Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 AC091932.4-201ENST00000623386 200 ntBASIC1.03□□□□□ -2.24
USP38Q8NB14 MIR330-201ENST00000362196 94 ntBASIC1.02□□□□□ -2.25
USP38Q8NB14 Y_RNA.168-201ENST00000363740 102 ntBASIC1.02□□□□□ -2.25
USP38Q8NB14 RNU6-200P-201ENST00000364743 107 ntBASIC1.02□□□□□ -2.25
USP38Q8NB14 Y_RNA.357-201ENST00000365487 109 ntBASIC1.02□□□□□ -2.25
USP38Q8NB14 RPS3AP1-201ENST00000413190 320 ntBASIC1.02□□□□□ -2.25
USP38Q8NB14 AC244023.1-201ENST00000426884 112 ntBASIC1.02□□□□□ -2.25
USP38Q8NB14 RNU7-62P-201ENST00000458856 62 ntBASIC1.02□□□□□ -2.25
USP38Q8NB14 AC242498.1-201ENST00000604134 111 ntBASIC1.02□□□□□ -2.25
USP38Q8NB14 Y_RNA.257-201ENST00000364596 102 ntBASIC1.01□□□□□ -2.25
USP38Q8NB14 RNU6-312P-201ENST00000364629 107 ntBASIC1.01□□□□□ -2.25
USP38Q8NB14 MT-TN-201ENST00000387400 73 ntBASIC1.01□□□□□ -2.25
USP38Q8NB14 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.01□□□□□ -2.25
USP38Q8NB14 RNA5SP193-201ENST00000410353 107 ntBASIC1.01□□□□□ -2.25
USP38Q8NB14 RNU6-602P-201ENST00000411155 105 ntBASIC1.01□□□□□ -2.25
USP38Q8NB14 snoU13.21-201ENST00000459368 105 ntBASIC1.01□□□□□ -2.25
USP38Q8NB14 RNU6-1149P-201ENST00000516810 97 ntBASIC1.01□□□□□ -2.25
USP38Q8NB14 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.01□□□□□ -2.25
USP38Q8NB14 AC072026.1-201ENST00000605023 201 ntBASIC1.01□□□□□ -2.25
USP38Q8NB14 MIR2909-201ENST00000617113 69 ntBASIC1.01□□□□□ -2.25
USP38Q8NB14 Z97988.1-201ENST00000637697 135 ntBASIC1.01□□□□□ -2.25
USP38Q8NB14 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1□□□□□ -2.25
USP38Q8NB14 MIR1-1-201ENST00000362147 71 ntBASIC1□□□□□ -2.25
USP38Q8NB14 MIR624-201ENST00000385217 97 ntBASIC1□□□□□ -2.25
USP38Q8NB14 MIR100-201ENST00000385259 80 ntBASIC1□□□□□ -2.25
USP38Q8NB14 SNORD83.1-201ENST00000411362 77 ntBASIC1□□□□□ -2.25
USP38Q8NB14 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1□□□□□ -2.25
USP38Q8NB14 ACA64.5-201ENST00000516207 127 ntBASIC1□□□□□ -2.25
USP38Q8NB14 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1□□□□□ -2.25
USP38Q8NB14 Y_RNA.337-201ENST00000365312 102 ntBASIC0.99□□□□□ -2.25
USP38Q8NB14 SNORA20-201ENST00000384662 132 ntBASIC0.99□□□□□ -2.25
USP38Q8NB14 RNU6-768P-201ENST00000384683 107 ntBASIC0.99□□□□□ -2.25
USP38Q8NB14 RNU6-861P-201ENST00000516745 106 ntBASIC0.99□□□□□ -2.25
USP38Q8NB14 MIR6717-201ENST00000622747 73 ntBASIC0.99□□□□□ -2.25
USP38Q8NB14 MIR377-201ENST00000362145 69 ntBASIC0.98□□□□□ -2.25
USP38Q8NB14 RNU6-934P-201ENST00000365154 107 ntBASIC0.98□□□□□ -2.25
USP38Q8NB14 MIR588-201ENST00000384900 83 ntBASIC0.98□□□□□ -2.25
USP38Q8NB14 SNORD12C-201ENST00000386307 89 ntBASIC0.98□□□□□ -2.25
USP38Q8NB14 RNA5SP261-201ENST00000410536 106 ntBASIC0.98□□□□□ -2.25
USP38Q8NB14 AC015818.7-201ENST00000428754 109 ntBASIC0.98□□□□□ -2.25
USP38Q8NB14 AC098934.3-201ENST00000430450 190 ntBASIC0.98□□□□□ -2.25
USP38Q8NB14 AC087499.7-201ENST00000441958 109 ntBASIC0.98□□□□□ -2.25
USP38Q8NB14 RPL39P28-201ENST00000465655 155 ntBASIC0.98□□□□□ -2.25
USP38Q8NB14 RNA5SP255-201ENST00000516370 107 ntBASIC0.98□□□□□ -2.25
USP38Q8NB14 MIR3152-201ENST00000579801 74 ntBASIC0.98□□□□□ -2.25
USP38Q8NB14 MTND5P32-201ENST00000560711 1802 ntBASIC0.97□□□□□ -2.25
USP38Q8NB14 Y_RNA.29-201ENST00000362570 113 ntBASIC0.97□□□□□ -2.25
USP38Q8NB14 RNU4-16P-201ENST00000364737 141 ntBASIC0.97□□□□□ -2.25
USP38Q8NB14 RNU6-1335P-201ENST00000365426 107 ntBASIC0.97□□□□□ -2.25
USP38Q8NB14 U7.7-201ENST00000459276 60 ntBASIC0.97□□□□□ -2.25
USP38Q8NB14 MIR4771-2-201ENST00000577758 74 ntBASIC0.97□□□□□ -2.25
USP38Q8NB14 MIR4771-1-201ENST00000582617 74 ntBASIC0.97□□□□□ -2.25
USP38Q8NB14 AC090425.1-201ENST00000610007 140 ntBASIC0.97□□□□□ -2.25
USP38Q8NB14 AL136317.1-201ENST00000612653 226 ntBASIC0.97□□□□□ -2.25
USP38Q8NB14 MIR6844-201ENST00000637122 62 ntBASIC0.97□□□□□ -2.25
USP38Q8NB14 AC010332.2-201ENST00000613083 1904 ntBASIC0.97□□□□□ -2.25
USP38Q8NB14 RNU6-682P-201ENST00000363843 106 ntBASIC0.96□□□□□ -2.26
USP38Q8NB14 RNU6-1082P-201ENST00000364574 107 ntBASIC0.96□□□□□ -2.26
USP38Q8NB14 RNU6-597P-201ENST00000365620 102 ntBASIC0.96□□□□□ -2.26
USP38Q8NB14 RNU6-1237P-201ENST00000384777 107 ntBASIC0.96□□□□□ -2.26
USP38Q8NB14 SNORD37.2-201ENST00000391075 66 ntBASIC0.96□□□□□ -2.26
USP38Q8NB14 RNU5E-9P-201ENST00000411164 104 ntBASIC0.96□□□□□ -2.26
USP38Q8NB14 Y_RNA.662-201ENST00000516028 97 ntBASIC0.96□□□□□ -2.26
USP38Q8NB14 SNORA81.3-201ENST00000517283 198 ntBASIC0.96□□□□□ -2.26
USP38Q8NB14 AC004792.1-201ENST00000614523 137 ntBASIC0.96□□□□□ -2.26
USP38Q8NB14 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.96□□□□□ -2.26
USP38Q8NB14 MIR6740-201ENST00000618268 113 ntBASIC0.96□□□□□ -2.26
USP38Q8NB14 AC023934.1-201ENST00000574529 2389 ntBASIC0.95□□□□□ -2.26
USP38Q8NB14 RNU6-818P-201ENST00000364837 108 ntBASIC0.95□□□□□ -2.26
USP38Q8NB14 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.95□□□□□ -2.26
USP38Q8NB14 AC004941.2-201ENST00000427009 228 ntBASIC0.95□□□□□ -2.26
USP38Q8NB14 AC074198.2-201ENST00000508153 258 ntBASIC0.95□□□□□ -2.26
USP38Q8NB14 RNU6-977P-201ENST00000516411 103 ntBASIC0.95□□□□□ -2.26
USP38Q8NB14 SCARNA15-202ENST00000516881 127 ntBASIC0.95□□□□□ -2.26
USP38Q8NB14 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.95□□□□□ -2.26
USP38Q8NB14 MIR4711-201ENST00000578274 70 ntBASIC0.95□□□□□ -2.26
USP38Q8NB14 RNU6-580P-201ENST00000365159 107 ntBASIC0.94□□□□□ -2.26
USP38Q8NB14 SNORA26.6-201ENST00000391256 115 ntBASIC0.94□□□□□ -2.26
USP38Q8NB14 RNU7-120P-201ENST00000459334 63 ntBASIC0.94□□□□□ -2.26
USP38Q8NB14 RNU6-1110P-201ENST00000516462 101 ntBASIC0.94□□□□□ -2.26
USP38Q8NB14 AC133485.1-201ENST00000567176 124 ntBASIC0.94□□□□□ -2.26
USP38Q8NB14 AC138907.6-201ENST00000568401 126 ntBASIC0.94□□□□□ -2.26
USP38Q8NB14 uc_338.6-201ENST00000613544 171 ntBASIC0.94□□□□□ -2.26
USP38Q8NB14 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
USP38Q8NB14 Y_RNA.52-201ENST00000362760 96 ntBASIC0.93□□□□□ -2.26
USP38Q8NB14 RNY1P11-201ENST00000363759 113 ntBASIC0.93□□□□□ -2.26
USP38Q8NB14 Y_RNA.240-201ENST00000364469 95 ntBASIC0.93□□□□□ -2.26
USP38Q8NB14 RNU1-36P-201ENST00000365130 165 ntBASIC0.93□□□□□ -2.26
USP38Q8NB14 RNU6-1318P-201ENST00000365389 103 ntBASIC0.93□□□□□ -2.26
USP38Q8NB14 RNU6-1319P-201ENST00000390855 104 ntBASIC0.93□□□□□ -2.26
USP38Q8NB14 RNU6-747P-201ENST00000390928 104 ntBASIC0.93□□□□□ -2.26
USP38Q8NB14 RNU6-239P-201ENST00000390990 99 ntBASIC0.93□□□□□ -2.26
USP38Q8NB14 RNU6-241P-201ENST00000391148 104 ntBASIC0.93□□□□□ -2.26
USP38Q8NB14 MIR1827-201ENST00000408549 66 ntBASIC0.93□□□□□ -2.26
USP38Q8NB14 RNU6-1165P-201ENST00000410119 107 ntBASIC0.93□□□□□ -2.26
USP38Q8NB14 RNU6-588P-201ENST00000410281 105 ntBASIC0.93□□□□□ -2.26
USP38Q8NB14 RNA5SP237-201ENST00000410414 113 ntBASIC0.93□□□□□ -2.26
USP38Q8NB14 RNU6-177P-201ENST00000411257 104 ntBASIC0.93□□□□□ -2.26
USP38Q8NB14 RNU2-64P-201ENST00000411315 191 ntBASIC0.93□□□□□ -2.26
USP38Q8NB14 RPS26P5-201ENST00000418544 335 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms