Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 MIR8065-201ENST00000620577 100 ntBASIC1.59□□□□□ -2.15
PER3P56645 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
PER3P56645 Y_RNA.224-201ENST00000364308 111 ntBASIC1.58□□□□□ -2.16
PER3P56645 RNA5SP261-201ENST00000410536 106 ntBASIC1.58□□□□□ -2.16
PER3P56645 CYP3A52P-201ENST00000563326 91 ntBASIC1.58□□□□□ -2.16
PER3P56645 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
PER3P56645 Y_RNA.346-201ENST00000365385 112 ntBASIC1.57□□□□□ -2.16
PER3P56645 Y_RNA.470-201ENST00000384307 117 ntBASIC1.57□□□□□ -2.16
PER3P56645 RNU6-1054P-201ENST00000411293 104 ntBASIC1.57□□□□□ -2.16
PER3P56645 AL022718.1-201ENST00000412004 84 ntBASIC1.57□□□□□ -2.16
PER3P56645 AC244023.1-201ENST00000426884 112 ntBASIC1.57□□□□□ -2.16
PER3P56645 COX6CP6-201ENST00000490840 228 ntBASIC1.57□□□□□ -2.16
PER3P56645 AC242498.1-201ENST00000604134 111 ntBASIC1.57□□□□□ -2.16
PER3P56645 U6.95-201ENST00000636931 70 ntBASIC1.57□□□□□ -2.16
PER3P56645 AP000648.3-201ENST00000623539 4507 ntBASIC1.56□□□□□ -2.16
PER3P56645 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.56□□□□□ -2.16
PER3P56645 RNA5SP264-201ENST00000363115 107 ntBASIC1.56□□□□□ -2.16
PER3P56645 Y_RNA.198-201ENST00000364013 98 ntBASIC1.56□□□□□ -2.16
PER3P56645 Y_RNA.531-201ENST00000384589 121 ntBASIC1.56□□□□□ -2.16
PER3P56645 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.56□□□□□ -2.16
PER3P56645 AC048334.1-201ENST00000477975 159 ntBASIC1.56□□□□□ -2.16
PER3P56645 RN7SKP88-201ENST00000516847 250 ntBASIC1.56□□□□□ -2.16
PER3P56645 MIR3618-201ENST00000580330 88 ntBASIC1.56□□□□□ -2.16
PER3P56645 7SK.8-201ENST00000612110 250 ntBASIC1.56□□□□□ -2.16
PER3P56645 7SK.11-201ENST00000615477 250 ntBASIC1.56□□□□□ -2.16
PER3P56645 AL121890.5-201ENST00000620848 304 ntBASIC1.56□□□□□ -2.16
PER3P56645 7SK.13-201ENST00000622040 250 ntBASIC1.56□□□□□ -2.16
PER3P56645 SNORD115-2-201ENST00000362842 82 ntBASIC1.55□□□□□ -2.16
PER3P56645 SNORD115-20-201ENST00000365099 82 ntBASIC1.55□□□□□ -2.16
PER3P56645 Y_RNA.327-201ENST00000365201 102 ntBASIC1.55□□□□□ -2.16
PER3P56645 Y_RNA.629-201ENST00000411368 105 ntBASIC1.55□□□□□ -2.16
PER3P56645 RPS29P11-201ENST00000496507 171 ntBASIC1.55□□□□□ -2.16
PER3P56645 AC113410.1-201ENST00000505029 247 ntBASIC1.55□□□□□ -2.16
PER3P56645 MIR4419B-201ENST00000577260 68 ntBASIC1.55□□□□□ -2.16
PER3P56645 MIR4303-201ENST00000581299 66 ntBASIC1.55□□□□□ -2.16
PER3P56645 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.55□□□□□ -2.16
PER3P56645 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
PER3P56645 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
PER3P56645 Y_RNA.273-201ENST00000364703 102 ntBASIC1.54□□□□□ -2.16
PER3P56645 Y_RNA.363-201ENST00000365529 113 ntBASIC1.54□□□□□ -2.16
PER3P56645 RNU6-997P-201ENST00000384725 107 ntBASIC1.54□□□□□ -2.16
PER3P56645 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.54□□□□□ -2.16
PER3P56645 AC245047.7-201ENST00000440265 293 ntBASIC1.54□□□□□ -2.16
PER3P56645 RNU6-893P-201ENST00000458841 100 ntBASIC1.54□□□□□ -2.16
PER3P56645 RNU7-95P-201ENST00000459222 64 ntBASIC1.54□□□□□ -2.16
PER3P56645 RNU7-113P-201ENST00000459273 62 ntBASIC1.54□□□□□ -2.16
PER3P56645 MIR1270-201ENST00000459320 83 ntBASIC1.54□□□□□ -2.16
PER3P56645 MIR6516-201ENST00000630554 81 ntBASIC1.54□□□□□ -2.16
PER3P56645 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.54□□□□□ -2.16
PER3P56645 RNU6-834P-201ENST00000362367 110 ntBASIC1.53□□□□□ -2.16
PER3P56645 RNU6-1144P-201ENST00000384247 104 ntBASIC1.53□□□□□ -2.16
PER3P56645 RNU6-429P-201ENST00000384582 108 ntBASIC1.53□□□□□ -2.16
PER3P56645 SNORD38B-201ENST00000384690 67 ntBASIC1.53□□□□□ -2.16
PER3P56645 SNORD12C-201ENST00000386307 89 ntBASIC1.53□□□□□ -2.16
PER3P56645 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.53□□□□□ -2.16
PER3P56645 RPS23P4-201ENST00000487908 423 ntBASIC1.53□□□□□ -2.16
PER3P56645 SNORD38B-202ENST00000625943 69 ntBASIC1.53□□□□□ -2.16
PER3P56645 MIR103A2-201ENST00000362154 78 ntBASIC1.52□□□□□ -2.17
PER3P56645 RNU6-1064P-201ENST00000410626 104 ntBASIC1.52□□□□□ -2.17
PER3P56645 Y_RNA.649-201ENST00000459077 103 ntBASIC1.52□□□□□ -2.17
PER3P56645 SNORA31.2-201ENST00000516019 134 ntBASIC1.52□□□□□ -2.17
PER3P56645 AL670379.3-201ENST00000605040 251 ntBASIC1.52□□□□□ -2.17
PER3P56645 RNU6-654P-201ENST00000364373 107 ntBASIC1.51□□□□□ -2.17
PER3P56645 RNU6-392P-201ENST00000364926 101 ntBASIC1.51□□□□□ -2.17
PER3P56645 RNU6-396P-201ENST00000365369 105 ntBASIC1.51□□□□□ -2.17
PER3P56645 RNU6-342P-201ENST00000384521 104 ntBASIC1.51□□□□□ -2.17
PER3P56645 RNU6-476P-201ENST00000384726 107 ntBASIC1.51□□□□□ -2.17
PER3P56645 MIR489-201ENST00000384923 84 ntBASIC1.51□□□□□ -2.17
PER3P56645 MIR548A1-201ENST00000385041 97 ntBASIC1.51□□□□□ -2.17
PER3P56645 MIR548A3-201ENST00000385297 97 ntBASIC1.51□□□□□ -2.17
PER3P56645 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.51□□□□□ -2.17
PER3P56645 RNU6-970P-201ENST00000516312 107 ntBASIC1.51□□□□□ -2.17
PER3P56645 RNA5SP33-201ENST00000516687 98 ntBASIC1.51□□□□□ -2.17
PER3P56645 RNU11-2P-201ENST00000516898 142 ntBASIC1.51□□□□□ -2.17
PER3P56645 MTND5P34-201ENST00000568888 325 ntBASIC1.51□□□□□ -2.17
PER3P56645 MIR548AE2-201ENST00000583456 67 ntBASIC1.51□□□□□ -2.17
PER3P56645 MIR6504-201ENST00000613520 61 ntBASIC1.51□□□□□ -2.17
PER3P56645 MIR6129-201ENST00000616087 109 ntBASIC1.51□□□□□ -2.17
PER3P56645 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.51□□□□□ -2.17
PER3P56645 Y_RNA.213-201ENST00000364178 111 ntBASIC1.5□□□□□ -2.17
PER3P56645 Y_RNA.354-201ENST00000365448 111 ntBASIC1.5□□□□□ -2.17
PER3P56645 SNORA67.6-201ENST00000391093 99 ntBASIC1.5□□□□□ -2.17
PER3P56645 RNU1-92P-201ENST00000517017 135 ntBASIC1.5□□□□□ -2.17
PER3P56645 RNU6-1056P-201ENST00000383996 107 ntBASIC1.49□□□□□ -2.17
PER3P56645 SNORD20-201ENST00000384550 80 ntBASIC1.49□□□□□ -2.17
PER3P56645 RNU6-613P-201ENST00000410412 108 ntBASIC1.49□□□□□ -2.17
PER3P56645 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.49□□□□□ -2.17
PER3P56645 AC087741.2-201ENST00000619415 172 ntBASIC1.49□□□□□ -2.17
PER3P56645 SNORA7.1-201ENST00000363750 139 ntBASIC1.48□□□□□ -2.17
PER3P56645 Y_RNA.191-201ENST00000363972 113 ntBASIC1.48□□□□□ -2.17
PER3P56645 RNU6-42P-201ENST00000384165 107 ntBASIC1.48□□□□□ -2.17
PER3P56645 MT-TN-201ENST00000387400 73 ntBASIC1.48□□□□□ -2.17
PER3P56645 SNORA75.2-201ENST00000391138 150 ntBASIC1.48□□□□□ -2.17
PER3P56645 SNORA75.3-201ENST00000391231 150 ntBASIC1.48□□□□□ -2.17
PER3P56645 RNA5SP95-201ENST00000410319 137 ntBASIC1.48□□□□□ -2.17
PER3P56645 RNU4-69P-201ENST00000410677 143 ntBASIC1.48□□□□□ -2.17
PER3P56645 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.48□□□□□ -2.17
PER3P56645 MIR2115-201ENST00000516657 100 ntBASIC1.48□□□□□ -2.17
PER3P56645 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.48□□□□□ -2.17
PER3P56645 AL078603.1-201ENST00000603824 313 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms