Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 MT-TN-201ENST00000387400 73 ntBASIC1.51□□□□□ -2.17
CCHCR1Q8TD31 AC244023.1-201ENST00000426884 112 ntBASIC1.51□□□□□ -2.17
CCHCR1Q8TD31 AC048334.1-201ENST00000477975 159 ntBASIC1.51□□□□□ -2.17
CCHCR1Q8TD31 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.51□□□□□ -2.17
CCHCR1Q8TD31 AC242498.1-201ENST00000604134 111 ntBASIC1.51□□□□□ -2.17
CCHCR1Q8TD31 RNU7-113P-201ENST00000459273 62 ntBASIC1.5□□□□□ -2.17
CCHCR1Q8TD31 RNU6-237P-201ENST00000515985 71 ntBASIC1.5□□□□□ -2.17
CCHCR1Q8TD31 MIR2115-201ENST00000516657 100 ntBASIC1.5□□□□□ -2.17
CCHCR1Q8TD31 MIR6516-201ENST00000630554 81 ntBASIC1.5□□□□□ -2.17
CCHCR1Q8TD31 Y_RNA.273-201ENST00000364703 102 ntBASIC1.49□□□□□ -2.17
CCHCR1Q8TD31 Y_RNA.470-201ENST00000384307 117 ntBASIC1.49□□□□□ -2.17
CCHCR1Q8TD31 MT-TI-201ENST00000387365 69 ntBASIC1.49□□□□□ -2.17
CCHCR1Q8TD31 MIR1323-201ENST00000408090 73 ntBASIC1.49□□□□□ -2.17
CCHCR1Q8TD31 RNU6-613P-201ENST00000410412 108 ntBASIC1.49□□□□□ -2.17
CCHCR1Q8TD31 Y_RNA.629-201ENST00000411368 105 ntBASIC1.49□□□□□ -2.17
CCHCR1Q8TD31 RPS23P4-201ENST00000487908 423 ntBASIC1.49□□□□□ -2.17
CCHCR1Q8TD31 SNORA31.2-201ENST00000516019 134 ntBASIC1.49□□□□□ -2.17
CCHCR1Q8TD31 SNORD33.1-201ENST00000516213 88 ntBASIC1.49□□□□□ -2.17
CCHCR1Q8TD31 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.49□□□□□ -2.17
CCHCR1Q8TD31 AC022523.2-201ENST00000561045 150 ntBASIC1.49□□□□□ -2.17
CCHCR1Q8TD31 Y_RNA.213-201ENST00000364178 111 ntBASIC1.48□□□□□ -2.17
CCHCR1Q8TD31 Y_RNA.363-201ENST00000365529 113 ntBASIC1.48□□□□□ -2.17
CCHCR1Q8TD31 AL354695.1-201ENST00000427935 228 ntBASIC1.48□□□□□ -2.17
CCHCR1Q8TD31 MIR4264-201ENST00000583520 66 ntBASIC1.48□□□□□ -2.17
CCHCR1Q8TD31 MIR4769-201ENST00000584126 77 ntBASIC1.48□□□□□ -2.17
CCHCR1Q8TD31 RNU6-1290P-201ENST00000362957 109 ntBASIC1.47□□□□□ -2.17
CCHCR1Q8TD31 Y_RNA.299-201ENST00000364973 94 ntBASIC1.47□□□□□ -2.17
CCHCR1Q8TD31 SNORD12C-201ENST00000386307 89 ntBASIC1.47□□□□□ -2.17
CCHCR1Q8TD31 RNA5SP33-201ENST00000516687 98 ntBASIC1.47□□□□□ -2.17
CCHCR1Q8TD31 MIR4303-201ENST00000581299 66 ntBASIC1.47□□□□□ -2.17
CCHCR1Q8TD31 AL645939.4-201ENST00000604495 135 ntBASIC1.47□□□□□ -2.17
CCHCR1Q8TD31 AL670379.3-201ENST00000605040 251 ntBASIC1.47□□□□□ -2.17
CCHCR1Q8TD31 SEPT14P17-201ENST00000617978 177 ntBASIC1.47□□□□□ -2.17
