIC-0.27□□□□□ -2.45
ECHDC3Q96DC8 MIR1295B-201ENST00000636144 60 ntBASIC-0.27□□□□□ -2.45
ECHDC3Q96DC8 MIR499B-201ENST00000636498 73 ntBASIC-0.27□□□□□ -2.45
ECHDC3Q96DC8 MIR6086-201ENST00000638065 55 ntBASIC-0.27□□□□□ -2.45
ECHDC3Q96DC8 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.28□□□□□ -2.45
ECHDC3Q96DC8 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.28□□□□□ -2.45
ECHDC3Q96DC8 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.28□□□□□ -2.45
ECHDC3Q96DC8 MIR215-201ENST00000384858 110 ntBASIC-0.28□□□□□ -2.45
ECHDC3Q96DC8 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.28□□□□□ -2.45
ECHDC3Q96DC8 RNU6-758P-201ENST00000516292 89 ntBASIC-0.28□□□□□ -2.45
ECHDC3Q96DC8 Y_RNA.697-201ENST00000516776 113 ntBASIC-0.28□□□□□ -2.45
ECHDC3Q96DC8 MIR4752-201ENST00000579672 72 ntBASIC-0.28□□□□□ -2.45
ECHDC3Q96DC8 SNORA25.1-201ENST00000362326 128 ntBASIC-0.29□□□□□ -2.46
ECHDC3Q96DC8 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.29□□□□□ -2.46
ECHDC3Q96DC8 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.29□□□□□ -2.46
ECHDC3Q96DC8 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.29□□□□□ -2.46
ECHDC3Q96DC8 Y_RNA.579-201ENST00000390939 94 ntBASIC-0.29□□□□□ -2.46
ECHDC3Q96DC8 RNU6-823P-201ENST00000391042 103 ntBASIC-0.29□□□□□ -2.46
ECHDC3Q96DC8 RNU6-269P-201ENST00000391077 97 ntBASIC-0.29□□□□□ -2.46
ECHDC3Q96DC8 SNORA53-201ENST00000391141 249 ntBASIC-0.29□□□□□ -2.46
ECHDC3Q96DC8 MIR1252-201ENST00000408861 65 ntBASIC-0.29□□□□□ -2.46
ECHDC3Q96DC8 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.29□□□□□ -2.46
ECHDC3Q96DC8 RNU6-875P-201ENST00000516488 106 ntBASIC-0.29□□□□□ -2.46
ECHDC3Q96DC8 SNORA25.16-201ENST00000516741 121 ntBASIC-0.29□□□□□ -2.46
ECHDC3Q96DC8 AP003072.1-201ENST00000531740 145 ntBASIC-0.29□□□□□ -2.46
ECHDC3Q96DC8 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.3□□□□□ -2.46
ECHDC3Q96DC8 RNY1P13-201ENST00000365030 105 ntBASIC-0.3□□□□□ -2.46
ECHDC3Q96DC8 RNU6-929P-201ENST00000384429 107 ntBASIC-0.3□□□□□ -2.46
ECHDC3Q96DC8 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.3□□□□□ -2.46
ECHDC3Q96DC8 MIR604-201ENST00000384880 94 ntBASIC-0.3□□□□□ -2.46
ECHDC3Q96DC8 Z95118.1-201ENST00000421372 247 ntBASIC-0.3□□□□□ -2.46
ECHDC3Q96DC8 MTND4LP11-201ENST00000422184 280 ntBASIC-0.3□□□□□ -2.46
ECHDC3Q96DC8 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.3□□□□□ -2.46
ECHDC3Q96DC8 MIR4493-201ENST00000584016 73 ntBASIC-0.3□□□□□ -2.46
ECHDC3Q96DC8 AL133255.1-201ENST00000606374 441 ntBASIC-0.3□□□□□ -2.46
ECHDC3Q96DC8 RNA5SP245-201ENST00000364239 121 ntBASIC-0.31□□□□□ -2.46
ECHDC3Q96DC8 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.31□□□□□ -2.46
ECHDC3Q96DC8 RNU6-211P-201ENST00000384047 107 ntBASIC-0.31□□□□□ -2.46
ECHDC3Q96DC8 SNORA72.6-201ENST00000384520 129 ntBASIC-0.31□□□□□ -2.46
ECHDC3Q96DC8 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.31□□□□□ -2.46
ECHDC3Q96DC8 RNU7-165P-201ENST00000458864 60 ntBASIC-0.31□□□□□ -2.46
ECHDC3Q96DC8 RNU6-320P-201ENST00000516511 106 ntBASIC-0.31□□□□□ -2.46
ECHDC3Q96DC8 AC138869.1-201ENST00000568623 124 ntBASIC-0.31□□□□□ -2.46
ECHDC3Q96DC8 MIR101-1-201ENST00000362265 75 ntBASIC-0.32□□□□□ -2.46
ECHDC3Q96DC8 SNORA22.1-201ENST00000362701 134 ntBASIC-0.32□□□□□ -2.46
ECHDC3Q96DC8 Y_RNA.58-201ENST00000362807 102 ntBASIC-0.32□□□□□ -2.46
ECHDC3Q96DC8 RNA5SP275-201ENST00000363936 118 ntBASIC-0.32□□□□□ -2.46
ECHDC3Q96DC8 RNY3P1-201ENST00000365085 102 ntBASIC-0.32□□□□□ -2.46
ECHDC3Q96DC8 RNU6-30P-201ENST00000384561 107 ntBASIC-0.32□□□□□ -2.46
ECHDC3Q96DC8 MT-TT-201ENST00000387460 66 ntBASIC-0.32□□□□□ -2.46
ECHDC3Q96DC8 MIR501-201ENST00000390204 84 ntBASIC-0.32□□□□□ -2.46
ECHDC3Q96DC8 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.32□□□□□ -2.46
ECHDC3Q96DC8 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.32□□□□□ -2.46
ECHDC3Q96DC8 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.32□□□□□ -2.46
ECHDC3Q96DC8 AC104692.1-201ENST00000472406 90 ntBASIC-0.32□□□□□ -2.46
ECHDC3Q96DC8 AC037487.3-201ENST00000606668 112 ntBASIC-0.32□□□□□ -2.46
ECHDC3Q96DC8 AC021613.1-201ENST00000623880 111 ntBASIC-0.32□□□□□ -2.46
ECHDC3Q96DC8 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.33□□□□□ -2.46
ECHDC3Q96DC8 RNU6-726P-201ENST00000364680 107 ntBASIC-0.33□□□□□ -2.46
ECHDC3Q96DC8 AC096531.1-201ENST00000419107 107 ntBASIC-0.33□□□□□ -2.46
ECHDC3Q96DC8 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.33□□□□□ -2.46
ECHDC3Q96DC8 AC090971.5-201ENST00000621102 293 ntBASIC-0.33□□□□□ -2.46
ECHDC3Q96DC8 AL162376.1-201ENST00000624117 175 ntBASIC-0.33□□□□□ -2.46
ECHDC3Q96DC8 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.33□□□□□ -2.46
ECHDC3Q96DC8 SNORA18-201ENST00000384416 132 ntBASIC-0.34□□□□□ -2.46
ECHDC3Q96DC8 SNORA20-201ENST00000384662 132 ntBASIC-0.34□□□□□ -2.46
ECHDC3Q96DC8 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.34□□□□□ -2.46
ECHDC3Q96DC8 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.34□□□□□ -2.46
ECHDC3Q96DC8 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-0.34□□□□□ -2.46
ECHDC3Q96DC8 RNU7-159P-201ENST00000459284 62 ntBASIC-0.34□□□□□ -2.46
ECHDC3Q96DC8 MIR5706-201ENST00000579841 80 ntBASIC-0.34□□□□□ -2.46
ECHDC3Q96DC8 MIR3129-201ENST00000581095 76 ntBASIC-0.34□□□□□ -2.46
ECHDC3Q96DC8 MIR548AD-201ENST00000584780 82 ntBASIC-0.34□□□□□ -2.46
ECHDC3Q96DC8 AL365205.2-201ENST00000594586 68 ntBASIC-0.34□□□□□ -2.46
ECHDC3Q96DC8 AC108676.2-201ENST00000605225 163 ntBASIC-0.34□□□□□ -2.46
ECHDC3Q96DC8 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.35□□□□□ -2.47
ECHDC3Q96DC8 RNU6-450P-201ENST00000364654 107 ntBASIC-0.35□□□□□ -2.47
ECHDC3Q96DC8 Y_RNA.276-201ENST00000364732 109 ntBASIC-0.35□□□□□ -2.47
ECHDC3Q96DC8 RNY4P3-201ENST00000365254 95 ntBASIC-0.35□□□□□ -2.47
ECHDC3Q96DC8 RNU6-652P-201ENST00000365488 107 ntBASIC-0.35□□□□□ -2.47
ECHDC3Q96DC8 SNORD42.2-201ENST00000365570 69 ntBASIC-0.35□□□□□ -2.47
ECHDC3Q96DC8 MIR616-201ENST00000385293 97 ntBASIC-0.35□□□□□ -2.47
ECHDC3Q96DC8 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.35□□□□□ -2.47
ECHDC3Q96DC8 RNA5SP451-201ENST00000410588 110 ntBASIC-0.35□□□□□ -2.47
ECHDC3Q96DC8 ELOCP20-201ENST00000422460 345 ntBASIC-0.35□□□□□ -2.47
ECHDC3Q96DC8 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.35□□□□□ -2.47
ECHDC3Q96DC8 AL360085.1-201ENST00000604713 532 ntBASIC-0.35□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 174.6 ms