Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 MIR563-201ENST00000385080 79 ntBASIC2.76□□□□□ -1.97
HPS1Q92902 RNU11-3P-201ENST00000391111 133 ntBASIC2.76□□□□□ -1.97
HPS1Q92902 AC244023.1-201ENST00000426884 112 ntBASIC2.76□□□□□ -1.97
HPS1Q92902 Z96811.1-201ENST00000445880 108 ntBASIC2.76□□□□□ -1.97
HPS1Q92902 SNORA59A-201ENST00000459326 152 ntBASIC2.76□□□□□ -1.97
HPS1Q92902 SUB1P4-201ENST00000566062 339 ntBASIC2.76□□□□□ -1.97
HPS1Q92902 UBL5P2-201ENST00000583788 219 ntBASIC2.76□□□□□ -1.97
HPS1Q92902 AC242498.1-201ENST00000604134 111 ntBASIC2.76□□□□□ -1.97
HPS1Q92902 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
HPS1Q92902 RNA5SP374-201ENST00000362939 125 ntBASIC2.75□□□□□ -1.97
HPS1Q92902 RNU6-895P-201ENST00000384125 103 ntBASIC2.75□□□□□ -1.97
HPS1Q92902 S100A11P2-201ENST00000467589 312 ntBASIC2.75□□□□□ -1.97
HPS1Q92902 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.75□□□□□ -1.97
HPS1Q92902 RNA5SP445-201ENST00000515889 115 ntBASIC2.75□□□□□ -1.97
HPS1Q92902 RNVU1-2-201ENST00000516326 135 ntBASIC2.75□□□□□ -1.97
HPS1Q92902 SNORA4-201ENST00000584302 138 ntBASIC2.75□□□□□ -1.97
HPS1Q92902 AL162274.2-201ENST00000614406 332 ntBASIC2.75□□□□□ -1.97
HPS1Q92902 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
HPS1Q92902 RNU6-957P-201ENST00000363652 99 ntBASIC2.74□□□□□ -1.97
HPS1Q92902 RNU6-1051P-201ENST00000365471 102 ntBASIC2.74□□□□□ -1.97
HPS1Q92902 RNU7-106P-201ENST00000459514 67 ntBASIC2.74□□□□□ -1.97
HPS1Q92902 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.74□□□□□ -1.97
HPS1Q92902 AC103706.3-201ENST00000636297 85 ntBASIC2.74□□□□□ -1.97
HPS1Q92902 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.74□□□□□ -1.97
HPS1Q92902 RNU6-112P-201ENST00000363599 104 ntBASIC2.73□□□□□ -1.97
HPS1Q92902 RNU6-669P-201ENST00000365575 107 ntBASIC2.73□□□□□ -1.97
HPS1Q92902 RNU6-614P-201ENST00000384369 107 ntBASIC2.73□□□□□ -1.97
HPS1Q92902 MIR588-201ENST00000384900 83 ntBASIC2.73□□□□□ -1.97
HPS1Q92902 SNORA48.1-201ENST00000390879 135 ntBASIC2.73□□□□□ -1.97
HPS1Q92902 MIR1283-2-201ENST00000408621 87 ntBASIC2.73□□□□□ -1.97
HPS1Q92902 MIR1289-1-201ENST00000408836 144 ntBASIC2.73□□□□□ -1.97
HPS1Q92902 AC092628.1-201ENST00000436250 252 ntBASIC2.73□□□□□ -1.97
HPS1Q92902 AC009474.2-201ENST00000451383 136 ntBASIC2.73□□□□□ -1.97
HPS1Q92902 RNU7-26P-201ENST00000458980 63 ntBASIC2.73□□□□□ -1.97
HPS1Q92902 MIR4511-201ENST00000582784 87 ntBASIC2.73□□□□□ -1.97
HPS1Q92902 MIR3675-201ENST00000583661 73 ntBASIC2.73□□□□□ -1.97
HPS1Q92902 U6.59-201ENST00000615686 107 ntBASIC2.73□□□□□ -1.97
HPS1Q92902 MIR422A-201ENST00000362286 90 ntBASIC2.72□□□□□ -1.97
HPS1Q92902 RNU6-681P-201ENST00000364012 104 ntBASIC2.72□□□□□ -1.97
HPS1Q92902 Y_RNA.207-201ENST00000364142 106 ntBASIC2.72□□□□□ -1.97
HPS1Q92902 RN7SKP220-201ENST00000410611 288 ntBASIC2.72□□□□□ -1.97
HPS1Q92902 RNA5SP229-201ENST00000410809 99 ntBASIC2.72□□□□□ -1.97
HPS1Q92902 AC107016.2-201ENST00000547968 190 ntBASIC2.72□□□□□ -1.97
HPS1Q92902 MIR3670-2-201ENST00000582974 65 ntBASIC2.72□□□□□ -1.97
HPS1Q92902 MIR3670-1-201ENST00000584160 65 ntBASIC2.72□□□□□ -1.97
HPS1Q92902 MIR3670-3-201ENST00000584855 65 ntBASIC2.72□□□□□ -1.97
HPS1Q92902 MIR3670-4-201ENST00000612260 65 ntBASIC2.72□□□□□ -1.97
HPS1Q92902 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.72□□□□□ -1.97
HPS1Q92902 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HPS1Q92902 RNY4P3-201ENST00000365254 95 ntBASIC2.71□□□□□ -1.98
HPS1Q92902 Y_RNA.371-201ENST00000365591 113 ntBASIC2.71□□□□□ -1.98
HPS1Q92902 Y_RNA.606-201ENST00000410579 103 ntBASIC2.71□□□□□ -1.98
HPS1Q92902 HMGN2P35-201ENST00000412164 270 ntBASIC2.71□□□□□ -1.98
HPS1Q92902 RPS29P6-201ENST00000438196 145 ntBASIC2.71□□□□□ -1.98
HPS1Q92902 RN7SL863P-201ENST00000462370 296 ntBASIC2.71□□□□□ -1.98
HPS1Q92902 RN7SL633P-201ENST00000488974 297 ntBASIC2.71□□□□□ -1.98
HPS1Q92902 RNU7-41P-201ENST00000515917 61 ntBASIC2.71□□□□□ -1.98
HPS1Q92902 RNA5SP341-201ENST00000516261 117 ntBASIC2.71□□□□□ -1.98
HPS1Q92902 MIR8053-201ENST00000613344 75 ntBASIC2.71□□□□□ -1.98
HPS1Q92902 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
HPS1Q92902 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
HPS1Q92902 MIR30D-201ENST00000362283 70 ntBASIC2.7□□□□□ -1.98
HPS1Q92902 RNA5SP465-201ENST00000391195 109 ntBASIC2.7□□□□□ -1.98
HPS1Q92902 SNORA11.2-201ENST00000408318 127 ntBASIC2.7□□□□□ -1.98
HPS1Q92902 RNA5SP274-201ENST00000410484 108 ntBASIC2.7□□□□□ -1.98
HPS1Q92902 RNU6-1194P-201ENST00000516208 104 ntBASIC2.7□□□□□ -1.98
HPS1Q92902 RNA5SP137-201ENST00000516833 135 ntBASIC2.7□□□□□ -1.98
HPS1Q92902 MIR3126-201ENST00000577443 74 ntBASIC2.7□□□□□ -1.98
HPS1Q92902 PRELID3BP2-201ENST00000605362 201 ntBASIC2.7□□□□□ -1.98
HPS1Q92902 U4.3-201ENST00000621047 82 ntBASIC2.7□□□□□ -1.98
HPS1Q92902 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
HPS1Q92902 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.7□□□□□ -1.98
HPS1Q92902 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HPS1Q92902 SNORD45A-201ENST00000384512 84 ntBASIC2.69□□□□□ -1.98
HPS1Q92902 SNORD63B-201ENST00000411005 70 ntBASIC2.69□□□□□ -1.98
HPS1Q92902 AC110620.1-201ENST00000416042 228 ntBASIC2.69□□□□□ -1.98
HPS1Q92902 HMGN2P3-201ENST00000433603 273 ntBASIC2.69□□□□□ -1.98
HPS1Q92902 HMGN2P5-201ENST00000436882 273 ntBASIC2.69□□□□□ -1.98
HPS1Q92902 AC079150.2-201ENST00000443733 78 ntBASIC2.69□□□□□ -1.98
HPS1Q92902 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.69□□□□□ -1.98
HPS1Q92902 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.69□□□□□ -1.98
HPS1Q92902 MIR622-201ENST00000638396 96 ntBASIC2.69□□□□□ -1.98
HPS1Q92902 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.69□□□□□ -1.98
HPS1Q92902 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
HPS1Q92902 SNORA7.4-201ENST00000384249 137 ntBASIC2.68□□□□□ -1.98
HPS1Q92902 SNORD15B-201ENST00000384714 146 ntBASIC2.68□□□□□ -1.98
HPS1Q92902 COTL1P1-201ENST00000422309 375 ntBASIC2.68□□□□□ -1.98
HPS1Q92902 SNORA31.15-201ENST00000516771 132 ntBASIC2.68□□□□□ -1.98
HPS1Q92902 RNU6-881P-201ENST00000516813 102 ntBASIC2.68□□□□□ -1.98
HPS1Q92902 MIR2682-201ENST00000580305 110 ntBASIC2.68□□□□□ -1.98
HPS1Q92902 MIR4513-201ENST00000581077 86 ntBASIC2.68□□□□□ -1.98
HPS1Q92902 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
HPS1Q92902 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.67□□□□□ -1.98
HPS1Q92902 RNA5SP48-201ENST00000363969 126 ntBASIC2.67□□□□□ -1.98
HPS1Q92902 SNORA67.4-201ENST00000384688 142 ntBASIC2.67□□□□□ -1.98
HPS1Q92902 MIR653-201ENST00000385279 96 ntBASIC2.67□□□□□ -1.98
HPS1Q92902 AC104389.3-201ENST00000445629 235 ntBASIC2.67□□□□□ -1.98
HPS1Q92902 AL627230.6-201ENST00000611129 280 ntBASIC2.67□□□□□ -1.98
HPS1Q92902 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
HPS1Q92902 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 208.7 ms