Protein–RNA interactions for Protein: Q6IEG0

SNRNP48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, humanhuman

Known RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48Q6IEG0 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
SNRNP48Q6IEG0 MIR563-201ENST00000385080 79 ntBASIC0.5□□□□□ -2.33
SNRNP48Q6IEG0 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.5□□□□□ -2.33
SNRNP48Q6IEG0 RNU4-43P-201ENST00000410628 137 ntBASIC0.5□□□□□ -2.33
SNRNP48Q6IEG0 Y_RNA.618-201ENST00000410949 107 ntBASIC0.5□□□□□ -2.33
SNRNP48Q6IEG0 RNU7-185P-201ENST00000459215 60 ntBASIC0.5□□□□□ -2.33
SNRNP48Q6IEG0 MIR3612-201ENST00000579753 87 ntBASIC0.5□□□□□ -2.33
SNRNP48Q6IEG0 MIR4744-201ENST00000581563 82 ntBASIC0.5□□□□□ -2.33
SNRNP48Q6IEG0 MIR5197-201ENST00000583721 112 ntBASIC0.5□□□□□ -2.33
SNRNP48Q6IEG0 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.5□□□□□ -2.33
SNRNP48Q6IEG0 MIR30D-201ENST00000362283 70 ntBASIC0.49□□□□□ -2.33
SNRNP48Q6IEG0 MIR18A-201ENST00000362310 71 ntBASIC0.49□□□□□ -2.33
SNRNP48Q6IEG0 Y_RNA.288-201ENST00000364854 92 ntBASIC0.49□□□□□ -2.33
SNRNP48Q6IEG0 RNU6-1292P-201ENST00000383856 107 ntBASIC0.49□□□□□ -2.33
SNRNP48Q6IEG0 RNU6-1237P-201ENST00000384777 107 ntBASIC0.49□□□□□ -2.33
SNRNP48Q6IEG0 MIR125B2-201ENST00000385128 89 ntBASIC0.49□□□□□ -2.33
SNRNP48Q6IEG0 AL121914.1-201ENST00000450188 156 ntBASIC0.49□□□□□ -2.33
SNRNP48Q6IEG0 RNU7-80P-201ENST00000459562 61 ntBASIC0.49□□□□□ -2.33
SNRNP48Q6IEG0 AL365205.2-201ENST00000594586 68 ntBASIC0.49□□□□□ -2.33
SNRNP48Q6IEG0 Y_RNA.308-201ENST00000365043 101 ntBASIC0.48□□□□□ -2.33
SNRNP48Q6IEG0 RNY4P28-201ENST00000365281 93 ntBASIC0.48□□□□□ -2.33
SNRNP48Q6IEG0 MIR140-201ENST00000385282 100 ntBASIC0.48□□□□□ -2.33
SNRNP48Q6IEG0 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.48□□□□□ -2.33
SNRNP48Q6IEG0 AC023932.2-201ENST00000603176 175 ntBASIC0.48□□□□□ -2.33
SNRNP48Q6IEG0 AC008608.1-201ENST00000603910 127 ntBASIC0.48□□□□□ -2.33
SNRNP48Q6IEG0 AC091932.4-201ENST00000623386 200 ntBASIC0.48□□□□□ -2.33
SNRNP48Q6IEG0 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
SNRNP48Q6IEG0 AL596211.1-201ENST00000569873 2277 ntBASIC0.47□□□□□ -2.33
SNRNP48Q6IEG0 RNU6-364P-201ENST00000384387 107 ntBASIC0.47□□□□□ -2.33
SNRNP48Q6IEG0 Y_RNA.562-201ENST00000384695 113 ntBASIC0.47□□□□□ -2.33
SNRNP48Q6IEG0 RNU6-578P-201ENST00000390980 103 ntBASIC0.47□□□□□ -2.33
SNRNP48Q6IEG0 RNU6-493P-201ENST00000391321 108 ntBASIC0.47□□□□□ -2.33
SNRNP48Q6IEG0 MIR1265-201ENST00000408444 86 ntBASIC0.47□□□□□ -2.33
SNRNP48Q6IEG0 MIR1257-201ENST00000408490 117 ntBASIC0.47□□□□□ -2.33
SNRNP48Q6IEG0 MIR548H3-201ENST00000408771 118 ntBASIC0.47□□□□□ -2.33
SNRNP48Q6IEG0 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.47□□□□□ -2.33
SNRNP48Q6IEG0 SEPT7P4-201ENST00000437076 306 ntBASIC0.47□□□□□ -2.33
SNRNP48Q6IEG0 RNU7-102P-201ENST00000458948 62 ntBASIC0.47□□□□□ -2.33
SNRNP48Q6IEG0 RNU7-156P-201ENST00000517214 74 ntBASIC0.47□□□□□ -2.33
SNRNP48Q6IEG0 AL162730.1-201ENST00000605734 292 ntBASIC0.47□□□□□ -2.33
SNRNP48Q6IEG0 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
SNRNP48Q6IEG0 SNORD27-201ENST00000363981 72 ntBASIC0.46□□□□□ -2.34
SNRNP48Q6IEG0 RNU6-597P-201ENST00000365620 102 ntBASIC0.46□□□□□ -2.34
SNRNP48Q6IEG0 Y_RNA.454-201ENST00000384224 113 ntBASIC0.46□□□□□ -2.34
SNRNP48Q6IEG0 MIR568-201ENST00000385036 95 ntBASIC0.46□□□□□ -2.34
SNRNP48Q6IEG0 MT-TF-201ENST00000387314 71 ntBASIC0.46□□□□□ -2.34
SNRNP48Q6IEG0 RNU6-1319P-201ENST00000390855 104 ntBASIC0.46□□□□□ -2.34
SNRNP48Q6IEG0 RNU6-747P-201ENST00000390928 104 ntBASIC0.46□□□□□ -2.34
SNRNP48Q6IEG0 RNU6-241P-201ENST00000391148 104 ntBASIC0.46□□□□□ -2.34
SNRNP48Q6IEG0 RNU6-447P-201ENST00000410293 104 ntBASIC0.46□□□□□ -2.34
SNRNP48Q6IEG0 RNU6-1118P-201ENST00000410382 104 ntBASIC0.46□□□□□ -2.34
SNRNP48Q6IEG0 RNU6-1076P-201ENST00000410397 104 ntBASIC0.46□□□□□ -2.34
SNRNP48Q6IEG0 RNU6-355P-201ENST00000410427 104 ntBASIC0.46□□□□□ -2.34
SNRNP48Q6IEG0 RNU6-791P-201ENST00000410467 104 ntBASIC0.46□□□□□ -2.34
SNRNP48Q6IEG0 RNA5SP261-201ENST00000410536 106 ntBASIC0.46□□□□□ -2.34
SNRNP48Q6IEG0 RNU6-705P-201ENST00000410601 104 ntBASIC0.46□□□□□ -2.34
SNRNP48Q6IEG0 RNU6-1100P-201ENST00000410691 104 ntBASIC0.46□□□□□ -2.34
SNRNP48Q6IEG0 RNU6-860P-201ENST00000410860 104 ntBASIC0.46□□□□□ -2.34
SNRNP48Q6IEG0 RNU6-1217P-201ENST00000411276 104 ntBASIC0.46□□□□□ -2.34
SNRNP48Q6IEG0 RNU6-785P-201ENST00000411324 104 ntBASIC0.46□□□□□ -2.34
SNRNP48Q6IEG0 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.46□□□□□ -2.34
SNRNP48Q6IEG0 AC090897.1-201ENST00000580909 226 ntBASIC0.46□□□□□ -2.34
SNRNP48Q6IEG0 Z83818.1-201ENST00000603584 150 ntBASIC0.46□□□□□ -2.34
SNRNP48Q6IEG0 RNU2-4P-201ENST00000606190 192 ntBASIC0.46□□□□□ -2.34
SNRNP48Q6IEG0 U6.90-201ENST00000614007 104 ntBASIC0.46□□□□□ -2.34
SNRNP48Q6IEG0 U6.70-201ENST00000620287 104 ntBASIC0.46□□□□□ -2.34
SNRNP48Q6IEG0 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.46□□□□□ -2.34
SNRNP48Q6IEG0 Y_RNA.65-201ENST00000362846 100 ntBASIC0.45□□□□□ -2.34
SNRNP48Q6IEG0 Y_RNA.133-201ENST00000363428 110 ntBASIC0.45□□□□□ -2.34
SNRNP48Q6IEG0 RNU6-978P-201ENST00000364371 103 ntBASIC0.45□□□□□ -2.34
SNRNP48Q6IEG0 MTND2P23-201ENST00000422990 651 ntBASIC0.45□□□□□ -2.34
SNRNP48Q6IEG0 MTCYBP9-201ENST00000431021 303 ntBASIC0.45□□□□□ -2.34
SNRNP48Q6IEG0 SNORD116-25-201ENST00000516517 92 ntBASIC0.45□□□□□ -2.34
SNRNP48Q6IEG0 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.45□□□□□ -2.34
SNRNP48Q6IEG0 MIR378D2-201ENST00000580636 98 ntBASIC0.45□□□□□ -2.34
SNRNP48Q6IEG0 SNORD92-201ENST00000585078 85 ntBASIC0.45□□□□□ -2.34
SNRNP48Q6IEG0 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.45□□□□□ -2.34
SNRNP48Q6IEG0 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.45□□□□□ -2.34
SNRNP48Q6IEG0 Y_RNA.60-201ENST00000362831 98 ntBASIC0.44□□□□□ -2.34
SNRNP48Q6IEG0 RNU4-67P-201ENST00000364569 141 ntBASIC0.44□□□□□ -2.34
SNRNP48Q6IEG0 Y_RNA.430-201ENST00000384081 110 ntBASIC0.44□□□□□ -2.34
SNRNP48Q6IEG0 SNORA50A-201ENST00000384225 134 ntBASIC0.44□□□□□ -2.34
SNRNP48Q6IEG0 Y_RNA.477-201ENST00000384352 108 ntBASIC0.44□□□□□ -2.34
SNRNP48Q6IEG0 Y_RNA.539-201ENST00000384635 107 ntBASIC0.44□□□□□ -2.34
SNRNP48Q6IEG0 RNU6-327P-201ENST00000516270 127 ntBASIC0.44□□□□□ -2.34
SNRNP48Q6IEG0 RN7SKP12-201ENST00000516275 143 ntBASIC0.44□□□□□ -2.34
SNRNP48Q6IEG0 MIR3152-201ENST00000579801 74 ntBASIC0.44□□□□□ -2.34
SNRNP48Q6IEG0 MIR4636-201ENST00000582271 80 ntBASIC0.44□□□□□ -2.34
SNRNP48Q6IEG0 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
SNRNP48Q6IEG0 RNU6-923P-201ENST00000364753 107 ntBASIC0.43□□□□□ -2.34
SNRNP48Q6IEG0 RNU4-45P-201ENST00000365469 141 ntBASIC0.43□□□□□ -2.34
SNRNP48Q6IEG0 Y_RNA.556-201ENST00000384677 113 ntBASIC0.43□□□□□ -2.34
SNRNP48Q6IEG0 SNORD100-201ENST00000408573 76 ntBASIC0.43□□□□□ -2.34
SNRNP48Q6IEG0 AC002350.1-201ENST00000490759 375 ntBASIC0.43□□□□□ -2.34
SNRNP48Q6IEG0 MTND1P19-201ENST00000511780 315 ntBASIC0.43□□□□□ -2.34
SNRNP48Q6IEG0 Y_RNA.797-201ENST00000515977 94 ntBASIC0.43□□□□□ -2.34
SNRNP48Q6IEG0 MIR6759-201ENST00000638110 65 ntBASIC0.43□□□□□ -2.34
SNRNP48Q6IEG0 RNU6-679P-201ENST00000391003 106 ntBASIC0.42□□□□□ -2.34
SNRNP48Q6IEG0 SNORD58.1-201ENST00000391313 66 ntBASIC0.42□□□□□ -2.34
SNRNP48Q6IEG0 Y_RNA.626-201ENST00000411288 95 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms