Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 AC004812.1-201ENST00000540773 146 ntBASIC2.21□□□□□ -2.06
USP48Q86UV5 DNAJC19P9-201ENST00000555084 351 ntBASIC2.21□□□□□ -2.06
USP48Q86UV5 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.21□□□□□ -2.06
USP48Q86UV5 AL357312.1-201ENST00000603879 298 ntBASIC2.21□□□□□ -2.06
USP48Q86UV5 MIR4791-201ENST00000607666 84 ntBASIC2.21□□□□□ -2.06
USP48Q86UV5 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
USP48Q86UV5 SNORD33-201ENST00000362761 85 ntBASIC2.2□□□□□ -2.06
USP48Q86UV5 SNORD41-201ENST00000386967 70 ntBASIC2.2□□□□□ -2.06
USP48Q86UV5 RNU6-913P-201ENST00000390913 95 ntBASIC2.2□□□□□ -2.06
USP48Q86UV5 RNU6-1190P-201ENST00000410811 104 ntBASIC2.2□□□□□ -2.06
USP48Q86UV5 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.2□□□□□ -2.06
USP48Q86UV5 Y_RNA.677-201ENST00000516401 85 ntBASIC2.2□□□□□ -2.06
USP48Q86UV5 RNU6-958P-201ENST00000516995 106 ntBASIC2.2□□□□□ -2.06
USP48Q86UV5 AC008133.2-201ENST00000624540 351 ntBASIC2.2□□□□□ -2.06
USP48Q86UV5 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
USP48Q86UV5 AP000648.3-201ENST00000623539 4507 ntBASIC2.19□□□□□ -2.06
USP48Q86UV5 MIR302D-201ENST00000362275 68 ntBASIC2.19□□□□□ -2.06
USP48Q86UV5 Y_RNA.171-201ENST00000363760 102 ntBASIC2.19□□□□□ -2.06
USP48Q86UV5 Y_RNA.531-201ENST00000384589 121 ntBASIC2.19□□□□□ -2.06
USP48Q86UV5 RNU6-1319P-201ENST00000390855 104 ntBASIC2.19□□□□□ -2.06
USP48Q86UV5 RNU6-747P-201ENST00000390928 104 ntBASIC2.19□□□□□ -2.06
USP48Q86UV5 RNU6-241P-201ENST00000391148 104 ntBASIC2.19□□□□□ -2.06
USP48Q86UV5 MIR1302-5-201ENST00000408164 150 ntBASIC2.19□□□□□ -2.06
USP48Q86UV5 RNU6-177P-201ENST00000411257 104 ntBASIC2.19□□□□□ -2.06
USP48Q86UV5 MIR1270-201ENST00000459320 83 ntBASIC2.19□□□□□ -2.06
USP48Q86UV5 RPS23P4-201ENST00000487908 423 ntBASIC2.19□□□□□ -2.06
USP48Q86UV5 AC008834.1-201ENST00000511612 175 ntBASIC2.19□□□□□ -2.06
USP48Q86UV5 SNORD111.1-201ENST00000516421 86 ntBASIC2.19□□□□□ -2.06
USP48Q86UV5 RNU7-6P-201ENST00000516845 62 ntBASIC2.19□□□□□ -2.06
USP48Q86UV5 Y_RNA.773-201ENST00000607168 90 ntBASIC2.19□□□□□ -2.06
USP48Q86UV5 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
USP48Q86UV5 MIR6841-201ENST00000637129 72 ntBASIC2.19□□□□□ -2.06
USP48Q86UV5 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
USP48Q86UV5 Y_RNA.49-201ENST00000362714 112 ntBASIC2.18□□□□□ -2.06
USP48Q86UV5 MIR590-201ENST00000385008 97 ntBASIC2.18□□□□□ -2.06
USP48Q86UV5 SNORA67.5-201ENST00000391036 107 ntBASIC2.18□□□□□ -2.06
USP48Q86UV5 RNU7-95P-201ENST00000459222 64 ntBASIC2.18□□□□□ -2.06
USP48Q86UV5 AC079140.2-201ENST00000506193 142 ntBASIC2.18□□□□□ -2.06
USP48Q86UV5 MIR3163-201ENST00000581592 73 ntBASIC2.18□□□□□ -2.06
USP48Q86UV5 GHRLOS.1-201ENST00000610995 70 ntBASIC2.18□□□□□ -2.06
USP48Q86UV5 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.18□□□□□ -2.06
USP48Q86UV5 Y_RNA.224-201ENST00000364308 111 ntBASIC2.17□□□□□ -2.06
USP48Q86UV5 SNORD1A-201ENST00000364968 72 ntBASIC2.17□□□□□ -2.06
USP48Q86UV5 MIR759-201ENST00000390224 91 ntBASIC2.17□□□□□ -2.06
USP48Q86UV5 RNY4P30-201ENST00000410216 95 ntBASIC2.17□□□□□ -2.06
USP48Q86UV5 RNU7-73P-201ENST00000458743 63 ntBASIC2.17□□□□□ -2.06
USP48Q86UV5 RNU6-109P-201ENST00000516364 107 ntBASIC2.17□□□□□ -2.06
USP48Q86UV5 RNU6-184P-201ENST00000516514 107 ntBASIC2.17□□□□□ -2.06
USP48Q86UV5 SNORD115-2-201ENST00000362842 82 ntBASIC2.16□□□□□ -2.06
USP48Q86UV5 SNORD115-20-201ENST00000365099 82 ntBASIC2.16□□□□□ -2.06
USP48Q86UV5 Y_RNA.369-201ENST00000365568 117 ntBASIC2.16□□□□□ -2.06
USP48Q86UV5 Y_RNA.470-201ENST00000384307 117 ntBASIC2.16□□□□□ -2.06
USP48Q86UV5 snoU13.18-201ENST00000459483 104 ntBASIC2.16□□□□□ -2.06
USP48Q86UV5 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.16□□□□□ -2.06
USP48Q86UV5 MIR3618-201ENST00000580330 88 ntBASIC2.16□□□□□ -2.06
USP48Q86UV5 AC006254.2-201ENST00000603259 279 ntBASIC2.16□□□□□ -2.06
USP48Q86UV5 MIR1255B1-201ENST00000636325 63 ntBASIC2.16□□□□□ -2.06
USP48Q86UV5 AL162726.3-218ENST00000636401 95 ntBASIC2.16□□□□□ -2.06
USP48Q86UV5 SNORA16.1-201ENST00000364597 132 ntBASIC2.15□□□□□ -2.07
USP48Q86UV5 RNU6-1065P-201ENST00000384513 106 ntBASIC2.15□□□□□ -2.07
USP48Q86UV5 snoU13.16-201ENST00000459350 104 ntBASIC2.15□□□□□ -2.07
USP48Q86UV5 AC019176.1-201ENST00000518519 225 ntBASIC2.15□□□□□ -2.07
USP48Q86UV5 AL020996.3-201ENST00000606617 222 ntBASIC2.15□□□□□ -2.07
USP48Q86UV5 MIR6717-201ENST00000622747 73 ntBASIC2.15□□□□□ -2.07
USP48Q86UV5 SNORD48-201ENST00000364953 64 ntBASIC2.14□□□□□ -2.07
USP48Q86UV5 MIR934-201ENST00000401241 83 ntBASIC2.14□□□□□ -2.07
USP48Q86UV5 RNA5SP261-201ENST00000410536 106 ntBASIC2.14□□□□□ -2.07
USP48Q86UV5 AL022718.1-201ENST00000412004 84 ntBASIC2.14□□□□□ -2.07
USP48Q86UV5 AL353813.1-201ENST00000440700 253 ntBASIC2.14□□□□□ -2.07
USP48Q86UV5 AC113410.1-201ENST00000505029 247 ntBASIC2.14□□□□□ -2.07
USP48Q86UV5 RNU6-904P-201ENST00000516206 101 ntBASIC2.14□□□□□ -2.07
USP48Q86UV5 MIR3937-201ENST00000580135 106 ntBASIC2.14□□□□□ -2.07
USP48Q86UV5 MIR8055-201ENST00000610739 97 ntBASIC2.14□□□□□ -2.07
USP48Q86UV5 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
USP48Q86UV5 Y_RNA.78-201ENST00000362970 110 ntBASIC2.13□□□□□ -2.07
USP48Q86UV5 SNORD115-19-201ENST00000363098 82 ntBASIC2.13□□□□□ -2.07
USP48Q86UV5 SNORD115-18-201ENST00000363293 82 ntBASIC2.13□□□□□ -2.07
USP48Q86UV5 RNA5SP48-201ENST00000363969 126 ntBASIC2.13□□□□□ -2.07
USP48Q86UV5 SNORD115-17-201ENST00000364612 82 ntBASIC2.13□□□□□ -2.07
USP48Q86UV5 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.13□□□□□ -2.07
USP48Q86UV5 RNU7-41P-201ENST00000515917 61 ntBASIC2.13□□□□□ -2.07
USP48Q86UV5 MIR4419B-201ENST00000577260 68 ntBASIC2.13□□□□□ -2.07
USP48Q86UV5 MIR502-201ENST00000606349 86 ntBASIC2.13□□□□□ -2.07
USP48Q86UV5 AL512598.1-201ENST00000610158 273 ntBASIC2.13□□□□□ -2.07
USP48Q86UV5 MIR4251-201ENST00000635819 61 ntBASIC2.13□□□□□ -2.07
USP48Q86UV5 MIR488-201ENST00000365739 83 ntBASIC2.12□□□□□ -2.07
USP48Q86UV5 Y_RNA.430-201ENST00000384081 110 ntBASIC2.12□□□□□ -2.07
USP48Q86UV5 RNU6-816P-201ENST00000390914 107 ntBASIC2.12□□□□□ -2.07
USP48Q86UV5 RNU6-1268P-201ENST00000391214 107 ntBASIC2.12□□□□□ -2.07
USP48Q86UV5 RNU6-1239P-201ENST00000391310 107 ntBASIC2.12□□□□□ -2.07
USP48Q86UV5 HMGN1P33-201ENST00000432945 451 ntBASIC2.12□□□□□ -2.07
USP48Q86UV5 AC027119.1-201ENST00000440877 241 ntBASIC2.12□□□□□ -2.07
USP48Q86UV5 RPL39P39-201ENST00000455840 151 ntBASIC2.12□□□□□ -2.07
USP48Q86UV5 MIR3152-201ENST00000579801 74 ntBASIC2.12□□□□□ -2.07
USP48Q86UV5 SNORA4-201ENST00000584302 138 ntBASIC2.12□□□□□ -2.07
USP48Q86UV5 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.11□□□□□ -2.07
USP48Q86UV5 SNORA22.1-201ENST00000362701 134 ntBASIC2.11□□□□□ -2.07
USP48Q86UV5 Y_RNA.327-201ENST00000365201 102 ntBASIC2.11□□□□□ -2.07
USP48Q86UV5 RNU6-49P-201ENST00000384256 107 ntBASIC2.11□□□□□ -2.07
USP48Q86UV5 MIR1276-201ENST00000408707 83 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms