Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 MIR5197-201ENST00000583721 112 ntBASIC-1.58□□□□□ -2.66
LSM6P62312 RNU6-10P-201ENST00000384036 107 ntBASIC-1.59□□□□□ -2.66
LSM6P62312 RNU6-763P-201ENST00000390865 106 ntBASIC-1.59□□□□□ -2.66
LSM6P62312 RNU6-510P-201ENST00000391239 108 ntBASIC-1.59□□□□□ -2.66
LSM6P62312 RNU6-1299P-201ENST00000516316 100 ntBASIC-1.59□□□□□ -2.66
LSM6P62312 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.59□□□□□ -2.66
LSM6P62312 MTND5P40-201ENST00000559945 246 ntBASIC-1.59□□□□□ -2.66
LSM6P62312 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.6□□□□□ -2.67
LSM6P62312 MIR587-201ENST00000384845 96 ntBASIC-1.6□□□□□ -2.67
LSM6P62312 MTND1P1-201ENST00000445453 368 ntBASIC-1.6□□□□□ -2.67
LSM6P62312 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-1.6□□□□□ -2.67
LSM6P62312 RNU6-191P-201ENST00000516295 94 ntBASIC-1.6□□□□□ -2.67
LSM6P62312 MIR4280-201ENST00000582178 76 ntBASIC-1.6□□□□□ -2.67
LSM6P62312 MIR3611-201ENST00000584484 83 ntBASIC-1.6□□□□□ -2.67
LSM6P62312 RNU6-154P-201ENST00000384306 106 ntBASIC-1.61□□□□□ -2.67
LSM6P62312 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.61□□□□□ -2.67
LSM6P62312 RNU6-274P-201ENST00000459566 107 ntBASIC-1.61□□□□□ -2.67
LSM6P62312 RNA5SP153-201ENST00000516498 76 ntBASIC-1.61□□□□□ -2.67
LSM6P62312 AC024909.2-201ENST00000553035 286 ntBASIC-1.61□□□□□ -2.67
LSM6P62312 MIR20A-201ENST00000362279 71 ntBASIC-1.62□□□□□ -2.67
LSM6P62312 Y_RNA.634-201ENST00000364811 113 ntBASIC-1.62□□□□□ -2.67
LSM6P62312 Y_RNA.304-201ENST00000365011 112 ntBASIC-1.62□□□□□ -2.67
LSM6P62312 Y_RNA.402-201ENST00000383972 102 ntBASIC-1.62□□□□□ -2.67
LSM6P62312 SNORD56B-201ENST00000384713 71 ntBASIC-1.62□□□□□ -2.67
LSM6P62312 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.62□□□□□ -2.67
LSM6P62312 MTND1P14-201ENST00000427400 950 ntBASIC-1.62□□□□□ -2.67
LSM6P62312 TRAJ51-201ENST00000504127 63 ntBASIC-1.62□□□□□ -2.67
LSM6P62312 AC040926.1-201ENST00000530195 238 ntBASIC-1.62□□□□□ -2.67
LSM6P62312 Z99129.1-201ENST00000612510 255 ntBASIC-1.62□□□□□ -2.67
LSM6P62312 Y_RNA.88-201ENST00000363029 99 ntBASIC-1.63□□□□□ -2.67
LSM6P62312 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.63□□□□□ -2.67
LSM6P62312 MIR526A2-201ENST00000390198 65 ntBASIC-1.63□□□□□ -2.67
LSM6P62312 Y_RNA.655-201ENST00000515919 96 ntBASIC-1.63□□□□□ -2.67
LSM6P62312 Y_RNA.713-201ENST00000517013 96 ntBASIC-1.63□□□□□ -2.67
LSM6P62312 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.63□□□□□ -2.67
LSM6P62312 MIR5692C2-201ENST00000577959 77 ntBASIC-1.63□□□□□ -2.67
LSM6P62312 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.63□□□□□ -2.67
LSM6P62312 VN1R91P-201ENST00000594377 169 ntBASIC-1.63□□□□□ -2.67
LSM6P62312 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.63□□□□□ -2.67
LSM6P62312 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.63□□□□□ -2.67
LSM6P62312 AL669831.3-213ENST00000636676 183 ntBASIC-1.63□□□□□ -2.67
LSM6P62312 SNORD114-10-201ENST00000363409 72 ntBASIC-1.64□□□□□ -2.67
LSM6P62312 RNY3P11-201ENST00000364153 102 ntBASIC-1.64□□□□□ -2.67
LSM6P62312 Y_RNA.314-201ENST00000365114 102 ntBASIC-1.64□□□□□ -2.67
LSM6P62312 Y_RNA.339-201ENST00000365325 102 ntBASIC-1.64□□□□□ -2.67
LSM6P62312 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.64□□□□□ -2.67
LSM6P62312 RNU6-30P-201ENST00000384561 107 ntBASIC-1.64□□□□□ -2.67
LSM6P62312 MIR519A1-201ENST00000385257 85 ntBASIC-1.64□□□□□ -2.67
LSM6P62312 SNORA53-201ENST00000391141 249 ntBASIC-1.64□□□□□ -2.67
LSM6P62312 SEPT14P8-201ENST00000508026 178 ntBASIC-1.64□□□□□ -2.67
LSM6P62312 AP000676.1-201ENST00000533307 52 ntBASIC-1.64□□□□□ -2.67
LSM6P62312 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC-1.64□□□□□ -2.67
LSM6P62312 SNORD113-5-201ENST00000607261 78 ntBASIC-1.64□□□□□ -2.67
LSM6P62312 uc_338.19-201ENST00000616808 99 ntBASIC-1.64□□□□□ -2.67
LSM6P62312 RNU6-1090P-201ENST00000364065 94 ntBASIC-1.65□□□□□ -2.67
LSM6P62312 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.65□□□□□ -2.67
LSM6P62312 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.65□□□□□ -2.67
LSM6P62312 RNU6-24P-201ENST00000384440 107 ntBASIC-1.65□□□□□ -2.67
LSM6P62312 Y_RNA.599-201ENST00000410489 109 ntBASIC-1.65□□□□□ -2.67
LSM6P62312 RNA5SP67-201ENST00000516422 131 ntBASIC-1.65□□□□□ -2.67
LSM6P62312 RNU7-137P-201ENST00000516788 62 ntBASIC-1.65□□□□□ -2.67
LSM6P62312 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.65□□□□□ -2.67
LSM6P62312 MIR617-201ENST00000385030 97 ntBASIC-1.66□□□□□ -2.68
LSM6P62312 MIR518B-201ENST00000385127 83 ntBASIC-1.66□□□□□ -2.68
LSM6P62312 MIR548I2-201ENST00000408348 149 ntBASIC-1.66□□□□□ -2.68
LSM6P62312 AC099799.1-201ENST00000439809 192 ntBASIC-1.66□□□□□ -2.68
LSM6P62312 SNORD38.3-201ENST00000516599 73 ntBASIC-1.66□□□□□ -2.68
LSM6P62312 MIR4460-201ENST00000577862 86 ntBASIC-1.66□□□□□ -2.68
LSM6P62312 MIR378F-201ENST00000578143 78 ntBASIC-1.66□□□□□ -2.68
LSM6P62312 AC097639.2-201ENST00000603159 172 ntBASIC-1.66□□□□□ -2.68
LSM6P62312 AC138305.3-201ENST00000624988 240 ntBASIC-1.66□□□□□ -2.68
LSM6P62312 MIR376A2-201ENST00000636782 80 ntBASIC-1.66□□□□□ -2.68
LSM6P62312 Y_RNA.91-201ENST00000363042 107 ntBASIC-1.67□□□□□ -2.68
LSM6P62312 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.67□□□□□ -2.68
LSM6P62312 SNORD115-44-201ENST00000365391 82 ntBASIC-1.67□□□□□ -2.68
LSM6P62312 Y_RNA.573-201ENST00000384763 105 ntBASIC-1.67□□□□□ -2.68
LSM6P62312 MTND1P34-201ENST00000438556 671 ntBASIC-1.67□□□□□ -2.68
LSM6P62312 AC093423.1-201ENST00000440817 142 ntBASIC-1.67□□□□□ -2.68
LSM6P62312 RNU6-764P-201ENST00000516396 105 ntBASIC-1.67□□□□□ -2.68
LSM6P62312 RNA5SP470-201ENST00000516463 106 ntBASIC-1.67□□□□□ -2.68
LSM6P62312 MIR3179-1-201ENST00000578940 84 ntBASIC-1.67□□□□□ -2.68
LSM6P62312 MIR3179-2-201ENST00000579107 84 ntBASIC-1.67□□□□□ -2.68
LSM6P62312 MIR3179-3-201ENST00000579566 84 ntBASIC-1.67□□□□□ -2.68
LSM6P62312 C8orf59P2-201ENST00000603441 271 ntBASIC-1.67□□□□□ -2.68
LSM6P62312 MIR3179-4-201ENST00000617599 84 ntBASIC-1.67□□□□□ -2.68
LSM6P62312 MTND5P18-201ENST00000445624 1801 ntBASIC-1.68□□□□□ -2.68
LSM6P62312 RNU4-16P-201ENST00000364737 141 ntBASIC-1.68□□□□□ -2.68
LSM6P62312 Y_RNA.432-201ENST00000384087 111 ntBASIC-1.68□□□□□ -2.68
LSM6P62312 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.68□□□□□ -2.68
LSM6P62312 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.68□□□□□ -2.68
LSM6P62312 MIR4499-201ENST00000584834 69 ntBASIC-1.68□□□□□ -2.68
LSM6P62312 AL121655.1-201ENST00000605811 308 ntBASIC-1.68□□□□□ -2.68
LSM6P62312 AC133104.2-201ENST00000615272 193 ntBASIC-1.68□□□□□ -2.68
LSM6P62312 MIR519E-201ENST00000385075 84 ntBASIC-1.69□□□□□ -2.68
LSM6P62312 AC244090.1-201ENST00000441884 93 ntBASIC-1.69□□□□□ -2.68
LSM6P62312 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.69□□□□□ -2.68
LSM6P62312 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.69□□□□□ -2.68
LSM6P62312 RNU6-120P-201ENST00000516077 103 ntBASIC-1.69□□□□□ -2.68
LSM6P62312 RNU6-415P-201ENST00000516252 97 ntBASIC-1.69□□□□□ -2.68
LSM6P62312 SNORA40.17-201ENST00000517256 115 ntBASIC-1.69□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 186.2 ms