Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 MIR1302-1-201ENST00000637932 143 ntBASIC-0.36□□□□□ -2.47
HOXC5Q00444 MIR655-201ENST00000362159 97 ntBASIC-0.37□□□□□ -2.47
HOXC5Q00444 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.37□□□□□ -2.47
HOXC5Q00444 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.37□□□□□ -2.47
HOXC5Q00444 RNU6-290P-201ENST00000365212 101 ntBASIC-0.37□□□□□ -2.47
HOXC5Q00444 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.37□□□□□ -2.47
HOXC5Q00444 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.37□□□□□ -2.47
HOXC5Q00444 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.37□□□□□ -2.47
HOXC5Q00444 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.37□□□□□ -2.47
HOXC5Q00444 MIR626-201ENST00000385032 94 ntBASIC-0.37□□□□□ -2.47
HOXC5Q00444 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.37□□□□□ -2.47
HOXC5Q00444 AC244250.2-201ENST00000418731 148 ntBASIC-0.37□□□□□ -2.47
HOXC5Q00444 RNU7-35P-201ENST00000517174 62 ntBASIC-0.37□□□□□ -2.47
HOXC5Q00444 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.37□□□□□ -2.47
HOXC5Q00444 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-0.37□□□□□ -2.47
HOXC5Q00444 AC006006.1-201ENST00000603082 144 ntBASIC-0.37□□□□□ -2.47
HOXC5Q00444 AC073869.9-201ENST00000641610 120 ntBASIC-0.37□□□□□ -2.47
HOXC5Q00444 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.38□□□□□ -2.47
HOXC5Q00444 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.38□□□□□ -2.47
HOXC5Q00444 RNY1P2-201ENST00000364820 117 ntBASIC-0.38□□□□□ -2.47
HOXC5Q00444 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.38□□□□□ -2.47
HOXC5Q00444 SNORA8.3-201ENST00000384679 139 ntBASIC-0.38□□□□□ -2.47
HOXC5Q00444 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.38□□□□□ -2.47
HOXC5Q00444 AL731563.1-201ENST00000442202 214 ntBASIC-0.38□□□□□ -2.47
HOXC5Q00444 RNU7-79P-201ENST00000516082 62 ntBASIC-0.38□□□□□ -2.47
HOXC5Q00444 DEFB131E-201ENST00000532329 154 ntBASIC-0.38□□□□□ -2.47
HOXC5Q00444 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.38□□□□□ -2.47
HOXC5Q00444 AL365205.2-201ENST00000594586 68 ntBASIC-0.38□□□□□ -2.47
HOXC5Q00444 AL132765.2-201ENST00000610812 351 ntBASIC-0.38□□□□□ -2.47
HOXC5Q00444 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.38□□□□□ -2.47
HOXC5Q00444 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.38□□□□□ -2.47
HOXC5Q00444 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.39□□□□□ -2.47
HOXC5Q00444 RNU4-73P-201ENST00000363164 141 ntBASIC-0.39□□□□□ -2.47
HOXC5Q00444 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.39□□□□□ -2.47
HOXC5Q00444 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.39□□□□□ -2.47
HOXC5Q00444 RNA5SP275-201ENST00000363936 118 ntBASIC-0.39□□□□□ -2.47
HOXC5Q00444 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.39□□□□□ -2.47
HOXC5Q00444 RNU4-16P-201ENST00000364737 141 ntBASIC-0.39□□□□□ -2.47
HOXC5Q00444 SNORD14C-201ENST00000365382 88 ntBASIC-0.39□□□□□ -2.47
HOXC5Q00444 RNU6-811P-201ENST00000384069 107 ntBASIC-0.39□□□□□ -2.47
HOXC5Q00444 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.39□□□□□ -2.47
HOXC5Q00444 MIR1302-11-201ENST00000408051 138 ntBASIC-0.39□□□□□ -2.47
HOXC5Q00444 MIR1302-9-201ENST00000408365 138 ntBASIC-0.39□□□□□ -2.47
HOXC5Q00444 MIR1302-10-201ENST00000408734 138 ntBASIC-0.39□□□□□ -2.47
HOXC5Q00444 BX276092.1-201ENST00000427368 251 ntBASIC-0.39□□□□□ -2.47
HOXC5Q00444 RNA5SP484-201ENST00000458857 111 ntBASIC-0.39□□□□□ -2.47
HOXC5Q00444 Y_RNA.632-201ENST00000459189 102 ntBASIC-0.39□□□□□ -2.47
HOXC5Q00444 SNORD19B-201ENST00000459623 84 ntBASIC-0.39□□□□□ -2.47
HOXC5Q00444 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.39□□□□□ -2.47
HOXC5Q00444 SCARNA15-202ENST00000516881 127 ntBASIC-0.39□□□□□ -2.47
HOXC5Q00444 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-0.39□□□□□ -2.47
HOXC5Q00444 MIR1302-2-201ENST00000607096 138 ntBASIC-0.39□□□□□ -2.47
HOXC5Q00444 AC093783.1-201ENST00000612976 329 ntBASIC-0.39□□□□□ -2.47
HOXC5Q00444 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.39□□□□□ -2.47
HOXC5Q00444 AC112487.2-201ENST00000637950 304 ntBASIC-0.39□□□□□ -2.47
HOXC5Q00444 UBE2WP1-201ENST00000362030 340 ntBASIC-0.4□□□□□ -2.47
HOXC5Q00444 MIR101-2-201ENST00000362195 79 ntBASIC-0.4□□□□□ -2.47
HOXC5Q00444 SNORA25.1-201ENST00000362326 128 ntBASIC-0.4□□□□□ -2.47
HOXC5Q00444 Y_RNA.315-201ENST00000365117 102 ntBASIC-0.4□□□□□ -2.47
HOXC5Q00444 RNU6-326P-201ENST00000365480 107 ntBASIC-0.4□□□□□ -2.47
HOXC5Q00444 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.4□□□□□ -2.47
HOXC5Q00444 RNU6-211P-201ENST00000384047 107 ntBASIC-0.4□□□□□ -2.47
HOXC5Q00444 RNY3P5-201ENST00000384127 102 ntBASIC-0.4□□□□□ -2.47
HOXC5Q00444 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.4□□□□□ -2.47
HOXC5Q00444 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.4□□□□□ -2.47
HOXC5Q00444 AC096531.1-201ENST00000419107 107 ntBASIC-0.4□□□□□ -2.47
HOXC5Q00444 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.4□□□□□ -2.47
HOXC5Q00444 SNORD126-201ENST00000459475 77 ntBASIC-0.4□□□□□ -2.47
HOXC5Q00444 RNU6-976P-201ENST00000516086 111 ntBASIC-0.4□□□□□ -2.47
HOXC5Q00444 SNORA27.4-201ENST00000516650 95 ntBASIC-0.4□□□□□ -2.47
HOXC5Q00444 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.4□□□□□ -2.47
HOXC5Q00444 RNU7-137P-201ENST00000516788 62 ntBASIC-0.4□□□□□ -2.47
HOXC5Q00444 RNU6-453P-201ENST00000516819 85 ntBASIC-0.4□□□□□ -2.47
HOXC5Q00444 NAMPTP3-201ENST00000569273 224 ntBASIC-0.4□□□□□ -2.47
HOXC5Q00444 AL356055.1-201ENST00000602528 446 ntBASIC-0.4□□□□□ -2.47
HOXC5Q00444 AL359881.1-201ENST00000602916 267 ntBASIC-0.4□□□□□ -2.47
HOXC5Q00444 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.4□□□□□ -2.47
HOXC5Q00444 MIR6507-201ENST00000613630 70 ntBASIC-0.4□□□□□ -2.47
HOXC5Q00444 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.41□□□□□ -2.48
HOXC5Q00444 Y_RNA.248-201ENST00000364501 109 ntBASIC-0.41□□□□□ -2.48
HOXC5Q00444 RNA5SP205-201ENST00000364653 136 ntBASIC-0.41□□□□□ -2.48
HOXC5Q00444 RNU6-865P-201ENST00000364772 107 ntBASIC-0.41□□□□□ -2.48
HOXC5Q00444 Y_RNA.645-201ENST00000391229 102 ntBASIC-0.41□□□□□ -2.48
HOXC5Q00444 AL606845.1-201ENST00000404881 255 ntBASIC-0.41□□□□□ -2.48
HOXC5Q00444 SNORD110-201ENST00000408189 75 ntBASIC-0.41□□□□□ -2.48
HOXC5Q00444 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.41□□□□□ -2.48
HOXC5Q00444 AC006210.1-201ENST00000424882 111 ntBASIC-0.41□□□□□ -2.48
HOXC5Q00444 AC098614.3-201ENST00000438957 440 ntBASIC-0.41□□□□□ -2.48
HOXC5Q00444 SNORA25.13-201ENST00000516395 103 ntBASIC-0.41□□□□□ -2.48
HOXC5Q00444 AL590491.3-201ENST00000610731 82 ntBASIC-0.41□□□□□ -2.48
HOXC5Q00444 RN7SL660P-201ENST00000614852 299 ntBASIC-0.41□□□□□ -2.48
HOXC5Q00444 AC084368.1-201ENST00000620935 65 ntBASIC-0.41□□□□□ -2.48
HOXC5Q00444 MIR4788-201ENST00000639104 80 ntBASIC-0.41□□□□□ -2.48
HOXC5Q00444 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.42□□□□□ -2.48
HOXC5Q00444 Y_RNA.142-201ENST00000363491 102 ntBASIC-0.42□□□□□ -2.48
HOXC5Q00444 Y_RNA.384-201ENST00000383909 102 ntBASIC-0.42□□□□□ -2.48
HOXC5Q00444 RNU6-449P-201ENST00000383914 107 ntBASIC-0.42□□□□□ -2.48
HOXC5Q00444 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.42□□□□□ -2.48
HOXC5Q00444 MTND4LP30-201ENST00000454092 297 ntBASIC-0.42□□□□□ -2.48
HOXC5Q00444 RNU6-561P-201ENST00000516222 102 ntBASIC-0.42□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms