Protein–RNA interactions for Protein: Q02388

COL7A1, Collagen alpha-1(VII) chain, humanhuman

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1Q02388 HSPE1P25-201ENST00000455484 251 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 SNORD11-201ENST00000459124 84 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 SNORD2-201ENST00000459163 69 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 RNU6-998P-201ENST00000515894 101 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 RNU6-470P-201ENST00000515954 104 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 Y_RNA.682-201ENST00000516457 100 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 Y_RNA.695-201ENST00000516715 107 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-0.27□□□□□ -2.45
COL7A1Q02388 AC055872.1-201ENST00000570978 278 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 MIR4724-201ENST00000579485 89 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 MIR3129-201ENST00000581095 76 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 MIR4273-201ENST00000582824 84 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 AC060780.3-201ENST00000589464 80 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 AC090617.8-201ENST00000623339 167 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 AC099654.14-201ENST00000638599 341 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 Y_RNA.3-201ENST00000362331 103 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 RNU6-1287P-201ENST00000362914 107 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 RNU4-50P-201ENST00000364361 141 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 SNORD115-20-201ENST00000365099 82 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 RNU6-596P-201ENST00000365395 98 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 RNU6-154P-201ENST00000384306 106 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 RNU6-1060P-201ENST00000384664 107 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 SNORA40.4-201ENST00000390971 128 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-0.27□□□□□ -2.45
COL7A1Q02388 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.27□□□□□ -2.45
COL7A1Q02388 MTND1P27-201ENST00000451117 902 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 MTND2P39-201ENST00000457230 764 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 RNU7-188P-201ENST00000517063 64 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 RNU7-35P-201ENST00000517174 62 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 MIR2355-201ENST00000517199 87 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 MTATP6P24-201ENST00000576835 677 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 MIR4423-201ENST00000580922 80 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 YWHAEP3-201ENST00000582767 121 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 AC018645.2-201ENST00000609151 472 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 MIR6773-201ENST00000612812 74 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 DLEU2_5.1-201ENST00000615567 84 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 RNU6-874P-201ENST00000362390 105 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 Y_RNA.162-201ENST00000363683 102 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 RNY1P2-201ENST00000364820 117 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 RNU6-1138P-201ENST00000365359 106 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 RNU6-456P-201ENST00000384493 107 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 RNU6-831P-201ENST00000384548 107 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 RNU6-636P-201ENST00000384598 107 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 Y_RNA.560-201ENST00000384689 102 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 RNY3P10-201ENST00000384764 102 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 RNU6-763P-201ENST00000390865 106 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 RNU6-1009P-201ENST00000390996 107 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 RNU6-780P-201ENST00000391030 104 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 MIR548K-201ENST00000408406 116 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 RNU6-373P-201ENST00000411247 98 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 RNU7-125P-201ENST00000458760 62 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 RNU7-45P-201ENST00000459460 63 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 SNORD123-201ENST00000459473 70 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 Y_RNA.655-201ENST00000515919 96 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 SNORD63.1-201ENST00000516178 80 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-0.27□□□□□ -2.45
COL7A1Q02388 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.27□□□□□ -2.45
COL7A1Q02388 AC140658.3-201ENST00000567603 271 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 MIR3682-201ENST00000581338 84 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 AC006504.6-201ENST00000590142 199 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 AC124312.5-201ENST00000604451 268 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 AC133104.2-201ENST00000615272 193 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 AP001506.1-201ENST00000615444 211 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 AC024614.3-201ENST00000637860 256 ntBASIC-0.27□□□□□ -2.45
COL7A1Q02388 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.28□□□□□ -2.45
COL7A1Q02388 SNORD36A-201ENST00000362874 73 ntBASIC-0.28□□□□□ -2.45
COL7A1Q02388 Y_RNA.77-201ENST00000362962 107 ntBASIC-0.28□□□□□ -2.45
COL7A1Q02388 RNU6-1120P-201ENST00000362988 108 ntBASIC-0.28□□□□□ -2.45
COL7A1Q02388 Y_RNA.127-201ENST00000363386 109 ntBASIC-0.28□□□□□ -2.45
COL7A1Q02388 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.28□□□□□ -2.45
COL7A1Q02388 RNU6-913P-201ENST00000390913 95 ntBASIC-0.28□□□□□ -2.45
COL7A1Q02388 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.28□□□□□ -2.45
COL7A1Q02388 Y_RNA.615-201ENST00000410769 117 ntBASIC-0.28□□□□□ -2.45
COL7A1Q02388 MTCYBP8-201ENST00000422855 651 ntBASIC-0.28□□□□□ -2.45
COL7A1Q02388 MTND2P22-201ENST00000444325 1033 ntBASIC-0.28□□□□□ -2.45
COL7A1Q02388 RNA5SP484-201ENST00000458857 111 ntBASIC-0.28□□□□□ -2.45
COL7A1Q02388 MTND3P7-201ENST00000474435 343 ntBASIC-0.28□□□□□ -2.45
COL7A1Q02388 RNU6-75P-201ENST00000515944 104 ntBASIC-0.28□□□□□ -2.45
COL7A1Q02388 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-0.28□□□□□ -2.45
COL7A1Q02388 MRPS36P3-201ENST00000519284 130 ntBASIC-0.28□□□□□ -2.45
COL7A1Q02388 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-0.28□□□□□ -2.45
COL7A1Q02388 MTND3P12-201ENST00000559068 328 ntBASIC-0.28□□□□□ -2.45
COL7A1Q02388 MIR4500-201ENST00000579472 76 ntBASIC-0.28□□□□□ -2.45
COL7A1Q02388 MIR4308-201ENST00000580634 81 ntBASIC-0.28□□□□□ -2.45
COL7A1Q02388 MIR5197-201ENST00000583721 112 ntBASIC-0.28□□□□□ -2.45
COL7A1Q02388 AL008718.3-201ENST00000610217 321 ntBASIC-0.28□□□□□ -2.45
COL7A1Q02388 AL354950.2-201ENST00000617939 290 ntBASIC-0.28□□□□□ -2.45
COL7A1Q02388 AL669831.3-213ENST00000636676 183 ntBASIC-0.28□□□□□ -2.45
COL7A1Q02388 RNU6-801P-201ENST00000364087 105 ntBASIC-0.28□□□□□ -2.45
COL7A1Q02388 Y_RNA.284-201ENST00000364806 102 ntBASIC-0.28□□□□□ -2.45
COL7A1Q02388 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.28□□□□□ -2.45
COL7A1Q02388 RNU6-708P-201ENST00000384217 107 ntBASIC-0.28□□□□□ -2.45
COL7A1Q02388 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.28□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 252.4 ms