CCHCR1Q8TD31 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CCHCR1Q8TD31 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
CCHCR1Q8TD31 MIR377-201ENST00000362145 69 ntBASIC1.46□□□□□ -2.18
CCHCR1Q8TD31 MIR26B-201ENST00000362251 77 ntBASIC1.46□□□□□ -2.18
CCHCR1Q8TD31 MIR150-201ENST00000385048 84 ntBASIC1.46□□□□□ -2.18
CCHCR1Q8TD31 RNU6-735P-201ENST00000410612 107 ntBASIC1.46□□□□□ -2.18
CCHCR1Q8TD31 RNA5SP61-201ENST00000516453 100 ntBASIC1.46□□□□□ -2.18
CCHCR1Q8TD31 AL512598.1-201ENST00000610158 273 ntBASIC1.46□□□□□ -2.18
CCHCR1Q8TD31 Y_RNA.140-201ENST00000363474 103 ntBASIC1.45□□□□□ -2.18
CCHCR1Q8TD31 RNU6-580P-201ENST00000365159 107 ntBASIC1.45□□□□□ -2.18
CCHCR1Q8TD31 RNU6-1144P-201ENST00000384247 104 ntBASIC1.45□□□□□ -2.18
CCHCR1Q8TD31 RNU6-476P-201ENST00000384726 107 ntBASIC1.45□□□□□ -2.18
CCHCR1Q8TD31 MIR548A3-201ENST00000385297 97 ntBASIC1.45□□□□□ -2.18
CCHCR1Q8TD31 MIR759-201ENST00000390224 91 ntBASIC1.45□□□□□ -2.18
CCHCR1Q8TD31 MIR758-201ENST00000390227 88 ntBASIC1.45□□□□□ -2.18
CCHCR1Q8TD31 RNU6-1064P-201ENST00000410626 104 ntBASIC1.45□□□□□ -2.18
CCHCR1Q8TD31 RNU4-69P-201ENST00000410677 143 ntBASIC1.45□□□□□ -2.18
CCHCR1Q8TD31 Y_RNA.649-201ENST00000459077 103 ntBASIC1.45□□□□□ -2.18
CCHCR1Q8TD31 snoU13.2-201ENST00000459201 104 ntBASIC1.45□□□□□ -2.18
CCHCR1Q8TD31 RNU1-92P-201ENST00000517017 135 ntBASIC1.45□□□□□ -2.18
CCHCR1Q8TD31 MIR3163-201ENST00000581592 73 ntBASIC1.45□□□□□ -2.18
CCHCR1Q8TD31 AP000753.3-201ENST00000604083 169 ntBASIC1.45□□□□□ -2.18
CCHCR1Q8TD31 ZNF209P-201ENST00000593450 2304 ntBASIC1.44□□□□□ -2.18
CCHCR1Q8TD31 RNU6-654P-201ENST00000364373 107 ntBASIC1.44□□□□□ -2.18
CCHCR1Q8TD31 SNORD26-201ENST00000384147 75 ntBASIC1.44□□□□□ -2.18
CCHCR1Q8TD31 MIR563-201ENST00000385080 79 ntBASIC1.44□□□□□ -2.18
CCHCR1Q8TD31 SNORA17.3-201ENST00000391159 129 ntBASIC1.44□□□□□ -2.18
CCHCR1Q8TD31 AC108667.1-201ENST00000428618 249 ntBASIC1.44□□□□□ -2.18
CCHCR1Q8TD31 MIR548AE2-201ENST00000583456 67 ntBASIC1.44□□□□□ -2.18
CCHCR1Q8TD31 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.44□□□□□ -2.18
CCHCR1Q8TD31 RNY4P6-201ENST00000363667 96 ntBASIC1.43□□□□□ -2.18
CCHCR1Q8TD31 RNU6-1056P-201ENST00000383996 107 ntBASIC1.43□□□□□ -2.18
CCHCR1Q8TD31 RNU6-342P-201ENST00000384521 104 ntBASIC1.43□□□□□ -2.18
CCHCR1Q8TD31 SNORA75.2-201ENST00000391138 150 ntBASIC1.43□□□□□ -2.18
CCHCR1Q8TD31 SNORA75.3-201ENST00000391231 150 ntBASIC1.43□□□□□ -2.18
CCHCR1Q8TD31 MIR1270-201ENST00000459320 83 ntBASIC1.43□□□□□ -2.18
CCHCR1Q8TD31 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.43□□□□□ -2.18
CCHCR1Q8TD31 SNORD79.1-201ENST00000516069 84 ntBASIC1.43□□□□□ -2.18
CCHCR1Q8TD31 SNORA18-201ENST00000384416 132 ntBASIC1.42□□□□□ -2.18
CCHCR1Q8TD31 SNORA80D-201ENST00000384488 135 ntBASIC1.42□□□□□ -2.18
CCHCR1Q8TD31 RNU6-910P-201ENST00000390844 107 ntBASIC1.42□□□□□ -2.18
CCHCR1Q8TD31 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.42□□□□□ -2.18
CCHCR1Q8TD31 RNU6-1086P-201ENST00000410930 100 ntBASIC1.42□□□□□ -2.18
CCHCR1Q8TD31 RNU7-21P-201ENST00000459430 62 ntBASIC1.42□□□□□ -2.18
CCHCR1Q8TD31 RNA5SP458-201ENST00000516188 119 ntBASIC1.42□□□□□ -2.18
CCHCR1Q8TD31 RNU7-35P-201ENST00000517174 62 ntBASIC1.42□□□□□ -2.18
CCHCR1Q8TD31 MIR4679-2-201ENST00000578358 77 ntBASIC1.42□□□□□ -2.18
CCHCR1Q8TD31 MIR6740-201ENST00000618268 113 ntBASIC1.42□□□□□ -2.18
CCHCR1Q8TD31 AC087741.2-201ENST00000619415 172 ntBASIC1.42□□□□□ -2.18
CCHCR1Q8TD31 SNORD115-19-201ENST00000363098 82 ntBASIC1.41□□□□□ -2.18
CCHCR1Q8TD31 SNORD115-18-201ENST00000363293 82 ntBASIC1.41□□□□□ -2.18
CCHCR1Q8TD31 Y_RNA.168-201ENST00000363740 102 ntBASIC1.41□□□□□ -2.18
CCHCR1Q8TD31 SNORD115-17-201ENST00000364612 82 ntBASIC1.41□□□□□ -2.18
CCHCR1Q8TD31 MIR588-201ENST00000384900 83 ntBASIC1.41□□□□□ -2.18
CCHCR1Q8TD31 MIR548D2-201ENST00000384955 97 ntBASIC1.41□□□□□ -2.18
CCHCR1Q8TD31 MIR548A1-201ENST00000385041 97 ntBASIC1.41□□□□□ -2.18
CCHCR1Q8TD31 RNU4-62P-201ENST00000410125 130 ntBASIC1.41□□□□□ -2.18
CCHCR1Q8TD31 AL591704.2-201ENST00000421658 181 ntBASIC1.41□□□□□ -2.18
CCHCR1Q8TD31 MTND5P34-201ENST00000568888 325 ntBASIC1.41□□□□□ -2.18
CCHCR1Q8TD31 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CCHCR1Q8TD31 RNU6-429P-201ENST00000384582 108 ntBASIC1.4□□□□□ -2.19
CCHCR1Q8TD31 RNU6-205P-201ENST00000390858 107 ntBASIC1.4□□□□□ -2.19
CCHCR1Q8TD31 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.4□□□□□ -2.19
CCHCR1Q8TD31 RNU7-6P-201ENST00000516845 62 ntBASIC1.4□□□□□ -2.19
CCHCR1Q8TD31 AC007012.1-201ENST00000567192 175 ntBASIC1.4□□□□□ -2.19
CCHCR1Q8TD31 MIR3124-201ENST00000582636 67 ntBASIC1.4□□□□□ -2.19
CCHCR1Q8TD31 AL662814.1-201ENST00000617364 121 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 264.4 ms