Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 MIR30A-201ENST00000385092 71 ntBASIC1.41□□□□□ -2.18
ZNF549Q6P9A3 SNORA17.3-201ENST00000391159 129 ntBASIC1.41□□□□□ -2.18
ZNF549Q6P9A3 AC090844.1-201ENST00000422019 156 ntBASIC1.41□□□□□ -2.18
ZNF549Q6P9A3 snoU13.25-201ENST00000458945 104 ntBASIC1.41□□□□□ -2.18
ZNF549Q6P9A3 RNU7-6P-201ENST00000516845 62 ntBASIC1.41□□□□□ -2.18
ZNF549Q6P9A3 SNORA31.24-201ENST00000517232 57 ntBASIC1.41□□□□□ -2.18
ZNF549Q6P9A3 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.41□□□□□ -2.18
ZNF549Q6P9A3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.41□□□□□ -2.18
ZNF549Q6P9A3 MIR5009-201ENST00000578736 100 ntBASIC1.41□□□□□ -2.18
ZNF549Q6P9A3 MIR548AO-201ENST00000579992 96 ntBASIC1.41□□□□□ -2.18
ZNF549Q6P9A3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.41□□□□□ -2.18
ZNF549Q6P9A3 MIR8065-201ENST00000620577 100 ntBASIC1.41□□□□□ -2.18
ZNF549Q6P9A3 MIR1255B1-201ENST00000636325 63 ntBASIC1.41□□□□□ -2.18
ZNF549Q6P9A3 Z97988.1-201ENST00000637697 135 ntBASIC1.41□□□□□ -2.18
ZNF549Q6P9A3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
ZNF549Q6P9A3 RNU6-766P-201ENST00000362478 107 ntBASIC1.4□□□□□ -2.19
ZNF549Q6P9A3 RNA5SP259-201ENST00000365541 109 ntBASIC1.4□□□□□ -2.19
ZNF549Q6P9A3 Y_RNA.495-201ENST00000384435 112 ntBASIC1.4□□□□□ -2.19
ZNF549Q6P9A3 MIR759-201ENST00000390224 91 ntBASIC1.4□□□□□ -2.19
ZNF549Q6P9A3 MIR934-201ENST00000401241 83 ntBASIC1.4□□□□□ -2.19
ZNF549Q6P9A3 RNU7-113P-201ENST00000459273 62 ntBASIC1.4□□□□□ -2.19
ZNF549Q6P9A3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.4□□□□□ -2.19
ZNF549Q6P9A3 MIR3152-201ENST00000579801 74 ntBASIC1.4□□□□□ -2.19
ZNF549Q6P9A3 MIR548AE2-201ENST00000583456 67 ntBASIC1.4□□□□□ -2.19
ZNF549Q6P9A3 MIR3192-201ENST00000584920 77 ntBASIC1.4□□□□□ -2.19
ZNF549Q6P9A3 AL162726.3-218ENST00000636401 95 ntBASIC1.4□□□□□ -2.19
ZNF549Q6P9A3 Y_RNA.49-201ENST00000362714 112 ntBASIC1.39□□□□□ -2.19
ZNF549Q6P9A3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
ZNF549Q6P9A3 MIR1302-7-201ENST00000408841 72 ntBASIC1.39□□□□□ -2.19
ZNF549Q6P9A3 SNORA19.1-201ENST00000410656 129 ntBASIC1.39□□□□□ -2.19
ZNF549Q6P9A3 RNU4-69P-201ENST00000410677 143 ntBASIC1.39□□□□□ -2.19
ZNF549Q6P9A3 RNU6-602P-201ENST00000411155 105 ntBASIC1.39□□□□□ -2.19
ZNF549Q6P9A3 AL353813.1-201ENST00000440700 253 ntBASIC1.39□□□□□ -2.19
