Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 MIR18B-201ENST00000454574 71 ntBASIC0.73□□□□□ -2.29
CDK3Q00526 Y_RNA.644-201ENST00000459006 113 ntBASIC0.73□□□□□ -2.29
CDK3Q00526 snoU13.18-201ENST00000459483 104 ntBASIC0.73□□□□□ -2.29
CDK3Q00526 Y_RNA.674-201ENST00000516362 113 ntBASIC0.73□□□□□ -2.29
CDK3Q00526 RNU6-388P-201ENST00000517012 105 ntBASIC0.73□□□□□ -2.29
CDK3Q00526 RNU6-389P-201ENST00000517048 105 ntBASIC0.73□□□□□ -2.29
CDK3Q00526 AC011195.1-201ENST00000578177 177 ntBASIC0.73□□□□□ -2.29
CDK3Q00526 MIR4676-201ENST00000583078 72 ntBASIC0.73□□□□□ -2.29
CDK3Q00526 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
CDK3Q00526 Y_RNA.393-201ENST00000383936 102 ntBASIC0.72□□□□□ -2.29
CDK3Q00526 Y_RNA.552-201ENST00000384665 112 ntBASIC0.72□□□□□ -2.29
CDK3Q00526 MIR146A-201ENST00000385201 99 ntBASIC0.72□□□□□ -2.29
CDK3Q00526 MT-TG-201ENST00000387429 68 ntBASIC0.72□□□□□ -2.29
CDK3Q00526 AC107027.2-201ENST00000512197 115 ntBASIC0.72□□□□□ -2.29
CDK3Q00526 AC020891.4-201ENST00000605745 93 ntBASIC0.72□□□□□ -2.29
CDK3Q00526 AC022709.1-201ENST00000615967 87 ntBASIC0.72□□□□□ -2.29
CDK3Q00526 MIR6835-201ENST00000621552 64 ntBASIC0.72□□□□□ -2.29
CDK3Q00526 AC021613.1-201ENST00000623880 111 ntBASIC0.72□□□□□ -2.29
CDK3Q00526 MTND5P32-201ENST00000560711 1802 ntBASIC0.71□□□□□ -2.3
CDK3Q00526 Y_RNA.430-201ENST00000384081 110 ntBASIC0.71□□□□□ -2.3
CDK3Q00526 RNU6-768P-201ENST00000384683 107 ntBASIC0.71□□□□□ -2.3
CDK3Q00526 MIR520H-201ENST00000385126 88 ntBASIC0.71□□□□□ -2.3
CDK3Q00526 RNU1-119P-201ENST00000391122 165 ntBASIC0.71□□□□□ -2.3
CDK3Q00526 Y_RNA.793-201ENST00000411222 111 ntBASIC0.71□□□□□ -2.3
CDK3Q00526 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.71□□□□□ -2.3
CDK3Q00526 MIR5000-201ENST00000577717 103 ntBASIC0.71□□□□□ -2.3
CDK3Q00526 MIR4714-201ENST00000580728 77 ntBASIC0.71□□□□□ -2.3
CDK3Q00526 MIR4804-201ENST00000581683 73 ntBASIC0.71□□□□□ -2.3
CDK3Q00526 RNU4-16P-201ENST00000364737 141 ntBASIC0.7□□□□□ -2.3
CDK3Q00526 RNU6-1237P-201ENST00000384777 107 ntBASIC0.7□□□□□ -2.3
CDK3Q00526 MIR563-201ENST00000385080 79 ntBASIC0.7□□□□□ -2.3
CDK3Q00526 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.7□□□□□ -2.3
CDK3Q00526 AC244098.3-201ENST00000424803 96 ntBASIC0.7□□□□□ -2.3
CDK3Q00526 AP002392.1-201ENST00000537692 208 ntBASIC0.7□□□□□ -2.3
CDK3Q00526 AC072026.1-201ENST00000605023 201 ntBASIC0.7□□□□□ -2.3
CDK3Q00526 SNORA22.1-201ENST00000362701 134 ntBASIC0.69□□□□□ -2.3
CDK3Q00526 Y_RNA.118-201ENST00000363300 101 ntBASIC0.69□□□□□ -2.3
CDK3Q00526 Y_RNA.337-201ENST00000365312 102 ntBASIC0.69□□□□□ -2.3
CDK3Q00526 RNU6-110P-201ENST00000384508 104 ntBASIC0.69□□□□□ -2.3
CDK3Q00526 MIR508-201ENST00000384857 115 ntBASIC0.69□□□□□ -2.3
CDK3Q00526 MT-TF-201ENST00000387314 71 ntBASIC0.69□□□□□ -2.3
CDK3Q00526 MIR1257-201ENST00000408490 117 ntBASIC0.69□□□□□ -2.3
CDK3Q00526 RNA5SP237-201ENST00000410414 113 ntBASIC0.69□□□□□ -2.3
CDK3Q00526 RNU7-185P-201ENST00000459215 60 ntBASIC0.69□□□□□ -2.3
CDK3Q00526 AC133485.1-201ENST00000567176 124 ntBASIC0.69□□□□□ -2.3
CDK3Q00526 AC138907.6-201ENST00000568401 126 ntBASIC0.69□□□□□ -2.3
CDK3Q00526 MIR4653-201ENST00000585107 83 ntBASIC0.69□□□□□ -2.3
CDK3Q00526 MIR30D-201ENST00000362283 70 ntBASIC0.68□□□□□ -2.3
CDK3Q00526 Y_RNA.52-201ENST00000362760 96 ntBASIC0.68□□□□□ -2.3
CDK3Q00526 RNU6-200P-201ENST00000364743 107 ntBASIC0.68□□□□□ -2.3
CDK3Q00526 Y_RNA.357-201ENST00000365487 109 ntBASIC0.68□□□□□ -2.3
CDK3Q00526 MIR938-201ENST00000401216 83 ntBASIC0.68□□□□□ -2.3
CDK3Q00526 RNA5SP222-201ENST00000411039 105 ntBASIC0.68□□□□□ -2.3
CDK3Q00526 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.68□□□□□ -2.3
CDK3Q00526 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.67□□□□□ -2.3
CDK3Q00526 RNU6-1082P-201ENST00000364574 107 ntBASIC0.67□□□□□ -2.3
CDK3Q00526 MIR125B2-201ENST00000385128 89 ntBASIC0.67□□□□□ -2.3
CDK3Q00526 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.67□□□□□ -2.3
CDK3Q00526 RNU6-138P-201ENST00000515952 107 ntBASIC0.67□□□□□ -2.3
CDK3Q00526 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.67□□□□□ -2.3
CDK3Q00526 AL590095.2-201ENST00000604136 117 ntBASIC0.67□□□□□ -2.3
CDK3Q00526 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.67□□□□□ -2.3
CDK3Q00526 MIR6841-201ENST00000637129 72 ntBASIC0.67□□□□□ -2.3
CDK3Q00526 RNU6-818P-201ENST00000364837 108 ntBASIC0.66□□□□□ -2.3
CDK3Q00526 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
CDK3Q00526 RNY1P6-201ENST00000384193 109 ntBASIC0.66□□□□□ -2.3
CDK3Q00526 RNU6-364P-201ENST00000384387 107 ntBASIC0.66□□□□□ -2.3
CDK3Q00526 MIR573-201ENST00000384964 99 ntBASIC0.66□□□□□ -2.3
CDK3Q00526 AL606490.4-201ENST00000423117 127 ntBASIC0.66□□□□□ -2.3
CDK3Q00526 RPL39P25-201ENST00000449384 154 ntBASIC0.66□□□□□ -2.3
CDK3Q00526 RNU7-56P-201ENST00000458744 62 ntBASIC0.66□□□□□ -2.3
CDK3Q00526 COX6CP6-201ENST00000490840 228 ntBASIC0.66□□□□□ -2.3
CDK3Q00526 AL662814.1-201ENST00000617364 121 ntBASIC0.66□□□□□ -2.3
CDK3Q00526 MIR6844-201ENST00000637122 62 ntBASIC0.66□□□□□ -2.3
CDK3Q00526 RNU6-239P-201ENST00000390990 99 ntBASIC0.65□□□□□ -2.31
CDK3Q00526 SNORA75.5-201ENST00000391291 81 ntBASIC0.65□□□□□ -2.31
CDK3Q00526 RNU6-893P-201ENST00000458841 100 ntBASIC0.65□□□□□ -2.31
CDK3Q00526 AC004812.1-201ENST00000540773 146 ntBASIC0.65□□□□□ -2.31
CDK3Q00526 SNORA36.2-201ENST00000384004 127 ntBASIC0.64□□□□□ -2.31
CDK3Q00526 MIR489-201ENST00000384923 84 ntBASIC0.64□□□□□ -2.31
CDK3Q00526 RNU6-447P-201ENST00000410293 104 ntBASIC0.64□□□□□ -2.31
CDK3Q00526 RNU6-1118P-201ENST00000410382 104 ntBASIC0.64□□□□□ -2.31
CDK3Q00526 RNU6-1076P-201ENST00000410397 104 ntBASIC0.64□□□□□ -2.31
CDK3Q00526 RNU6-355P-201ENST00000410427 104 ntBASIC0.64□□□□□ -2.31
CDK3Q00526 RNU6-791P-201ENST00000410467 104 ntBASIC0.64□□□□□ -2.31
CDK3Q00526 RNU6-705P-201ENST00000410601 104 ntBASIC0.64□□□□□ -2.31
CDK3Q00526 RNU6-1100P-201ENST00000410691 104 ntBASIC0.64□□□□□ -2.31
CDK3Q00526 RNU6-860P-201ENST00000410860 104 ntBASIC0.64□□□□□ -2.31
CDK3Q00526 RNU6-1217P-201ENST00000411276 104 ntBASIC0.64□□□□□ -2.31
CDK3Q00526 RNU6-785P-201ENST00000411324 104 ntBASIC0.64□□□□□ -2.31
CDK3Q00526 MTND5P15-201ENST00000434246 349 ntBASIC0.64□□□□□ -2.31
CDK3Q00526 RNU6-861P-201ENST00000516745 106 ntBASIC0.64□□□□□ -2.31
CDK3Q00526 RNU7-156P-201ENST00000517214 74 ntBASIC0.64□□□□□ -2.31
CDK3Q00526 U6.90-201ENST00000614007 104 ntBASIC0.64□□□□□ -2.31
CDK3Q00526 U6.70-201ENST00000620287 104 ntBASIC0.64□□□□□ -2.31
CDK3Q00526 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
CDK3Q00526 RNU4-84P-201ENST00000364200 139 ntBASIC0.63□□□□□ -2.31
CDK3Q00526 Y_RNA.257-201ENST00000364596 102 ntBASIC0.63□□□□□ -2.31
CDK3Q00526 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.63□□□□□ -2.31
CDK3Q00526 SNORD93-201ENST00000408813 74 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms