Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.43□□□□□ -2.02
DEPDC4Q8N2C3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.43□□□□□ -2.02
DEPDC4Q8N2C3 AC103810.8-201ENST00000607347 118 ntBASIC2.43□□□□□ -2.02
DEPDC4Q8N2C3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
DEPDC4Q8N2C3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
DEPDC4Q8N2C3 SNORD33-201ENST00000362761 85 ntBASIC2.42□□□□□ -2.02
DEPDC4Q8N2C3 RNU6-949P-201ENST00000384040 107 ntBASIC2.42□□□□□ -2.02
DEPDC4Q8N2C3 MIR17-201ENST00000385012 84 ntBASIC2.42□□□□□ -2.02
DEPDC4Q8N2C3 BTF3P4-201ENST00000418852 495 ntBASIC2.42□□□□□ -2.02
DEPDC4Q8N2C3 AL133373.1-201ENST00000497098 94 ntBASIC2.42□□□□□ -2.02
DEPDC4Q8N2C3 MIR4264-201ENST00000583520 66 ntBASIC2.42□□□□□ -2.02
DEPDC4Q8N2C3 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.42□□□□□ -2.02
DEPDC4Q8N2C3 MIR302D-201ENST00000362275 68 ntBASIC2.41□□□□□ -2.02
DEPDC4Q8N2C3 RNU6-1163P-201ENST00000364516 107 ntBASIC2.41□□□□□ -2.02
DEPDC4Q8N2C3 RNU6-1237P-201ENST00000384777 107 ntBASIC2.41□□□□□ -2.02
DEPDC4Q8N2C3 MIR563-201ENST00000385080 79 ntBASIC2.41□□□□□ -2.02
DEPDC4Q8N2C3 MIR9-1-201ENST00000385198 89 ntBASIC2.41□□□□□ -2.02
DEPDC4Q8N2C3 MIR2115-201ENST00000516657 100 ntBASIC2.41□□□□□ -2.02
DEPDC4Q8N2C3 AP001362.1-201ENST00000625165 124 ntBASIC2.41□□□□□ -2.02
DEPDC4Q8N2C3 Y_RNA.17-201ENST00000362433 111 ntBASIC2.4□□□□□ -2.03
DEPDC4Q8N2C3 RNU6-859P-201ENST00000362728 107 ntBASIC2.4□□□□□ -2.03
DEPDC4Q8N2C3 RNU6-1152P-201ENST00000384576 107 ntBASIC2.4□□□□□ -2.03
DEPDC4Q8N2C3 MIR30A-201ENST00000385092 71 ntBASIC2.4□□□□□ -2.03
DEPDC4Q8N2C3 AL138827.1-201ENST00000402666 306 ntBASIC2.4□□□□□ -2.03
DEPDC4Q8N2C3 MIR548G-201ENST00000408442 89 ntBASIC2.4□□□□□ -2.03
DEPDC4Q8N2C3 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.4□□□□□ -2.03
DEPDC4Q8N2C3 snoU13.9-201ENST00000458927 103 ntBASIC2.4□□□□□ -2.03
DEPDC4Q8N2C3 RNU6-162P-201ENST00000516228 103 ntBASIC2.4□□□□□ -2.03
DEPDC4Q8N2C3 AP003716.2-201ENST00000528260 108 ntBASIC2.4□□□□□ -2.03
DEPDC4Q8N2C3 AC079600.2-201ENST00000550076 130 ntBASIC2.4□□□□□ -2.03
DEPDC4Q8N2C3 AP000753.3-201ENST00000604083 169 ntBASIC2.4□□□□□ -2.03
DEPDC4Q8N2C3 RNU6-90P-201ENST00000606352 106 ntBASIC2.4□□□□□ -2.03
DEPDC4Q8N2C3 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.4□□□□□ -2.03
DEPDC4Q8N2C3 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.4□□□□□ -2.03
DEPDC4Q8N2C3 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
DEPDC4Q8N2C3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.03
DEPDC4Q8N2C3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
DEPDC4Q8N2C3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.4□□□□□ -2.03
DEPDC4Q8N2C3 SNORD58A-201ENST00000383875 65 ntBASIC2.39□□□□□ -2.03
DEPDC4Q8N2C3 U8.15-201ENST00000390947 134 ntBASIC2.39□□□□□ -2.03
DEPDC4Q8N2C3 Y_RNA.593-201ENST00000410292 98 ntBASIC2.39□□□□□ -2.03
DEPDC4Q8N2C3 RNA5SP21-201ENST00000410917 96 ntBASIC2.39□□□□□ -2.03
DEPDC4Q8N2C3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.39□□□□□ -2.03
DEPDC4Q8N2C3 SNORD109B-201ENST00000458961 67 ntBASIC2.39□□□□□ -2.03
DEPDC4Q8N2C3 SNORD109A-201ENST00000459128 67 ntBASIC2.39□□□□□ -2.03
DEPDC4Q8N2C3 RN7SL274P-201ENST00000492268 272 ntBASIC2.39□□□□□ -2.03
DEPDC4Q8N2C3 RNA5SP445-201ENST00000515889 115 ntBASIC2.39□□□□□ -2.03
DEPDC4Q8N2C3 AC133485.1-201ENST00000567176 124 ntBASIC2.39□□□□□ -2.03
DEPDC4Q8N2C3 AC105081.1-201ENST00000617727 106 ntBASIC2.39□□□□□ -2.03
DEPDC4Q8N2C3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
DEPDC4Q8N2C3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.38□□□□□ -2.03
DEPDC4Q8N2C3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.38□□□□□ -2.03
DEPDC4Q8N2C3 RNY1P2-201ENST00000364820 117 ntBASIC2.38□□□□□ -2.03
DEPDC4Q8N2C3 SNORA70B-201ENST00000384210 135 ntBASIC2.38□□□□□ -2.03
DEPDC4Q8N2C3 MIR588-201ENST00000384900 83 ntBASIC2.38□□□□□ -2.03
DEPDC4Q8N2C3 RNA5SP233-201ENST00000459153 113 ntBASIC2.38□□□□□ -2.03
DEPDC4Q8N2C3 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.38□□□□□ -2.03
DEPDC4Q8N2C3 AL359851.1-201ENST00000569460 4997 ntBASIC2.38□□□□□ -2.03
DEPDC4Q8N2C3 AC131280.1-202ENST00000624067 4211 ntBASIC2.38□□□□□ -2.03
DEPDC4Q8N2C3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
DEPDC4Q8N2C3 MIR377-201ENST00000362145 69 ntBASIC2.37□□□□□ -2.03
DEPDC4Q8N2C3 SNORD116-22-201ENST00000384430 92 ntBASIC2.37□□□□□ -2.03
DEPDC4Q8N2C3 RPL30P7-201ENST00000479312 323 ntBASIC2.37□□□□□ -2.03
DEPDC4Q8N2C3 RPS27P21-201ENST00000486977 252 ntBASIC2.37□□□□□ -2.03
DEPDC4Q8N2C3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
DEPDC4Q8N2C3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.36□□□□□ -2.03
DEPDC4Q8N2C3 HSBP1P2-201ENST00000299671 229 ntBASIC2.36□□□□□ -2.03
DEPDC4Q8N2C3 RNU6-1244P-201ENST00000363614 108 ntBASIC2.36□□□□□ -2.03
DEPDC4Q8N2C3 Y_RNA.567-201ENST00000384736 106 ntBASIC2.36□□□□□ -2.03
DEPDC4Q8N2C3 RNU1-41P-201ENST00000516161 162 ntBASIC2.36□□□□□ -2.03
DEPDC4Q8N2C3 RNU1-48P-201ENST00000516400 162 ntBASIC2.36□□□□□ -2.03
DEPDC4Q8N2C3 AC121758.2-201ENST00000553271 193 ntBASIC2.36□□□□□ -2.03
DEPDC4Q8N2C3 RNU6-86P-201ENST00000606534 107 ntBASIC2.36□□□□□ -2.03
DEPDC4Q8N2C3 MIR7843-201ENST00000622274 79 ntBASIC2.36□□□□□ -2.03
DEPDC4Q8N2C3 Y_RNA.173-201ENST00000363776 113 ntBASIC2.35□□□□□ -2.03
DEPDC4Q8N2C3 Y_RNA.190-201ENST00000363964 101 ntBASIC2.35□□□□□ -2.03
DEPDC4Q8N2C3 RNU6-675P-201ENST00000384236 104 ntBASIC2.35□□□□□ -2.03
DEPDC4Q8N2C3 AC027119.1-201ENST00000440877 241 ntBASIC2.35□□□□□ -2.03
DEPDC4Q8N2C3 HMGN2P23-201ENST00000456759 269 ntBASIC2.35□□□□□ -2.03
DEPDC4Q8N2C3 snoU13.25-201ENST00000458945 104 ntBASIC2.35□□□□□ -2.03
DEPDC4Q8N2C3 AL627230.6-201ENST00000611129 280 ntBASIC2.35□□□□□ -2.03
DEPDC4Q8N2C3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.35□□□□□ -2.03
DEPDC4Q8N2C3 MIR8063-201ENST00000621930 81 ntBASIC2.35□□□□□ -2.03
DEPDC4Q8N2C3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.35□□□□□ -2.03
DEPDC4Q8N2C3 AL596028.1-201ENST00000326971 197 ntBASIC2.34□□□□□ -2.03
DEPDC4Q8N2C3 RNY1P10-201ENST00000363268 113 ntBASIC2.34□□□□□ -2.03
DEPDC4Q8N2C3 SNORD1A-201ENST00000364968 72 ntBASIC2.34□□□□□ -2.03
DEPDC4Q8N2C3 SNORA67.3-201ENST00000384366 140 ntBASIC2.34□□□□□ -2.03
DEPDC4Q8N2C3 RNU6-1065P-201ENST00000384513 106 ntBASIC2.34□□□□□ -2.03
DEPDC4Q8N2C3 MIR504-201ENST00000385065 83 ntBASIC2.34□□□□□ -2.03
DEPDC4Q8N2C3 RNU6-613P-201ENST00000410412 108 ntBASIC2.34□□□□□ -2.03
DEPDC4Q8N2C3 AC079140.2-201ENST00000506193 142 ntBASIC2.34□□□□□ -2.03
DEPDC4Q8N2C3 MIR4524B-201ENST00000581569 115 ntBASIC2.34□□□□□ -2.03
DEPDC4Q8N2C3 SNORA4-201ENST00000584302 138 ntBASIC2.34□□□□□ -2.03
DEPDC4Q8N2C3 AC103810.7-201ENST00000607821 91 ntBASIC2.34□□□□□ -2.03
DEPDC4Q8N2C3 SEPT14P17-201ENST00000617978 177 ntBASIC2.34□□□□□ -2.03
DEPDC4Q8N2C3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
DEPDC4Q8N2C3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
DEPDC4Q8N2C3 RNA5SP264-201ENST00000363115 107 ntBASIC2.33□□□□□ -2.04
DEPDC4Q8N2C3 SNORA25.3-201ENST00000363205 127 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms