Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC021613.1-201ENST00000623880 111 ntBASIC0.66□□□□□ -2.3
NUP54Q7Z3B4 MIR6841-201ENST00000637129 72 ntBASIC0.66□□□□□ -2.3
NUP54Q7Z3B4 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
NUP54Q7Z3B4 MIR30D-201ENST00000362283 70 ntBASIC0.65□□□□□ -2.31
NUP54Q7Z3B4 Y_RNA.274-201ENST00000364714 101 ntBASIC0.65□□□□□ -2.31
NUP54Q7Z3B4 Y_RNA.393-201ENST00000383936 102 ntBASIC0.65□□□□□ -2.31
NUP54Q7Z3B4 MIR520H-201ENST00000385126 88 ntBASIC0.65□□□□□ -2.31
NUP54Q7Z3B4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
NUP54Q7Z3B4 MIR938-201ENST00000401216 83 ntBASIC0.65□□□□□ -2.31
NUP54Q7Z3B4 MIR548J-201ENST00000408833 112 ntBASIC0.65□□□□□ -2.31
NUP54Q7Z3B4 AC107027.2-201ENST00000512197 115 ntBASIC0.65□□□□□ -2.31
NUP54Q7Z3B4 AL590095.2-201ENST00000604136 117 ntBASIC0.65□□□□□ -2.31
NUP54Q7Z3B4 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.65□□□□□ -2.31
NUP54Q7Z3B4 MIR573-201ENST00000384964 99 ntBASIC0.64□□□□□ -2.31
NUP54Q7Z3B4 MTND5P15-201ENST00000434246 349 ntBASIC0.64□□□□□ -2.31
NUP54Q7Z3B4 RNU7-56P-201ENST00000458744 62 ntBASIC0.64□□□□□ -2.31
NUP54Q7Z3B4 RNU7-185P-201ENST00000459215 60 ntBASIC0.64□□□□□ -2.31
NUP54Q7Z3B4 RNU6-1219P-201ENST00000516143 112 ntBASIC0.64□□□□□ -2.31
NUP54Q7Z3B4 AC018659.1-201ENST00000551083 169 ntBASIC0.64□□□□□ -2.31
NUP54Q7Z3B4 AC133485.1-201ENST00000567176 124 ntBASIC0.64□□□□□ -2.31
NUP54Q7Z3B4 AC138907.6-201ENST00000568401 126 ntBASIC0.64□□□□□ -2.31
NUP54Q7Z3B4 AC072026.1-201ENST00000605023 201 ntBASIC0.64□□□□□ -2.31
NUP54Q7Z3B4 RNU6-379P-201ENST00000363813 104 ntBASIC0.63□□□□□ -2.31
NUP54Q7Z3B4 Y_RNA.337-201ENST00000365312 102 ntBASIC0.63□□□□□ -2.31
NUP54Q7Z3B4 Y_RNA.552-201ENST00000384665 112 ntBASIC0.63□□□□□ -2.31
NUP54Q7Z3B4 MIR125B2-201ENST00000385128 89 ntBASIC0.63□□□□□ -2.31
NUP54Q7Z3B4 snosnR66.1-201ENST00000391095 99 ntBASIC0.63□□□□□ -2.31
NUP54Q7Z3B4 MIR1257-201ENST00000408490 117 ntBASIC0.63□□□□□ -2.31
NUP54Q7Z3B4 RNU6-893P-201ENST00000458841 100 ntBASIC0.63□□□□□ -2.31
NUP54Q7Z3B4 Y_RNA.644-201ENST00000459006 113 ntBASIC0.63□□□□□ -2.31
NUP54Q7Z3B4 Y_RNA.674-201ENST00000516362 113 ntBASIC0.63□□□□□ -2.31
NUP54Q7Z3B4 MIR151B-201ENST00000584249 96 ntBASIC0.63□□□□□ -2.31
NUP54Q7Z3B4 MTND5P32-201ENST00000560711 1802 ntBASIC0.63□□□□□ -2.31
NUP54Q7Z3B4 SNORA22.1-201ENST00000362701 134 ntBASIC0.62□□□□□ -2.31
NUP54Q7Z3B4 Y_RNA.297-201ENST00000364950 91 ntBASIC0.62□□□□□ -2.31
NUP54Q7Z3B4 RNU6-768P-201ENST00000384683 107 ntBASIC0.62□□□□□ -2.31
NUP54Q7Z3B4 RNA5SP237-201ENST00000410414 113 ntBASIC0.62□□□□□ -2.31
NUP54Q7Z3B4 RNA5SP220-201ENST00000516298 104 ntBASIC0.62□□□□□ -2.31
NUP54Q7Z3B4 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.62□□□□□ -2.31
NUP54Q7Z3B4 AL078603.1-201ENST00000603824 313 ntBASIC0.62□□□□□ -2.31
NUP54Q7Z3B4 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.62□□□□□ -2.31
NUP54Q7Z3B4 RNY1P6-201ENST00000384193 109 ntBASIC0.61□□□□□ -2.31
NUP54Q7Z3B4 Y_RNA.476-201ENST00000384347 108 ntBASIC0.61□□□□□ -2.31
NUP54Q7Z3B4 MIR508-201ENST00000384857 115 ntBASIC0.61□□□□□ -2.31
NUP54Q7Z3B4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.61□□□□□ -2.31
NUP54Q7Z3B4 RNU4-54P-201ENST00000516428 129 ntBASIC0.61□□□□□ -2.31
NUP54Q7Z3B4 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.61□□□□□ -2.31
NUP54Q7Z3B4 SNORA4-201ENST00000584302 138 ntBASIC0.61□□□□□ -2.31
NUP54Q7Z3B4 AL662814.1-201ENST00000617364 121 ntBASIC0.61□□□□□ -2.31
NUP54Q7Z3B4 Y_RNA.52-201ENST00000362760 96 ntBASIC0.6□□□□□ -2.31
NUP54Q7Z3B4 Y_RNA.116-201ENST00000363292 103 ntBASIC0.6□□□□□ -2.31
NUP54Q7Z3B4 RNU6-200P-201ENST00000364743 107 ntBASIC0.6□□□□□ -2.31
NUP54Q7Z3B4 RNU4-45P-201ENST00000365469 141 ntBASIC0.6□□□□□ -2.31
NUP54Q7Z3B4 RNU6-1336P-201ENST00000383886 109 ntBASIC0.6□□□□□ -2.31
NUP54Q7Z3B4 RNU6-364P-201ENST00000384387 107 ntBASIC0.6□□□□□ -2.31
NUP54Q7Z3B4 RNU6-447P-201ENST00000410293 104 ntBASIC0.6□□□□□ -2.31
NUP54Q7Z3B4 RNU6-1118P-201ENST00000410382 104 ntBASIC0.6□□□□□ -2.31
NUP54Q7Z3B4 RNU6-1076P-201ENST00000410397 104 ntBASIC0.6□□□□□ -2.31
NUP54Q7Z3B4 RNU6-355P-201ENST00000410427 104 ntBASIC0.6□□□□□ -2.31
NUP54Q7Z3B4 RNU6-791P-201ENST00000410467 104 ntBASIC0.6□□□□□ -2.31
NUP54Q7Z3B4 RNU6-705P-201ENST00000410601 104 ntBASIC0.6□□□□□ -2.31
NUP54Q7Z3B4 RNU6-1100P-201ENST00000410691 104 ntBASIC0.6□□□□□ -2.31
NUP54Q7Z3B4 RNU6-860P-201ENST00000410860 104 ntBASIC0.6□□□□□ -2.31
NUP54Q7Z3B4 RNA5SP222-201ENST00000411039 105 ntBASIC0.6□□□□□ -2.31
NUP54Q7Z3B4 Y_RNA.793-201ENST00000411222 111 ntBASIC0.6□□□□□ -2.31
NUP54Q7Z3B4 RNU6-1217P-201ENST00000411276 104 ntBASIC0.6□□□□□ -2.31
NUP54Q7Z3B4 RNU6-785P-201ENST00000411324 104 ntBASIC0.6□□□□□ -2.31
NUP54Q7Z3B4 RNU6-1223P-201ENST00000517124 104 ntBASIC0.6□□□□□ -2.31
NUP54Q7Z3B4 AC022559.1-201ENST00000520905 205 ntBASIC0.6□□□□□ -2.31
NUP54Q7Z3B4 MIR5000-201ENST00000577717 103 ntBASIC0.6□□□□□ -2.31
NUP54Q7Z3B4 MIR3646-201ENST00000578301 84 ntBASIC0.6□□□□□ -2.31
NUP54Q7Z3B4 SNORD92-201ENST00000585078 85 ntBASIC0.6□□□□□ -2.31
NUP54Q7Z3B4 U6.90-201ENST00000614007 104 ntBASIC0.6□□□□□ -2.31
NUP54Q7Z3B4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.6□□□□□ -2.31
NUP54Q7Z3B4 U6.70-201ENST00000620287 104 ntBASIC0.6□□□□□ -2.31
NUP54Q7Z3B4 AC078938.1-201ENST00000620993 318 ntBASIC0.6□□□□□ -2.31
NUP54Q7Z3B4 RNU6-1082P-201ENST00000364574 107 ntBASIC0.59□□□□□ -2.31
NUP54Q7Z3B4 RNU6-818P-201ENST00000364837 108 ntBASIC0.59□□□□□ -2.31
NUP54Q7Z3B4 Y_RNA.357-201ENST00000365487 109 ntBASIC0.59□□□□□ -2.31
NUP54Q7Z3B4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
NUP54Q7Z3B4 MIR518E-201ENST00000385252 88 ntBASIC0.59□□□□□ -2.31
NUP54Q7Z3B4 SNORA75.5-201ENST00000391291 81 ntBASIC0.59□□□□□ -2.31
NUP54Q7Z3B4 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.59□□□□□ -2.31
NUP54Q7Z3B4 RNU6-388P-201ENST00000517012 105 ntBASIC0.59□□□□□ -2.31
NUP54Q7Z3B4 RNU6-389P-201ENST00000517048 105 ntBASIC0.59□□□□□ -2.31
NUP54Q7Z3B4 RNU7-156P-201ENST00000517214 74 ntBASIC0.59□□□□□ -2.31
NUP54Q7Z3B4 AP002392.1-201ENST00000537692 208 ntBASIC0.59□□□□□ -2.31
NUP54Q7Z3B4 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
NUP54Q7Z3B4 RNU6-1237P-201ENST00000384777 107 ntBASIC0.58□□□□□ -2.32
NUP54Q7Z3B4 RNU6-239P-201ENST00000390990 99 ntBASIC0.58□□□□□ -2.32
NUP54Q7Z3B4 RPL39P25-201ENST00000449384 154 ntBASIC0.58□□□□□ -2.32
NUP54Q7Z3B4 RNU7-102P-201ENST00000458948 62 ntBASIC0.58□□□□□ -2.32
NUP54Q7Z3B4 RNA5SP236-201ENST00000516169 116 ntBASIC0.58□□□□□ -2.32
NUP54Q7Z3B4 Y_RNA.700-201ENST00000516806 100 ntBASIC0.58□□□□□ -2.32
NUP54Q7Z3B4 AC004812.1-201ENST00000540773 146 ntBASIC0.58□□□□□ -2.32
NUP54Q7Z3B4 MIR3612-201ENST00000579753 87 ntBASIC0.58□□□□□ -2.32
NUP54Q7Z3B4 AC090897.1-201ENST00000580909 226 ntBASIC0.58□□□□□ -2.32
NUP54Q7Z3B4 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.58□□□□□ -2.32
NUP54Q7Z3B4 RNU6-349P-201ENST00000362402 107 ntBASIC0.57□□□□□ -2.32
NUP54Q7Z3B4 RNU4-84P-201ENST00000364200 139 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 162.5 ms