ZNF549Q6P9A3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.39□□□□□ -2.19
ZNF549Q6P9A3 AL513534.2-201ENST00000603836 250 ntBASIC1.39□□□□□ -2.19
ZNF549Q6P9A3 AL096861.1-201ENST00000610899 123 ntBASIC1.39□□□□□ -2.19
ZNF549Q6P9A3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.39□□□□□ -2.19
ZNF549Q6P9A3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.38□□□□□ -2.19
ZNF549Q6P9A3 Y_RNA.309-201ENST00000365046 111 ntBASIC1.38□□□□□ -2.19
ZNF549Q6P9A3 Y_RNA.348-201ENST00000365403 103 ntBASIC1.38□□□□□ -2.19
ZNF549Q6P9A3 RNU6-32P-201ENST00000383948 107 ntBASIC1.38□□□□□ -2.19
ZNF549Q6P9A3 RNU6-756P-201ENST00000383997 107 ntBASIC1.38□□□□□ -2.19
ZNF549Q6P9A3 RNU6-13P-201ENST00000384248 107 ntBASIC1.38□□□□□ -2.19
ZNF549Q6P9A3 RNU6-12P-201ENST00000384604 107 ntBASIC1.38□□□□□ -2.19
ZNF549Q6P9A3 RNU6-41P-201ENST00000384741 107 ntBASIC1.38□□□□□ -2.19
ZNF549Q6P9A3 RNU6-1067P-201ENST00000384752 107 ntBASIC1.38□□□□□ -2.19
ZNF549Q6P9A3 AL451046.2-201ENST00000403074 277 ntBASIC1.38□□□□□ -2.19
ZNF549Q6P9A3 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.38□□□□□ -2.19
ZNF549Q6P9A3 RPS3AP1-201ENST00000413190 320 ntBASIC1.38□□□□□ -2.19
ZNF549Q6P9A3 RNU6-893P-201ENST00000458841 100 ntBASIC1.38□□□□□ -2.19
ZNF549Q6P9A3 AC005908.1-201ENST00000468701 347 ntBASIC1.38□□□□□ -2.19
ZNF549Q6P9A3 RNU6-922P-201ENST00000516753 99 ntBASIC1.38□□□□□ -2.19
ZNF549Q6P9A3 MIR8074-201ENST00000615081 81 ntBASIC1.38□□□□□ -2.19
ZNF549Q6P9A3 MIR4251-201ENST00000635819 61 ntBASIC1.38□□□□□ -2.19
ZNF549Q6P9A3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.38□□□□□ -2.19
ZNF549Q6P9A3 MIR378A-201ENST00000362177 66 ntBASIC1.37□□□□□ -2.19
ZNF549Q6P9A3 RNU6-640P-201ENST00000363693 105 ntBASIC1.37□□□□□ -2.19
ZNF549Q6P9A3 SNORA1.1-201ENST00000364671 133 ntBASIC1.37□□□□□ -2.19
ZNF549Q6P9A3 Y_RNA.299-201ENST00000364973 94 ntBASIC1.37□□□□□ -2.19
ZNF549Q6P9A3 RNU6-905P-201ENST00000384434 107 ntBASIC1.37□□□□□ -2.19
ZNF549Q6P9A3 RNU6-342P-201ENST00000384521 104 ntBASIC1.37□□□□□ -2.19
ZNF549Q6P9A3 RNA5SP261-201ENST00000410536 106 ntBASIC1.37□□□□□ -2.19
ZNF549Q6P9A3 AC009474.2-201ENST00000451383 136 ntBASIC1.37□□□□□ -2.19
ZNF549Q6P9A3 SNORD111.1-201ENST00000516421 86 ntBASIC1.37□□□□□ -2.19
ZNF549Q6P9A3 RNA5SP33-201ENST00000516687 98 ntBASIC1.37□□□□□ -2.19
ZNF549Q6P9A3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
ZNF549Q6P9A3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.36□□□□□ -2.19
ZNF549Q6P9A3 RNU6-363P-201ENST00000362895 105 ntBASIC1.36□□□□□ -2.19
ZNF549Q6P9A3 SNORA51.5-201ENST00000384126 131 ntBASIC1.36□□□□□ -2.19
ZNF549Q6P9A3 MIR590-201ENST00000385008 97 ntBASIC1.36□□□□□ -2.19
ZNF549Q6P9A3 RNU6-816P-201ENST00000390914 107 ntBASIC1.36□□□□□ -2.19
ZNF549Q6P9A3 RNU6-1268P-201ENST00000391214 107 ntBASIC1.36□□□□□ -2.19
ZNF549Q6P9A3 RNU6-1239P-201ENST00000391310 107 ntBASIC1.36□□□□□ -2.19
ZNF549Q6P9A3 MIR1302-5-201ENST00000408164 150 ntBASIC1.36□□□□□ -2.19
ZNF549Q6P9A3 RNA5SP445-201ENST00000515889 115 ntBASIC1.36□□□□□ -2.19
ZNF549Q6P9A3 RNU6-322P-201ENST00000516010 103 ntBASIC1.36□□□□□ -2.19
ZNF549Q6P9A3 MIR7974-201ENST00000615835 79 ntBASIC1.36□□□□□ -2.19
ZNF549Q6P9A3 AP001318.4-201ENST00000616637 121 ntBASIC1.36□□□□□ -2.19
ZNF549Q6P9A3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.36□□□□□ -2.19
ZNF549Q6P9A3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
ZNF549Q6P9A3 Y_RNA.78-201ENST00000362970 110 ntBASIC1.35□□□□□ -2.19
ZNF549Q6P9A3 RNU6-616P-201ENST00000384353 107 ntBASIC1.35□□□□□ -2.19
ZNF549Q6P9A3 RNU4-62P-201ENST00000410125 130 ntBASIC1.35□□□□□ -2.19
ZNF549Q6P9A3 MIR1912-201ENST00000410389 80 ntBASIC1.35□□□□□ -2.19
ZNF549Q6P9A3 RNU6-904P-201ENST00000516206 101 ntBASIC1.35□□□□□ -2.19
ZNF549Q6P9A3 RNA5SP170-201ENST00000517150 101 ntBASIC1.35□□□□□ -2.19
ZNF549Q6P9A3 RNU7-35P-201ENST00000517174 62 ntBASIC1.35□□□□□ -2.19
ZNF549Q6P9A3 AP003716.2-201ENST00000528260 108 ntBASIC1.35□□□□□ -2.19
ZNF549Q6P9A3 AC068338.1-201ENST00000565567 176 ntBASIC1.35□□□□□ -2.19
ZNF549Q6P9A3 MIR4285-201ENST00000581001 85 ntBASIC1.35□□□□□ -2.19
ZNF549Q6P9A3 AL512598.1-201ENST00000610158 273 ntBASIC1.35□□□□□ -2.19
ZNF549Q6P9A3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
ZNF549Q6P9A3 Y_RNA.43-201ENST00000362670 111 ntBASIC1.34□□□□□ -2.19
ZNF549Q6P9A3 SNORD1A-201ENST00000364968 72 ntBASIC1.34□□□□□ -2.19
ZNF549Q6P9A3 Y_RNA.338-201ENST00000365320 114 ntBASIC1.34□□□□□ -2.19
ZNF549Q6P9A3 SNORA32-201ENST00000384072 121 ntBASIC1.34□□□□□ -2.19
ZNF549Q6P9A3 RNU6-679P-201ENST00000391003 106 ntBASIC1.34□□□□□ -2.19
ZNF549Q6P9A3 BTF3P4-201ENST00000418852 495 ntBASIC1.34□□□□□ -2.19
ZNF549Q6P9A3 AC244023.1-201ENST00000426884 112 ntBASIC1.34□□□□□ -2.19
ZNF549Q6P9A3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 221.4 ms