Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 RNU7-35P-201ENST00000517174 62 ntBASIC1.38□□□□□ -2.19
CLRN3Q8NCR9 RNY4P6-201ENST00000363667 96 ntBASIC1.37□□□□□ -2.19
CLRN3Q8NCR9 RNA5SP205-201ENST00000364653 136 ntBASIC1.37□□□□□ -2.19
CLRN3Q8NCR9 Y_RNA.525-201ENST00000384570 113 ntBASIC1.37□□□□□ -2.19
CLRN3Q8NCR9 RNU6-1104P-201ENST00000384723 104 ntBASIC1.37□□□□□ -2.19
CLRN3Q8NCR9 MIR19B1-201ENST00000384829 87 ntBASIC1.37□□□□□ -2.19
CLRN3Q8NCR9 RNU6-994P-201ENST00000410507 111 ntBASIC1.37□□□□□ -2.19
CLRN3Q8NCR9 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.37□□□□□ -2.19
CLRN3Q8NCR9 AC141846.1-201ENST00000568348 142 ntBASIC1.37□□□□□ -2.19
CLRN3Q8NCR9 SNORA4-201ENST00000584302 138 ntBASIC1.37□□□□□ -2.19
CLRN3Q8NCR9 SNORA32-201ENST00000384072 121 ntBASIC1.36□□□□□ -2.19
CLRN3Q8NCR9 RN7SKP223-201ENST00000410582 62 ntBASIC1.36□□□□□ -2.19
CLRN3Q8NCR9 RNU7-79P-201ENST00000516082 62 ntBASIC1.36□□□□□ -2.19
CLRN3Q8NCR9 RNU7-40P-201ENST00000516397 64 ntBASIC1.36□□□□□ -2.19
CLRN3Q8NCR9 MIR4648-201ENST00000580107 72 ntBASIC1.36□□□□□ -2.19
CLRN3Q8NCR9 AL670379.3-201ENST00000605040 251 ntBASIC1.36□□□□□ -2.19
CLRN3Q8NCR9 MIR7974-201ENST00000615835 79 ntBASIC1.36□□□□□ -2.19
CLRN3Q8NCR9 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CLRN3Q8NCR9 SNORA70B-201ENST00000384210 135 ntBASIC1.35□□□□□ -2.19
CLRN3Q8NCR9 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.35□□□□□ -2.19
CLRN3Q8NCR9 SNORA3.2-201ENST00000408221 125 ntBASIC1.35□□□□□ -2.19
CLRN3Q8NCR9 AC067940.1-201ENST00000458411 300 ntBASIC1.35□□□□□ -2.19
CLRN3Q8NCR9 RNU7-6P-201ENST00000516845 62 ntBASIC1.35□□□□□ -2.19
CLRN3Q8NCR9 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.19
CLRN3Q8NCR9 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
CLRN3Q8NCR9 MIR30D-201ENST00000362283 70 ntBASIC1.34□□□□□ -2.19
CLRN3Q8NCR9 SNORA22C-201ENST00000384614 134 ntBASIC1.34□□□□□ -2.19
CLRN3Q8NCR9 MIR200A-201ENST00000384875 90 ntBASIC1.34□□□□□ -2.19
CLRN3Q8NCR9 MIR548A3-201ENST00000385297 97 ntBASIC1.34□□□□□ -2.19
CLRN3Q8NCR9 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
CLRN3Q8NCR9 Y_RNA.649-201ENST00000459077 103 ntBASIC1.34□□□□□ -2.19
CLRN3Q8NCR9 RPS29P11-201ENST00000496507 171 ntBASIC1.34□□□□□ -2.19
CLRN3Q8NCR9 MIR548AI-201ENST00000579940 88 ntBASIC1.34□□□□□ -2.19
CLRN3Q8NCR9 MIR4781-201ENST00000585250 76 ntBASIC1.34□□□□□ -2.19
CLRN3Q8NCR9 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CLRN3Q8NCR9 RNU6-834P-201ENST00000362367 110 ntBASIC1.33□□□□□ -2.2
CLRN3Q8NCR9 Y_RNA.353-201ENST00000365440 108 ntBASIC1.33□□□□□ -2.2
CLRN3Q8NCR9 RNU6-949P-201ENST00000384040 107 ntBASIC1.33□□□□□ -2.2
CLRN3Q8NCR9 MIR618-201ENST00000385287 98 ntBASIC1.33□□□□□ -2.2
CLRN3Q8NCR9 MIR548I2-201ENST00000408348 149 ntBASIC1.33□□□□□ -2.2
CLRN3Q8NCR9 SNORD33.1-201ENST00000516213 88 ntBASIC1.33□□□□□ -2.2
CLRN3Q8NCR9 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
CLRN3Q8NCR9 RNU1-124P-201ENST00000363861 145 ntBASIC1.32□□□□□ -2.2
CLRN3Q8NCR9 RNU6-934P-201ENST00000365154 107 ntBASIC1.32□□□□□ -2.2
CLRN3Q8NCR9 MIR548D2-201ENST00000384955 97 ntBASIC1.32□□□□□ -2.2
CLRN3Q8NCR9 MIR150-201ENST00000385048 84 ntBASIC1.32□□□□□ -2.2
CLRN3Q8NCR9 MIR320A-201ENST00000385302 82 ntBASIC1.32□□□□□ -2.2
CLRN3Q8NCR9 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.32□□□□□ -2.2
CLRN3Q8NCR9 FABP5P4-201ENST00000437203 171 ntBASIC1.32□□□□□ -2.2
CLRN3Q8NCR9 RNA5SP404-201ENST00000517118 132 ntBASIC1.32□□□□□ -2.2
CLRN3Q8NCR9 FAM71BP1-201ENST00000604431 523 ntBASIC1.32□□□□□ -2.2
CLRN3Q8NCR9 RNU6-94P-201ENST00000607728 107 ntBASIC1.32□□□□□ -2.2
CLRN3Q8NCR9 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.31□□□□□ -2.2
CLRN3Q8NCR9 SNORD115-19-201ENST00000363098 82 ntBASIC1.31□□□□□ -2.2
CLRN3Q8NCR9 SNORD115-18-201ENST00000363293 82 ntBASIC1.31□□□□□ -2.2
CLRN3Q8NCR9 SNORD115-17-201ENST00000364612 82 ntBASIC1.31□□□□□ -2.2
CLRN3Q8NCR9 RNY1P13-201ENST00000365030 105 ntBASIC1.31□□□□□ -2.2
CLRN3Q8NCR9 SNORA64-201ENST00000384674 134 ntBASIC1.31□□□□□ -2.2
CLRN3Q8NCR9 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.31□□□□□ -2.2
CLRN3Q8NCR9 RNA5SP182-201ENST00000516064 82 ntBASIC1.31□□□□□ -2.2
CLRN3Q8NCR9 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
CLRN3Q8NCR9 SNORD114-10-201ENST00000363409 72 ntBASIC1.3□□□□□ -2.2
CLRN3Q8NCR9 MT-TI-201ENST00000387365 69 ntBASIC1.3□□□□□ -2.2
CLRN3Q8NCR9 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.3□□□□□ -2.2
CLRN3Q8NCR9 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.3□□□□□ -2.2
CLRN3Q8NCR9 uc_338.6-201ENST00000613544 171 ntBASIC1.3□□□□□ -2.2
CLRN3Q8NCR9 AC087741.2-201ENST00000619415 172 ntBASIC1.3□□□□□ -2.2
CLRN3Q8NCR9 MIR1257-201ENST00000408490 117 ntBASIC1.29□□□□□ -2.2
CLRN3Q8NCR9 SNORD83.1-201ENST00000411362 77 ntBASIC1.29□□□□□ -2.2
CLRN3Q8NCR9 RPS29P28-201ENST00000446439 141 ntBASIC1.29□□□□□ -2.2
CLRN3Q8NCR9 MIR4771-2-201ENST00000577758 74 ntBASIC1.29□□□□□ -2.2
CLRN3Q8NCR9 MIR4679-2-201ENST00000578358 77 ntBASIC1.29□□□□□ -2.2
CLRN3Q8NCR9 MIR4771-1-201ENST00000582617 74 ntBASIC1.29□□□□□ -2.2
CLRN3Q8NCR9 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.29□□□□□ -2.2
CLRN3Q8NCR9 AL136317.1-201ENST00000612653 226 ntBASIC1.29□□□□□ -2.2
CLRN3Q8NCR9 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.29□□□□□ -2.2
CLRN3Q8NCR9 MIR1-1-201ENST00000362147 71 ntBASIC1.28□□□□□ -2.2
CLRN3Q8NCR9 Y_RNA.273-201ENST00000364703 102 ntBASIC1.28□□□□□ -2.2
CLRN3Q8NCR9 Y_RNA.291-201ENST00000364886 113 ntBASIC1.28□□□□□ -2.2
CLRN3Q8NCR9 SNORD114-24-201ENST00000365029 72 ntBASIC1.28□□□□□ -2.2
CLRN3Q8NCR9 RNU6-1056P-201ENST00000383996 107 ntBASIC1.28□□□□□ -2.2
CLRN3Q8NCR9 RNU6-447P-201ENST00000410293 104 ntBASIC1.28□□□□□ -2.2
CLRN3Q8NCR9 RNU6-1118P-201ENST00000410382 104 ntBASIC1.28□□□□□ -2.2
CLRN3Q8NCR9 RNU6-1076P-201ENST00000410397 104 ntBASIC1.28□□□□□ -2.2
CLRN3Q8NCR9 RNU6-355P-201ENST00000410427 104 ntBASIC1.28□□□□□ -2.2
CLRN3Q8NCR9 RNU6-791P-201ENST00000410467 104 ntBASIC1.28□□□□□ -2.2
CLRN3Q8NCR9 RNU6-705P-201ENST00000410601 104 ntBASIC1.28□□□□□ -2.2
CLRN3Q8NCR9 RNU6-735P-201ENST00000410612 107 ntBASIC1.28□□□□□ -2.2
CLRN3Q8NCR9 RNU6-1064P-201ENST00000410626 104 ntBASIC1.28□□□□□ -2.2
CLRN3Q8NCR9 RNU6-1100P-201ENST00000410691 104 ntBASIC1.28□□□□□ -2.2
CLRN3Q8NCR9 RNU6-860P-201ENST00000410860 104 ntBASIC1.28□□□□□ -2.2
CLRN3Q8NCR9 RNU6-1217P-201ENST00000411276 104 ntBASIC1.28□□□□□ -2.2
CLRN3Q8NCR9 RNU6-785P-201ENST00000411324 104 ntBASIC1.28□□□□□ -2.2
CLRN3Q8NCR9 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.28□□□□□ -2.2
CLRN3Q8NCR9 RPS26P5-201ENST00000418544 335 ntBASIC1.28□□□□□ -2.2
CLRN3Q8NCR9 MIR1270-201ENST00000459320 83 ntBASIC1.28□□□□□ -2.2
CLRN3Q8NCR9 snoU13.21-201ENST00000459368 105 ntBASIC1.28□□□□□ -2.2
CLRN3Q8NCR9 RPL23AP94-201ENST00000512518 302 ntBASIC1.28□□□□□ -2.2
CLRN3Q8NCR9 AC007012.1-201ENST00000567192 175 ntBASIC1.28□□□□□ -2.2
CLRN3Q8NCR9 MTND5P34-201ENST00000568888 325 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 166.8 ms