Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.34□□□□□ -2.19
KRT28Q7Z3Y7 RNA5SP395-201ENST00000516567 118 ntBASIC1.34□□□□□ -2.19
KRT28Q7Z3Y7 AL022345.2-201ENST00000606307 135 ntBASIC1.34□□□□□ -2.19
KRT28Q7Z3Y7 AP001340.1-201ENST00000624405 217 ntBASIC1.34□□□□□ -2.19
KRT28Q7Z3Y7 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
KRT28Q7Z3Y7 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
KRT28Q7Z3Y7 SNORA1.1-201ENST00000364671 133 ntBASIC1.33□□□□□ -2.2
KRT28Q7Z3Y7 RNU6-746P-201ENST00000384112 109 ntBASIC1.33□□□□□ -2.2
KRT28Q7Z3Y7 AL603914.1-201ENST00000401964 204 ntBASIC1.33□□□□□ -2.2
KRT28Q7Z3Y7 RNA5SP261-201ENST00000410536 106 ntBASIC1.33□□□□□ -2.2
KRT28Q7Z3Y7 MTATP6P21-201ENST00000440681 189 ntBASIC1.33□□□□□ -2.2
KRT28Q7Z3Y7 MIR2115-201ENST00000516657 100 ntBASIC1.33□□□□□ -2.2
KRT28Q7Z3Y7 MIR3152-201ENST00000579801 74 ntBASIC1.33□□□□□ -2.2
KRT28Q7Z3Y7 RNU6-349P-201ENST00000362402 107 ntBASIC1.32□□□□□ -2.2
KRT28Q7Z3Y7 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.32□□□□□ -2.2
KRT28Q7Z3Y7 MRPL35P3-201ENST00000421557 364 ntBASIC1.32□□□□□ -2.2
KRT28Q7Z3Y7 MIR6841-201ENST00000637129 72 ntBASIC1.32□□□□□ -2.2
KRT28Q7Z3Y7 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
KRT28Q7Z3Y7 SNORD50.2-201ENST00000365465 70 ntBASIC1.31□□□□□ -2.2
KRT28Q7Z3Y7 Y_RNA.430-201ENST00000384081 110 ntBASIC1.31□□□□□ -2.2
KRT28Q7Z3Y7 SNORA20-201ENST00000384662 132 ntBASIC1.31□□□□□ -2.2
KRT28Q7Z3Y7 SNORD38B-201ENST00000384690 67 ntBASIC1.31□□□□□ -2.2
KRT28Q7Z3Y7 SNORD12-201ENST00000391002 90 ntBASIC1.31□□□□□ -2.2
KRT28Q7Z3Y7 SNORA75.2-201ENST00000391138 150 ntBASIC1.31□□□□□ -2.2
KRT28Q7Z3Y7 SNORA75.3-201ENST00000391231 150 ntBASIC1.31□□□□□ -2.2
KRT28Q7Z3Y7 Y_RNA.651-201ENST00000459380 103 ntBASIC1.31□□□□□ -2.2
KRT28Q7Z3Y7 RNU7-45P-201ENST00000459460 63 ntBASIC1.31□□□□□ -2.2
KRT28Q7Z3Y7 SNORD79.1-201ENST00000516069 84 ntBASIC1.31□□□□□ -2.2
KRT28Q7Z3Y7 SNORA25.12-201ENST00000516202 82 ntBASIC1.31□□□□□ -2.2
KRT28Q7Z3Y7 Y_RNA.703-201ENST00000516846 111 ntBASIC1.31□□□□□ -2.2
KRT28Q7Z3Y7 RNA5SP330-201ENST00000517096 96 ntBASIC1.31□□□□□ -2.2
KRT28Q7Z3Y7 MIR4698-201ENST00000577795 80 ntBASIC1.31□□□□□ -2.2
KRT28Q7Z3Y7 AC011603.4-201ENST00000611325 277 ntBASIC1.31□□□□□ -2.2
KRT28Q7Z3Y7 SEPT14P17-201ENST00000617978 177 ntBASIC1.31□□□□□ -2.2
KRT28Q7Z3Y7 SNORD38B-202ENST00000625943 69 ntBASIC1.31□□□□□ -2.2
KRT28Q7Z3Y7 Y_RNA.280-201ENST00000364765 112 ntBASIC1.3□□□□□ -2.2
KRT28Q7Z3Y7 Y_RNA.488-201ENST00000384403 102 ntBASIC1.3□□□□□ -2.2
KRT28Q7Z3Y7 MT-TN-201ENST00000387400 73 ntBASIC1.3□□□□□ -2.2
KRT28Q7Z3Y7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
KRT28Q7Z3Y7 RNU6-1319P-201ENST00000390855 104 ntBASIC1.3□□□□□ -2.2
KRT28Q7Z3Y7 RNU6-747P-201ENST00000390928 104 ntBASIC1.3□□□□□ -2.2
KRT28Q7Z3Y7 RNU6-241P-201ENST00000391148 104 ntBASIC1.3□□□□□ -2.2
KRT28Q7Z3Y7 RNU6-1190P-201ENST00000410811 104 ntBASIC1.3□□□□□ -2.2
KRT28Q7Z3Y7 RNU6-177P-201ENST00000411257 104 ntBASIC1.3□□□□□ -2.2
KRT28Q7Z3Y7 AC090844.1-201ENST00000422019 156 ntBASIC1.3□□□□□ -2.2
KRT28Q7Z3Y7 RNU7-90P-201ENST00000459216 62 ntBASIC1.3□□□□□ -2.2
KRT28Q7Z3Y7 RNU7-40P-201ENST00000516397 64 ntBASIC1.3□□□□□ -2.2
KRT28Q7Z3Y7 Y_RNA.686-201ENST00000516548 134 ntBASIC1.3□□□□□ -2.2
KRT28Q7Z3Y7 AP000753.3-201ENST00000604083 169 ntBASIC1.3□□□□□ -2.2
KRT28Q7Z3Y7 AL109933.3-201ENST00000619095 188 ntBASIC1.3□□□□□ -2.2
KRT28Q7Z3Y7 MIR6516-201ENST00000630554 81 ntBASIC1.3□□□□□ -2.2
KRT28Q7Z3Y7 AC008163.1-202ENST00000636004 2889 ntBASIC1.3□□□□□ -2.2
KRT28Q7Z3Y7 RNA5SP257-201ENST00000363023 116 ntBASIC1.29□□□□□ -2.2
KRT28Q7Z3Y7 RNU6-939P-201ENST00000384634 107 ntBASIC1.29□□□□□ -2.2
KRT28Q7Z3Y7 Y_RNA.568-201ENST00000384742 113 ntBASIC1.29□□□□□ -2.2
KRT28Q7Z3Y7 RNU6-460P-201ENST00000391158 108 ntBASIC1.29□□□□□ -2.2
KRT28Q7Z3Y7 RNU6-613P-201ENST00000410412 108 ntBASIC1.29□□□□□ -2.2
KRT28Q7Z3Y7 RNU7-21P-201ENST00000459430 62 ntBASIC1.29□□□□□ -2.2
KRT28Q7Z3Y7 HAR1A.1-201ENST00000459583 118 ntBASIC1.29□□□□□ -2.2
KRT28Q7Z3Y7 RNU5E-3P-201ENST00000515913 68 ntBASIC1.29□□□□□ -2.2
KRT28Q7Z3Y7 RNU6-346P-201ENST00000516288 111 ntBASIC1.29□□□□□ -2.2
KRT28Q7Z3Y7 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.29□□□□□ -2.2
KRT28Q7Z3Y7 MIR6717-201ENST00000622747 73 ntBASIC1.29□□□□□ -2.2
KRT28Q7Z3Y7 AC027335.2-201ENST00000624030 375 ntBASIC1.29□□□□□ -2.2
KRT28Q7Z3Y7 MIR924-201ENST00000638017 53 ntBASIC1.29□□□□□ -2.2
KRT28Q7Z3Y7 MIR377-201ENST00000362145 69 ntBASIC1.28□□□□□ -2.2
KRT28Q7Z3Y7 RNA5SP62-201ENST00000363457 110 ntBASIC1.28□□□□□ -2.2
KRT28Q7Z3Y7 RNY1P6-201ENST00000384193 109 ntBASIC1.28□□□□□ -2.2
KRT28Q7Z3Y7 RPS3AP1-201ENST00000413190 320 ntBASIC1.28□□□□□ -2.2
KRT28Q7Z3Y7 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.28□□□□□ -2.2
KRT28Q7Z3Y7 RNU6-426P-201ENST00000516464 97 ntBASIC1.28□□□□□ -2.2
KRT28Q7Z3Y7 AC021613.1-201ENST00000623880 111 ntBASIC1.28□□□□□ -2.2
KRT28Q7Z3Y7 Y_RNA.85-201ENST00000363014 111 ntBASIC1.27□□□□□ -2.21
KRT28Q7Z3Y7 RNU4-16P-201ENST00000364737 141 ntBASIC1.27□□□□□ -2.21
KRT28Q7Z3Y7 RNU6-580P-201ENST00000365159 107 ntBASIC1.27□□□□□ -2.21
KRT28Q7Z3Y7 Y_RNA.420-201ENST00000384043 110 ntBASIC1.27□□□□□ -2.21
KRT28Q7Z3Y7 SNORA2B-201ENST00000384583 137 ntBASIC1.27□□□□□ -2.21
KRT28Q7Z3Y7 AC063976.4-201ENST00000421971 163 ntBASIC1.27□□□□□ -2.21
KRT28Q7Z3Y7 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.27□□□□□ -2.21
KRT28Q7Z3Y7 RNA5SP121-201ENST00000516537 101 ntBASIC1.27□□□□□ -2.21
KRT28Q7Z3Y7 Y_RNA.690-201ENST00000516603 95 ntBASIC1.27□□□□□ -2.21
KRT28Q7Z3Y7 AC023827.1-201ENST00000569247 97 ntBASIC1.27□□□□□ -2.21
KRT28Q7Z3Y7 MIR3121-201ENST00000579680 77 ntBASIC1.27□□□□□ -2.21
KRT28Q7Z3Y7 MIR4714-201ENST00000580728 77 ntBASIC1.27□□□□□ -2.21
KRT28Q7Z3Y7 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.27□□□□□ -2.21
KRT28Q7Z3Y7 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
KRT28Q7Z3Y7 RNU6-508P-201ENST00000363231 103 ntBASIC1.26□□□□□ -2.21
KRT28Q7Z3Y7 RNU6-654P-201ENST00000364373 107 ntBASIC1.26□□□□□ -2.21
KRT28Q7Z3Y7 RNU6-309P-201ENST00000364573 106 ntBASIC1.26□□□□□ -2.21
KRT28Q7Z3Y7 Y_RNA.258-201ENST00000364613 105 ntBASIC1.26□□□□□ -2.21
KRT28Q7Z3Y7 RNU6-915P-201ENST00000364943 103 ntBASIC1.26□□□□□ -2.21
KRT28Q7Z3Y7 RNU6-602P-201ENST00000411155 105 ntBASIC1.26□□□□□ -2.21
KRT28Q7Z3Y7 AC244023.1-201ENST00000426884 112 ntBASIC1.26□□□□□ -2.21
KRT28Q7Z3Y7 RN7SKP179-201ENST00000516126 217 ntBASIC1.26□□□□□ -2.21
KRT28Q7Z3Y7 MIR3133-201ENST00000583157 78 ntBASIC1.26□□□□□ -2.21
KRT28Q7Z3Y7 HSPE1P19-201ENST00000603327 295 ntBASIC1.26□□□□□ -2.21
KRT28Q7Z3Y7 AC242498.1-201ENST00000604134 111 ntBASIC1.26□□□□□ -2.21
KRT28Q7Z3Y7 RNU6-690P-201ENST00000365242 106 ntBASIC1.25□□□□□ -2.21
KRT28Q7Z3Y7 Y_RNA.343-201ENST00000365354 112 ntBASIC1.25□□□□□ -2.21
KRT28Q7Z3Y7 MIR19B1-201ENST00000384829 87 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms