Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC141846.1-201ENST00000568348 142 ntBASIC0.31□□□□□ -2.36
VPS33AQ96AX1 AC008737.2-201ENST00000599446 118 ntBASIC0.31□□□□□ -2.36
VPS33AQ96AX1 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.3□□□□□ -2.36
VPS33AQ96AX1 SNORD118-201ENST00000363593 134 ntBASIC0.3□□□□□ -2.36
VPS33AQ96AX1 Y_RNA.288-201ENST00000364854 92 ntBASIC0.3□□□□□ -2.36
VPS33AQ96AX1 SNORA8.2-201ENST00000384372 139 ntBASIC0.3□□□□□ -2.36
VPS33AQ96AX1 MIR499A-201ENST00000384903 122 ntBASIC0.3□□□□□ -2.36
VPS33AQ96AX1 SNORD127-201ENST00000458892 86 ntBASIC0.3□□□□□ -2.36
VPS33AQ96AX1 AC108740.1-201ENST00000498629 225 ntBASIC0.3□□□□□ -2.36
VPS33AQ96AX1 RNU6-863P-201ENST00000515989 104 ntBASIC0.3□□□□□ -2.36
VPS33AQ96AX1 RNU6-469P-201ENST00000516253 101 ntBASIC0.3□□□□□ -2.36
VPS33AQ96AX1 RNU6-1223P-201ENST00000517124 104 ntBASIC0.3□□□□□ -2.36
VPS33AQ96AX1 Y_RNA.47-201ENST00000362697 108 ntBASIC0.29□□□□□ -2.36
VPS33AQ96AX1 SNORD44.1-201ENST00000363202 61 ntBASIC0.29□□□□□ -2.36
VPS33AQ96AX1 RNY4P28-201ENST00000365281 93 ntBASIC0.29□□□□□ -2.36
VPS33AQ96AX1 RNU6-597P-201ENST00000365620 102 ntBASIC0.29□□□□□ -2.36
VPS33AQ96AX1 Y_RNA.562-201ENST00000384695 113 ntBASIC0.29□□□□□ -2.36
VPS33AQ96AX1 Y_RNA.567-201ENST00000384736 106 ntBASIC0.29□□□□□ -2.36
VPS33AQ96AX1 U8.15-201ENST00000390947 134 ntBASIC0.29□□□□□ -2.36
VPS33AQ96AX1 RNU2-38P-201ENST00000410856 79 ntBASIC0.29□□□□□ -2.36
VPS33AQ96AX1 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.29□□□□□ -2.36
VPS33AQ96AX1 MTND1P19-201ENST00000511780 315 ntBASIC0.29□□□□□ -2.36
VPS33AQ96AX1 SCARNA15-202ENST00000516881 127 ntBASIC0.29□□□□□ -2.36
VPS33AQ96AX1 AC243829.6-201ENST00000612652 106 ntBASIC0.29□□□□□ -2.36
VPS33AQ96AX1 MIR6082-201ENST00000613604 109 ntBASIC0.29□□□□□ -2.36
VPS33AQ96AX1 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.29□□□□□ -2.36
VPS33AQ96AX1 MIR6513-201ENST00000621188 64 ntBASIC0.29□□□□□ -2.36
VPS33AQ96AX1 AC243829.3-201ENST00000622177 108 ntBASIC0.29□□□□□ -2.36
VPS33AQ96AX1 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.29□□□□□ -2.36
VPS33AQ96AX1 RNU6-949P-201ENST00000384040 107 ntBASIC0.28□□□□□ -2.36
VPS33AQ96AX1 RNU6-738P-201ENST00000384531 106 ntBASIC0.28□□□□□ -2.36
VPS33AQ96AX1 Y_RNA.556-201ENST00000384677 113 ntBASIC0.28□□□□□ -2.36
VPS33AQ96AX1 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.28□□□□□ -2.36
VPS33AQ96AX1 Y_RNA.797-201ENST00000515977 94 ntBASIC0.28□□□□□ -2.36
VPS33AQ96AX1 AC133485.4-201ENST00000561835 220 ntBASIC0.28□□□□□ -2.36
VPS33AQ96AX1 AL078603.1-201ENST00000603824 313 ntBASIC0.28□□□□□ -2.36
VPS33AQ96AX1 Y_RNA.13-201ENST00000362403 112 ntBASIC0.27□□□□□ -2.37
VPS33AQ96AX1 Y_RNA.238-201ENST00000364441 102 ntBASIC0.27□□□□□ -2.37
VPS33AQ96AX1 Y_RNA.308-201ENST00000365043 101 ntBASIC0.27□□□□□ -2.37
VPS33AQ96AX1 RNU6-643P-201ENST00000384018 107 ntBASIC0.27□□□□□ -2.37
VPS33AQ96AX1 Y_RNA.588-201ENST00000391254 102 ntBASIC0.27□□□□□ -2.37
VPS33AQ96AX1 RNU5E-9P-201ENST00000411164 104 ntBASIC0.27□□□□□ -2.37
VPS33AQ96AX1 SNRPGP12-201ENST00000449481 213 ntBASIC0.27□□□□□ -2.37
VPS33AQ96AX1 RNU6-135P-201ENST00000516769 101 ntBASIC0.27□□□□□ -2.37
VPS33AQ96AX1 MIR103A1-201ENST00000362165 78 ntBASIC0.26□□□□□ -2.37
VPS33AQ96AX1 RNU6-403P-201ENST00000363163 104 ntBASIC0.26□□□□□ -2.37
VPS33AQ96AX1 RNU6-1099P-201ENST00000363533 107 ntBASIC0.26□□□□□ -2.37
VPS33AQ96AX1 Y_RNA.174-201ENST00000363781 105 ntBASIC0.26□□□□□ -2.37
VPS33AQ96AX1 Y_RNA.224-201ENST00000364308 111 ntBASIC0.26□□□□□ -2.37
VPS33AQ96AX1 SNORD58.1-201ENST00000391313 66 ntBASIC0.26□□□□□ -2.37
VPS33AQ96AX1 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.26□□□□□ -2.37
VPS33AQ96AX1 RNA5SP247-201ENST00000411181 105 ntBASIC0.26□□□□□ -2.37
VPS33AQ96AX1 AL512326.2-201ENST00000426359 151 ntBASIC0.26□□□□□ -2.37
VPS33AQ96AX1 RNU6-1149P-201ENST00000516810 97 ntBASIC0.26□□□□□ -2.37
VPS33AQ96AX1 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
VPS33AQ96AX1 RNU2-4P-201ENST00000606190 192 ntBASIC0.26□□□□□ -2.37
VPS33AQ96AX1 SNORA25.18-201ENST00000607153 114 ntBASIC0.26□□□□□ -2.37
VPS33AQ96AX1 RNU6-493P-201ENST00000391321 108 ntBASIC0.25□□□□□ -2.37
VPS33AQ96AX1 Y_RNA.617-201ENST00000410920 90 ntBASIC0.25□□□□□ -2.37
VPS33AQ96AX1 RNU6-1086P-201ENST00000410930 100 ntBASIC0.25□□□□□ -2.37
VPS33AQ96AX1 AL358176.2-201ENST00000425769 204 ntBASIC0.25□□□□□ -2.37
VPS33AQ96AX1 MIR4491-201ENST00000581087 68 ntBASIC0.25□□□□□ -2.37
VPS33AQ96AX1 SNORA25.7-201ENST00000364375 127 ntBASIC0.24□□□□□ -2.37
VPS33AQ96AX1 VTRNA1-3-201ENST00000365645 89 ntBASIC0.24□□□□□ -2.37
VPS33AQ96AX1 Y_RNA.459-201ENST00000384251 102 ntBASIC0.24□□□□□ -2.37
VPS33AQ96AX1 SNORA18-201ENST00000384416 132 ntBASIC0.24□□□□□ -2.37
VPS33AQ96AX1 AC096949.1-201ENST00000412047 152 ntBASIC0.24□□□□□ -2.37
VPS33AQ96AX1 RNU6-1132P-201ENST00000459214 107 ntBASIC0.24□□□□□ -2.37
VPS33AQ96AX1 RNA5SP220-201ENST00000516298 104 ntBASIC0.24□□□□□ -2.37
VPS33AQ96AX1 RNY3P16-201ENST00000516338 101 ntBASIC0.24□□□□□ -2.37
VPS33AQ96AX1 MIR4711-201ENST00000578274 70 ntBASIC0.24□□□□□ -2.37
VPS33AQ96AX1 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
VPS33AQ96AX1 AC078938.1-201ENST00000620993 318 ntBASIC0.24□□□□□ -2.37
VPS33AQ96AX1 RNA5SP62-201ENST00000363457 110 ntBASIC0.23□□□□□ -2.37
VPS33AQ96AX1 Y_RNA.571-201ENST00000384753 98 ntBASIC0.23□□□□□ -2.37
VPS33AQ96AX1 RNA5SP193-201ENST00000410353 107 ntBASIC0.23□□□□□ -2.37
VPS33AQ96AX1 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.23□□□□□ -2.37
VPS33AQ96AX1 Y_RNA.20-201ENST00000362479 113 ntBASIC0.22□□□□□ -2.37
VPS33AQ96AX1 SNORA36.1-201ENST00000363424 132 ntBASIC0.22□□□□□ -2.37
VPS33AQ96AX1 RNU6-275P-201ENST00000364910 107 ntBASIC0.22□□□□□ -2.37
VPS33AQ96AX1 RNY1P6-201ENST00000384193 109 ntBASIC0.22□□□□□ -2.37
VPS33AQ96AX1 Y_RNA.478-201ENST00000384358 107 ntBASIC0.22□□□□□ -2.37
VPS33AQ96AX1 RNU4-70P-201ENST00000384579 139 ntBASIC0.22□□□□□ -2.37
VPS33AQ96AX1 RNU6-1011P-201ENST00000384668 107 ntBASIC0.22□□□□□ -2.37
VPS33AQ96AX1 MIR4431-201ENST00000579990 94 ntBASIC0.22□□□□□ -2.37
VPS33AQ96AX1 Y_RNA.182-201ENST00000363880 111 ntBASIC0.21□□□□□ -2.38
VPS33AQ96AX1 RNU4-16P-201ENST00000364737 141 ntBASIC0.21□□□□□ -2.38
VPS33AQ96AX1 RNY1P13-201ENST00000365030 105 ntBASIC0.21□□□□□ -2.38
VPS33AQ96AX1 MIR644A-201ENST00000385262 94 ntBASIC0.21□□□□□ -2.38
VPS33AQ96AX1 MIR1302-3-201ENST00000408128 138 ntBASIC0.21□□□□□ -2.38
VPS33AQ96AX1 Y_RNA.626-201ENST00000411288 95 ntBASIC0.21□□□□□ -2.38
VPS33AQ96AX1 MTCYBP9-201ENST00000431021 303 ntBASIC0.21□□□□□ -2.38
VPS33AQ96AX1 Y_RNA.757-201ENST00000578934 114 ntBASIC0.21□□□□□ -2.38
VPS33AQ96AX1 RNU6-349P-201ENST00000362402 107 ntBASIC0.2□□□□□ -2.38
VPS33AQ96AX1 Y_RNA.32-201ENST00000362589 110 ntBASIC0.2□□□□□ -2.38
VPS33AQ96AX1 SNORD27-201ENST00000363981 72 ntBASIC0.2□□□□□ -2.38
VPS33AQ96AX1 SNORA72.6-201ENST00000384520 129 ntBASIC0.2□□□□□ -2.38
VPS33AQ96AX1 MIR936-201ENST00000401264 98 ntBASIC0.2□□□□□ -2.38
VPS33AQ96AX1 RNU2-59P-201ENST00000410482 191 ntBASIC0.2□□□□□ -2.38
VPS33AQ96AX1 MTND2P23-201ENST00000422990 651 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 250.8 ms