Protein–RNA interactions for Protein: Q969G2

LHX4, LIM/homeobox protein Lhx4, humanhuman

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX4Q969G2 Y_RNA.288-201ENST00000364854 92 ntBASIC0.38□□□□□ -2.35
LHX4Q969G2 Y_RNA.459-201ENST00000384251 102 ntBASIC0.38□□□□□ -2.35
LHX4Q969G2 Y_RNA.562-201ENST00000384695 113 ntBASIC0.38□□□□□ -2.35
LHX4Q969G2 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.38□□□□□ -2.35
LHX4Q969G2 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.38□□□□□ -2.35
LHX4Q969G2 AL121914.1-201ENST00000450188 156 ntBASIC0.38□□□□□ -2.35
LHX4Q969G2 AC002350.1-201ENST00000490759 375 ntBASIC0.38□□□□□ -2.35
LHX4Q969G2 SNORA68.3-201ENST00000515906 83 ntBASIC0.38□□□□□ -2.35
LHX4Q969G2 AL662814.1-201ENST00000617364 121 ntBASIC0.38□□□□□ -2.35
LHX4Q969G2 AL589743.1-201ENST00000551932 2712 ntBASIC0.38□□□□□ -2.35
LHX4Q969G2 RNU6-597P-201ENST00000365620 102 ntBASIC0.37□□□□□ -2.35
LHX4Q969G2 RNU6-578P-201ENST00000390980 103 ntBASIC0.37□□□□□ -2.35
LHX4Q969G2 RNA5SP193-201ENST00000410353 107 ntBASIC0.37□□□□□ -2.35
LHX4Q969G2 SEPT7P4-201ENST00000437076 306 ntBASIC0.37□□□□□ -2.35
LHX4Q969G2 RNY3P16-201ENST00000516338 101 ntBASIC0.37□□□□□ -2.35
LHX4Q969G2 SNORD116-25-201ENST00000516517 92 ntBASIC0.37□□□□□ -2.35
LHX4Q969G2 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.37□□□□□ -2.35
LHX4Q969G2 MIR6841-201ENST00000637129 72 ntBASIC0.37□□□□□ -2.35
LHX4Q969G2 SNORD114-23-201ENST00000363536 72 ntBASIC0.36□□□□□ -2.35
LHX4Q969G2 Y_RNA.308-201ENST00000365043 101 ntBASIC0.36□□□□□ -2.35
LHX4Q969G2 RNY4P28-201ENST00000365281 93 ntBASIC0.36□□□□□ -2.35
LHX4Q969G2 RNU6-1011P-201ENST00000384668 107 ntBASIC0.36□□□□□ -2.35
LHX4Q969G2 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.36□□□□□ -2.35
LHX4Q969G2 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.36□□□□□ -2.35
LHX4Q969G2 MIR3152-201ENST00000579801 74 ntBASIC0.36□□□□□ -2.35
LHX4Q969G2 MIR378D2-201ENST00000580636 98 ntBASIC0.36□□□□□ -2.35
LHX4Q969G2 AC243829.6-201ENST00000612652 106 ntBASIC0.36□□□□□ -2.35
LHX4Q969G2 AC092634.7-201ENST00000621022 103 ntBASIC0.36□□□□□ -2.35
LHX4Q969G2 SNORA20-201ENST00000384662 132 ntBASIC0.35□□□□□ -2.35
LHX4Q969G2 RNU6-493P-201ENST00000391321 108 ntBASIC0.35□□□□□ -2.35
LHX4Q969G2 RNA5SP237-201ENST00000410414 113 ntBASIC0.35□□□□□ -2.35
LHX4Q969G2 RNU6-448P-201ENST00000517052 107 ntBASIC0.35□□□□□ -2.35
LHX4Q969G2 AC021613.1-201ENST00000623880 111 ntBASIC0.35□□□□□ -2.35
LHX4Q969G2 MIRLET7D-201ENST00000362263 87 ntBASIC0.34□□□□□ -2.36
LHX4Q969G2 Y_RNA.42-201ENST00000362660 108 ntBASIC0.34□□□□□ -2.36
LHX4Q969G2 Y_RNA.121-201ENST00000363309 113 ntBASIC0.34□□□□□ -2.36
LHX4Q969G2 SNORD93-201ENST00000408813 74 ntBASIC0.34□□□□□ -2.36
LHX4Q969G2 RNA5SP127-201ENST00000411051 133 ntBASIC0.34□□□□□ -2.36
LHX4Q969G2 MTND1P19-201ENST00000511780 315 ntBASIC0.34□□□□□ -2.36
LHX4Q969G2 SCARNA15-202ENST00000516881 127 ntBASIC0.34□□□□□ -2.36
LHX4Q969G2 AL360085.1-201ENST00000604713 532 ntBASIC0.34□□□□□ -2.36
LHX4Q969G2 RNU2-4P-201ENST00000606190 192 ntBASIC0.34□□□□□ -2.36
LHX4Q969G2 MIR8066-201ENST00000617280 78 ntBASIC0.34□□□□□ -2.36
LHX4Q969G2 AC010487.4-201ENST00000637027 61 ntBASIC0.34□□□□□ -2.36
LHX4Q969G2 SNORA22.1-201ENST00000362701 134 ntBASIC0.33□□□□□ -2.36
LHX4Q969G2 RNA5SP517-201ENST00000364724 117 ntBASIC0.33□□□□□ -2.36
LHX4Q969G2 SNORA50A-201ENST00000384225 134 ntBASIC0.33□□□□□ -2.36
LHX4Q969G2 Y_RNA.556-201ENST00000384677 113 ntBASIC0.33□□□□□ -2.36
LHX4Q969G2 MIR624-201ENST00000385217 97 ntBASIC0.33□□□□□ -2.36
LHX4Q969G2 RNU6-679P-201ENST00000391003 106 ntBASIC0.33□□□□□ -2.36
LHX4Q969G2 SNORD58.1-201ENST00000391313 66 ntBASIC0.33□□□□□ -2.36
LHX4Q969G2 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.33□□□□□ -2.36
LHX4Q969G2 RNU4-83P-201ENST00000410863 133 ntBASIC0.33□□□□□ -2.36
LHX4Q969G2 MTND2P23-201ENST00000422990 651 ntBASIC0.33□□□□□ -2.36
LHX4Q969G2 MTCYBP9-201ENST00000431021 303 ntBASIC0.33□□□□□ -2.36
LHX4Q969G2 RPL39P25-201ENST00000449384 154 ntBASIC0.33□□□□□ -2.36
LHX4Q969G2 Y_RNA.797-201ENST00000515977 94 ntBASIC0.33□□□□□ -2.36
LHX4Q969G2 Y_RNA.668-201ENST00000516233 93 ntBASIC0.33□□□□□ -2.36
LHX4Q969G2 RNA5SP94-201ENST00000516917 108 ntBASIC0.33□□□□□ -2.36
LHX4Q969G2 RNU7-70P-201ENST00000516941 66 ntBASIC0.33□□□□□ -2.36
LHX4Q969G2 AC141846.1-201ENST00000568348 142 ntBASIC0.33□□□□□ -2.36
LHX4Q969G2 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.33□□□□□ -2.36
LHX4Q969G2 SNORD27-201ENST00000363981 72 ntBASIC0.32□□□□□ -2.36
LHX4Q969G2 RNU6-643P-201ENST00000384018 107 ntBASIC0.32□□□□□ -2.36
LHX4Q969G2 Y_RNA.539-201ENST00000384635 107 ntBASIC0.32□□□□□ -2.36
LHX4Q969G2 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.32□□□□□ -2.36
LHX4Q969G2 RNU6-1149P-201ENST00000516810 97 ntBASIC0.32□□□□□ -2.36
LHX4Q969G2 MIR4308-201ENST00000580634 81 ntBASIC0.32□□□□□ -2.36
LHX4Q969G2 Y_RNA.20-201ENST00000362479 113 ntBASIC0.31□□□□□ -2.36
LHX4Q969G2 Y_RNA.133-201ENST00000363428 110 ntBASIC0.31□□□□□ -2.36
LHX4Q969G2 RNU6-694P-201ENST00000364071 147 ntBASIC0.31□□□□□ -2.36
LHX4Q969G2 RNU6-923P-201ENST00000364753 107 ntBASIC0.31□□□□□ -2.36
LHX4Q969G2 RNA5SP117-201ENST00000365294 118 ntBASIC0.31□□□□□ -2.36
LHX4Q969G2 VTRNA1-3-201ENST00000365645 89 ntBASIC0.31□□□□□ -2.36
LHX4Q969G2 Y_RNA.571-201ENST00000384753 98 ntBASIC0.31□□□□□ -2.36
LHX4Q969G2 MIR193B-201ENST00000384907 83 ntBASIC0.31□□□□□ -2.36
LHX4Q969G2 MIR7-2-201ENST00000384970 110 ntBASIC0.31□□□□□ -2.36
LHX4Q969G2 U8.15-201ENST00000390947 134 ntBASIC0.31□□□□□ -2.36
LHX4Q969G2 AP003327.1-201ENST00000529684 127 ntBASIC0.31□□□□□ -2.36
LHX4Q969G2 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
LHX4Q969G2 MIR3678-201ENST00000578455 94 ntBASIC0.31□□□□□ -2.36
LHX4Q969G2 AC090625.1-201ENST00000357130 210 ntBASIC0.3□□□□□ -2.36
LHX4Q969G2 Y_RNA.182-201ENST00000363880 111 ntBASIC0.3□□□□□ -2.36
LHX4Q969G2 MIR568-201ENST00000385036 95 ntBASIC0.3□□□□□ -2.36
LHX4Q969G2 MIR518A1-201ENST00000385068 85 ntBASIC0.3□□□□□ -2.36
LHX4Q969G2 SNORA40.8-201ENST00000411034 126 ntBASIC0.3□□□□□ -2.36
LHX4Q969G2 Y_RNA.626-201ENST00000411288 95 ntBASIC0.3□□□□□ -2.36
LHX4Q969G2 uc_338.16-201ENST00000621804 95 ntBASIC0.3□□□□□ -2.36
LHX4Q969G2 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
LHX4Q969G2 Y_RNA.65-201ENST00000362846 100 ntBASIC0.29□□□□□ -2.36
LHX4Q969G2 RNU6-275P-201ENST00000364910 107 ntBASIC0.29□□□□□ -2.36
LHX4Q969G2 Y_RNA.477-201ENST00000384352 108 ntBASIC0.29□□□□□ -2.36
LHX4Q969G2 Y_RNA.588-201ENST00000391254 102 ntBASIC0.29□□□□□ -2.36
LHX4Q969G2 Y_RNA.617-201ENST00000410920 90 ntBASIC0.29□□□□□ -2.36
LHX4Q969G2 SNORD71-201ENST00000411292 86 ntBASIC0.29□□□□□ -2.36
LHX4Q969G2 AC096949.1-201ENST00000412047 152 ntBASIC0.29□□□□□ -2.36
LHX4Q969G2 SNORA25.12-201ENST00000516202 82 ntBASIC0.29□□□□□ -2.36
LHX4Q969G2 RNA5SP134-201ENST00000516492 96 ntBASIC0.29□□□□□ -2.36
LHX4Q969G2 Y_RNA.13-201ENST00000362403 112 ntBASIC0.28□□□□□ -2.36
LHX4Q969G2 RNU4-16P-201ENST00000364737 141 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 182.1 ms