Protein–RNA interactions for Protein: Q5TB30

DEPDC1, DEP domain-containing protein 1A, humanhuman

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1Q5TB30 AC244023.1-201ENST00000426884 112 ntBASIC1.38□□□□□ -2.19
DEPDC1Q5TB30 AC004812.1-201ENST00000540773 146 ntBASIC1.38□□□□□ -2.19
DEPDC1Q5TB30 AC242498.1-201ENST00000604134 111 ntBASIC1.38□□□□□ -2.19
DEPDC1Q5TB30 SNORD38B-202ENST00000625943 69 ntBASIC1.38□□□□□ -2.19
DEPDC1Q5TB30 MIR6516-201ENST00000630554 81 ntBASIC1.38□□□□□ -2.19
DEPDC1Q5TB30 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
DEPDC1Q5TB30 Y_RNA.291-201ENST00000364886 113 ntBASIC1.37□□□□□ -2.19
DEPDC1Q5TB30 RNU6-396P-201ENST00000365369 105 ntBASIC1.37□□□□□ -2.19
DEPDC1Q5TB30 Y_RNA.354-201ENST00000365448 111 ntBASIC1.37□□□□□ -2.19
DEPDC1Q5TB30 RNU6-613P-201ENST00000410412 108 ntBASIC1.37□□□□□ -2.19
DEPDC1Q5TB30 AC113410.1-201ENST00000505029 247 ntBASIC1.37□□□□□ -2.19
DEPDC1Q5TB30 MIR2115-201ENST00000516657 100 ntBASIC1.37□□□□□ -2.19
DEPDC1Q5TB30 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.37□□□□□ -2.19
DEPDC1Q5TB30 AC019288.1-201ENST00000557918 224 ntBASIC1.37□□□□□ -2.19
DEPDC1Q5TB30 MIR4303-201ENST00000581299 66 ntBASIC1.37□□□□□ -2.19
DEPDC1Q5TB30 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.37□□□□□ -2.19
DEPDC1Q5TB30 U6.95-201ENST00000636931 70 ntBASIC1.37□□□□□ -2.19
DEPDC1Q5TB30 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
DEPDC1Q5TB30 MTND5P18-201ENST00000445624 1801 ntBASIC1.36□□□□□ -2.19
DEPDC1Q5TB30 MIR378A-201ENST00000362177 66 ntBASIC1.36□□□□□ -2.19
DEPDC1Q5TB30 RNA5SP327-201ENST00000362494 101 ntBASIC1.36□□□□□ -2.19
DEPDC1Q5TB30 Y_RNA.346-201ENST00000365385 112 ntBASIC1.36□□□□□ -2.19
DEPDC1Q5TB30 Y_RNA.353-201ENST00000365440 108 ntBASIC1.36□□□□□ -2.19
DEPDC1Q5TB30 Y_RNA.528-201ENST00000384575 108 ntBASIC1.36□□□□□ -2.19
DEPDC1Q5TB30 Y_RNA.531-201ENST00000384589 121 ntBASIC1.36□□□□□ -2.19
DEPDC1Q5TB30 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.36□□□□□ -2.19
DEPDC1Q5TB30 MIR4264-201ENST00000583520 66 ntBASIC1.36□□□□□ -2.19
DEPDC1Q5TB30 AL512598.1-201ENST00000610158 273 ntBASIC1.36□□□□□ -2.19
DEPDC1Q5TB30 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
DEPDC1Q5TB30 MIR377-201ENST00000362145 69 ntBASIC1.35□□□□□ -2.19
DEPDC1Q5TB30 Y_RNA.198-201ENST00000364013 98 ntBASIC1.35□□□□□ -2.19
DEPDC1Q5TB30 Y_RNA.470-201ENST00000384307 117 ntBASIC1.35□□□□□ -2.19
DEPDC1Q5TB30 RNU6-1104P-201ENST00000384723 104 ntBASIC1.35□□□□□ -2.19
DEPDC1Q5TB30 RNU7-113P-201ENST00000459273 62 ntBASIC1.35□□□□□ -2.19
DEPDC1Q5TB30 RPS23P4-201ENST00000487908 423 ntBASIC1.35□□□□□ -2.19
DEPDC1Q5TB30 AC022523.2-201ENST00000561045 150 ntBASIC1.35□□□□□ -2.19
DEPDC1Q5TB30 SEPT14P17-201ENST00000617978 177 ntBASIC1.35□□□□□ -2.19
DEPDC1Q5TB30 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.35□□□□□ -2.19
DEPDC1Q5TB30 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.19
DEPDC1Q5TB30 SNORA25.8-201ENST00000364831 128 ntBASIC1.34□□□□□ -2.19
DEPDC1Q5TB30 MT-TI-201ENST00000387365 69 ntBASIC1.34□□□□□ -2.19
DEPDC1Q5TB30 SNORA75.2-201ENST00000391138 150 ntBASIC1.34□□□□□ -2.19
DEPDC1Q5TB30 SNORA75.3-201ENST00000391231 150 ntBASIC1.34□□□□□ -2.19
DEPDC1Q5TB30 RNU4-62P-201ENST00000410125 130 ntBASIC1.34□□□□□ -2.19
DEPDC1Q5TB30 SNORD33.1-201ENST00000516213 88 ntBASIC1.34□□□□□ -2.19
DEPDC1Q5TB30 RNU1-92P-201ENST00000517017 135 ntBASIC1.34□□□□□ -2.19
DEPDC1Q5TB30 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.34□□□□□ -2.2
DEPDC1Q5TB30 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.34□□□□□ -2.2
DEPDC1Q5TB30 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
DEPDC1Q5TB30 RNU6-654P-201ENST00000364373 107 ntBASIC1.33□□□□□ -2.2
DEPDC1Q5TB30 RNU6-580P-201ENST00000365159 107 ntBASIC1.33□□□□□ -2.2
DEPDC1Q5TB30 SNORD12C-201ENST00000386307 89 ntBASIC1.33□□□□□ -2.2
DEPDC1Q5TB30 BTF3P4-201ENST00000418852 495 ntBASIC1.33□□□□□ -2.2
DEPDC1Q5TB30 SNORD79.1-201ENST00000516069 84 ntBASIC1.33□□□□□ -2.2
DEPDC1Q5TB30 RNA5SP61-201ENST00000516453 100 ntBASIC1.33□□□□□ -2.2
DEPDC1Q5TB30 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.33□□□□□ -2.2
DEPDC1Q5TB30 RNU6-834P-201ENST00000362367 110 ntBASIC1.32□□□□□ -2.2
DEPDC1Q5TB30 Y_RNA.213-201ENST00000364178 111 ntBASIC1.32□□□□□ -2.2
DEPDC1Q5TB30 MIR563-201ENST00000385080 79 ntBASIC1.32□□□□□ -2.2
DEPDC1Q5TB30 AL603825.1-201ENST00000438481 80 ntBASIC1.32□□□□□ -2.2
DEPDC1Q5TB30 snoU13.2-201ENST00000459201 104 ntBASIC1.32□□□□□ -2.2
DEPDC1Q5TB30 AP000753.3-201ENST00000604083 169 ntBASIC1.32□□□□□ -2.2
DEPDC1Q5TB30 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.32□□□□□ -2.2
DEPDC1Q5TB30 ZNF209P-201ENST00000593450 2304 ntBASIC1.32□□□□□ -2.2
DEPDC1Q5TB30 Y_RNA.299-201ENST00000364973 94 ntBASIC1.31□□□□□ -2.2
DEPDC1Q5TB30 RNU6-910P-201ENST00000390844 107 ntBASIC1.31□□□□□ -2.2
DEPDC1Q5TB30 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.31□□□□□ -2.2
DEPDC1Q5TB30 MIR1270-201ENST00000459320 83 ntBASIC1.31□□□□□ -2.2
DEPDC1Q5TB30 RNU7-21P-201ENST00000459430 62 ntBASIC1.31□□□□□ -2.2
DEPDC1Q5TB30 RNA5SP33-201ENST00000516687 98 ntBASIC1.31□□□□□ -2.2
DEPDC1Q5TB30 MIR548AI-201ENST00000579940 88 ntBASIC1.31□□□□□ -2.2
DEPDC1Q5TB30 MIR548AE2-201ENST00000583456 67 ntBASIC1.31□□□□□ -2.2
DEPDC1Q5TB30 AL359881.1-201ENST00000602916 267 ntBASIC1.31□□□□□ -2.2
DEPDC1Q5TB30 Y_RNA.168-201ENST00000363740 102 ntBASIC1.3□□□□□ -2.2
DEPDC1Q5TB30 SNORA80D-201ENST00000384488 135 ntBASIC1.3□□□□□ -2.2
DEPDC1Q5TB30 RNU6-342P-201ENST00000384521 104 ntBASIC1.3□□□□□ -2.2
DEPDC1Q5TB30 RNU6-735P-201ENST00000410612 107 ntBASIC1.3□□□□□ -2.2
DEPDC1Q5TB30 RNU4-69P-201ENST00000410677 143 ntBASIC1.3□□□□□ -2.2
DEPDC1Q5TB30 AL591704.2-201ENST00000421658 181 ntBASIC1.3□□□□□ -2.2
DEPDC1Q5TB30 AL670379.3-201ENST00000605040 251 ntBASIC1.3□□□□□ -2.2
DEPDC1Q5TB30 MIR6740-201ENST00000618268 113 ntBASIC1.3□□□□□ -2.2
DEPDC1Q5TB30 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
DEPDC1Q5TB30 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
DEPDC1Q5TB30 Y_RNA.273-201ENST00000364703 102 ntBASIC1.29□□□□□ -2.2
DEPDC1Q5TB30 Y_RNA.338-201ENST00000365320 114 ntBASIC1.29□□□□□ -2.2
DEPDC1Q5TB30 SNORA18-201ENST00000384416 132 ntBASIC1.29□□□□□ -2.2
DEPDC1Q5TB30 MIR758-201ENST00000390227 88 ntBASIC1.29□□□□□ -2.2
DEPDC1Q5TB30 RNU6-205P-201ENST00000390858 107 ntBASIC1.29□□□□□ -2.2
DEPDC1Q5TB30 SNORD12-201ENST00000391002 90 ntBASIC1.29□□□□□ -2.2
DEPDC1Q5TB30 RNA5SP95-201ENST00000410319 137 ntBASIC1.29□□□□□ -2.2
DEPDC1Q5TB30 AP1B1P2-201ENST00000416196 106 ntBASIC1.29□□□□□ -2.2
DEPDC1Q5TB30 RNU7-95P-201ENST00000459222 64 ntBASIC1.29□□□□□ -2.2
DEPDC1Q5TB30 AC108729.3-201ENST00000513484 108 ntBASIC1.29□□□□□ -2.2
DEPDC1Q5TB30 RNU7-40P-201ENST00000516397 64 ntBASIC1.29□□□□□ -2.2
DEPDC1Q5TB30 RNU7-35P-201ENST00000517174 62 ntBASIC1.29□□□□□ -2.2
DEPDC1Q5TB30 MIR3163-201ENST00000581592 73 ntBASIC1.29□□□□□ -2.2
DEPDC1Q5TB30 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
DEPDC1Q5TB30 SNORA25-201ENST00000384384 134 ntBASIC1.28□□□□□ -2.2
DEPDC1Q5TB30 MIR588-201ENST00000384900 83 ntBASIC1.28□□□□□ -2.2
DEPDC1Q5TB30 MIR222-201ENST00000384992 110 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 241.2 ms