Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 MIR8065-201ENST00000620577 100 ntBASIC2.47□□□□□ -2.01
RNF43Q68DV7 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
RNF43Q68DV7 MIR21-201ENST00000362134 72 ntBASIC2.46□□□□□ -2.02
RNF43Q68DV7 Y_RNA.173-201ENST00000363776 113 ntBASIC2.46□□□□□ -2.02
RNF43Q68DV7 Y_RNA.537-201ENST00000384626 109 ntBASIC2.46□□□□□ -2.02
RNF43Q68DV7 MIR181B2-201ENST00000385004 89 ntBASIC2.46□□□□□ -2.02
RNF43Q68DV7 SCARNA16.3-201ENST00000516595 184 ntBASIC2.46□□□□□ -2.02
RNF43Q68DV7 MIR4446-201ENST00000578505 67 ntBASIC2.46□□□□□ -2.02
RNF43Q68DV7 MIR5007-201ENST00000583098 95 ntBASIC2.46□□□□□ -2.02
RNF43Q68DV7 AC012676.2-201ENST00000619258 186 ntBASIC2.46□□□□□ -2.02
RNF43Q68DV7 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
RNF43Q68DV7 SNORD115-37-201ENST00000363768 82 ntBASIC2.45□□□□□ -2.02
RNF43Q68DV7 RNA5SP138-201ENST00000365098 114 ntBASIC2.45□□□□□ -2.02
RNF43Q68DV7 MIR597-201ENST00000384968 97 ntBASIC2.45□□□□□ -2.02
RNF43Q68DV7 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
RNF43Q68DV7 snoU13.16-201ENST00000459350 104 ntBASIC2.45□□□□□ -2.02
RNF43Q68DV7 AC026436.1-201ENST00000510537 270 ntBASIC2.45□□□□□ -2.02
RNF43Q68DV7 RNU7-137P-201ENST00000516788 62 ntBASIC2.45□□□□□ -2.02
RNF43Q68DV7 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.45□□□□□ -2.02
RNF43Q68DV7 FAM106DP-201ENST00000586416 501 ntBASIC2.45□□□□□ -2.02
RNF43Q68DV7 AC046143.2-201ENST00000609789 160 ntBASIC2.45□□□□□ -2.02
RNF43Q68DV7 RNA5SP393-201ENST00000363423 117 ntBASIC2.44□□□□□ -2.02
RNF43Q68DV7 MIR29C-201ENST00000385231 88 ntBASIC2.44□□□□□ -2.02
RNF43Q68DV7 AC090255.1-201ENST00000495779 349 ntBASIC2.44□□□□□ -2.02
RNF43Q68DV7 RNU7-153P-201ENST00000516455 62 ntBASIC2.44□□□□□ -2.02
RNF43Q68DV7 MTND5P40-201ENST00000559945 246 ntBASIC2.44□□□□□ -2.02
RNF43Q68DV7 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.44□□□□□ -2.02
RNF43Q68DV7 MIR6873-201ENST00000622788 63 ntBASIC2.44□□□□□ -2.02
RNF43Q68DV7 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.43□□□□□ -2.02
RNF43Q68DV7 SNORD114-10-201ENST00000363409 72 ntBASIC2.43□□□□□ -2.02
RNF43Q68DV7 Y_RNA.338-201ENST00000365320 114 ntBASIC2.43□□□□□ -2.02
RNF43Q68DV7 RNU1-51P-201ENST00000365345 176 ntBASIC2.43□□□□□ -2.02
RNF43Q68DV7 Y_RNA.354-201ENST00000365448 111 ntBASIC2.43□□□□□ -2.02
RNF43Q68DV7 SNORD38.2-201ENST00000384470 69 ntBASIC2.43□□□□□ -2.02
RNF43Q68DV7 RNU6-1067P-201ENST00000384752 107 ntBASIC2.43□□□□□ -2.02
RNF43Q68DV7 RNU11-3P-201ENST00000391111 133 ntBASIC2.43□□□□□ -2.02
RNF43Q68DV7 RPL23AP6-201ENST00000446637 472 ntBASIC2.43□□□□□ -2.02
RNF43Q68DV7 AC021506.2-201ENST00000612354 169 ntBASIC2.43□□□□□ -2.02
RNF43Q68DV7 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.43□□□□□ -2.02
RNF43Q68DV7 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
RNF43Q68DV7 Y_RNA.98-201ENST00000363109 102 ntBASIC2.42□□□□□ -2.02
RNF43Q68DV7 Y_RNA.164-201ENST00000363709 102 ntBASIC2.42□□□□□ -2.02
RNF43Q68DV7 SNORA2B-201ENST00000384583 137 ntBASIC2.42□□□□□ -2.02
RNF43Q68DV7 RNU6-602P-201ENST00000411155 105 ntBASIC2.42□□□□□ -2.02
RNF43Q68DV7 RNU7-48P-201ENST00000458875 63 ntBASIC2.42□□□□□ -2.02
RNF43Q68DV7 RPL23AP42-201ENST00000471152 471 ntBASIC2.42□□□□□ -2.02
RNF43Q68DV7 U7.4-201ENST00000614961 63 ntBASIC2.42□□□□□ -2.02
RNF43Q68DV7 Z97988.1-201ENST00000637697 135 ntBASIC2.42□□□□□ -2.02
RNF43Q68DV7 RNU6-480P-201ENST00000384332 107 ntBASIC2.41□□□□□ -2.02
RNF43Q68DV7 MIR660-201ENST00000385235 97 ntBASIC2.41□□□□□ -2.02
RNF43Q68DV7 RNU6-447P-201ENST00000410293 104 ntBASIC2.41□□□□□ -2.02
RNF43Q68DV7 RNU6-1118P-201ENST00000410382 104 ntBASIC2.41□□□□□ -2.02
RNF43Q68DV7 RNU6-1076P-201ENST00000410397 104 ntBASIC2.41□□□□□ -2.02
RNF43Q68DV7 RNU6-355P-201ENST00000410427 104 ntBASIC2.41□□□□□ -2.02
RNF43Q68DV7 RNU6-791P-201ENST00000410467 104 ntBASIC2.41□□□□□ -2.02
RNF43Q68DV7 RNU6-705P-201ENST00000410601 104 ntBASIC2.41□□□□□ -2.02
RNF43Q68DV7 RNU6-1100P-201ENST00000410691 104 ntBASIC2.41□□□□□ -2.02
RNF43Q68DV7 RNU6-860P-201ENST00000410860 104 ntBASIC2.41□□□□□ -2.02
RNF43Q68DV7 RNU6-1217P-201ENST00000411276 104 ntBASIC2.41□□□□□ -2.02
RNF43Q68DV7 RNU6-785P-201ENST00000411324 104 ntBASIC2.41□□□□□ -2.02
RNF43Q68DV7 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.41□□□□□ -2.02
RNF43Q68DV7 RNVU1-2-201ENST00000516326 135 ntBASIC2.41□□□□□ -2.02
RNF43Q68DV7 U6.90-201ENST00000614007 104 ntBASIC2.41□□□□□ -2.02
RNF43Q68DV7 U6.70-201ENST00000620287 104 ntBASIC2.41□□□□□ -2.02
RNF43Q68DV7 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.41□□□□□ -2.02
RNF43Q68DV7 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
RNF43Q68DV7 RNU6-315P-201ENST00000362666 107 ntBASIC2.4□□□□□ -2.03
RNF43Q68DV7 Y_RNA.168-201ENST00000363740 102 ntBASIC2.4□□□□□ -2.03
RNF43Q68DV7 RNU6-1237P-201ENST00000384777 107 ntBASIC2.4□□□□□ -2.03
RNF43Q68DV7 MIR144-201ENST00000384886 86 ntBASIC2.4□□□□□ -2.03
RNF43Q68DV7 RNU6-519P-201ENST00000410590 108 ntBASIC2.4□□□□□ -2.03
RNF43Q68DV7 RNU2-7P-201ENST00000410794 178 ntBASIC2.4□□□□□ -2.03
RNF43Q68DV7 AC087499.7-201ENST00000441958 109 ntBASIC2.4□□□□□ -2.03
RNF43Q68DV7 HMGN2P23-201ENST00000456759 269 ntBASIC2.4□□□□□ -2.03
RNF43Q68DV7 SNORA74.3-201ENST00000517108 154 ntBASIC2.4□□□□□ -2.03
RNF43Q68DV7 RNA5SP437-201ENST00000517249 129 ntBASIC2.4□□□□□ -2.03
RNF43Q68DV7 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.4□□□□□ -2.03
RNF43Q68DV7 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.4□□□□□ -2.03
RNF43Q68DV7 AL513423.1-201ENST00000621695 132 ntBASIC2.4□□□□□ -2.03
RNF43Q68DV7 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.39□□□□□ -2.03
RNF43Q68DV7 MIRLET7G-201ENST00000362280 84 ntBASIC2.39□□□□□ -2.03
RNF43Q68DV7 RNU6-478P-201ENST00000363904 110 ntBASIC2.39□□□□□ -2.03
RNF43Q68DV7 SNORA38-201ENST00000363946 132 ntBASIC2.39□□□□□ -2.03
RNF43Q68DV7 Y_RNA.545-201ENST00000384652 105 ntBASIC2.39□□□□□ -2.03
RNF43Q68DV7 RNU6-129P-201ENST00000391022 107 ntBASIC2.39□□□□□ -2.03
RNF43Q68DV7 AC104435.1-201ENST00000483483 166 ntBASIC2.39□□□□□ -2.03
RNF43Q68DV7 SNORA25.13-201ENST00000516395 103 ntBASIC2.39□□□□□ -2.03
RNF43Q68DV7 RNA5SP82-201ENST00000516707 92 ntBASIC2.39□□□□□ -2.03
RNF43Q68DV7 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.39□□□□□ -2.03
RNF43Q68DV7 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
RNF43Q68DV7 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.39□□□□□ -2.03
RNF43Q68DV7 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
RNF43Q68DV7 MIR520A-201ENST00000384862 85 ntBASIC2.38□□□□□ -2.03
RNF43Q68DV7 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
RNF43Q68DV7 AC099513.1-201ENST00000490423 301 ntBASIC2.38□□□□□ -2.03
RNF43Q68DV7 MIR4709-201ENST00000577272 72 ntBASIC2.38□□□□□ -2.03
RNF43Q68DV7 MIR3126-201ENST00000577443 74 ntBASIC2.38□□□□□ -2.03
RNF43Q68DV7 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.38□□□□□ -2.03
RNF43Q68DV7 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.38□□□□□ -2.03
RNF43Q68DV7 AP001362.1-201ENST00000625165 124 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 195.5 ms