Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC087499.7-201ENST00000441958 109 ntBASIC0.62□□□□□ -2.31
CDH13P55290 AL590095.2-201ENST00000604136 117 ntBASIC0.62□□□□□ -2.31
CDH13P55290 MIR6841-201ENST00000637129 72 ntBASIC0.62□□□□□ -2.31
CDH13P55290 RNU6-1020P-201ENST00000363684 107 ntBASIC0.61□□□□□ -2.31
CDH13P55290 RNU6-312P-201ENST00000364629 107 ntBASIC0.61□□□□□ -2.31
CDH13P55290 RNU6-574P-201ENST00000384265 107 ntBASIC0.61□□□□□ -2.31
CDH13P55290 MIR508-201ENST00000384857 115 ntBASIC0.61□□□□□ -2.31
CDH13P55290 MIR548J-201ENST00000408833 112 ntBASIC0.61□□□□□ -2.31
CDH13P55290 RNU6-1149P-201ENST00000516810 97 ntBASIC0.61□□□□□ -2.31
CDH13P55290 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.61□□□□□ -2.31
CDH13P55290 MIR151B-201ENST00000584249 96 ntBASIC0.61□□□□□ -2.31
CDH13P55290 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.61□□□□□ -2.31
CDH13P55290 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
CDH13P55290 Y_RNA.393-201ENST00000383936 102 ntBASIC0.6□□□□□ -2.31
CDH13P55290 RNU6-447P-201ENST00000410293 104 ntBASIC0.6□□□□□ -2.31
CDH13P55290 RNU6-1118P-201ENST00000410382 104 ntBASIC0.6□□□□□ -2.31
CDH13P55290 RNU6-1076P-201ENST00000410397 104 ntBASIC0.6□□□□□ -2.31
CDH13P55290 RNU6-355P-201ENST00000410427 104 ntBASIC0.6□□□□□ -2.31
CDH13P55290 RNU6-791P-201ENST00000410467 104 ntBASIC0.6□□□□□ -2.31
CDH13P55290 RNU6-705P-201ENST00000410601 104 ntBASIC0.6□□□□□ -2.31
CDH13P55290 RNU6-1100P-201ENST00000410691 104 ntBASIC0.6□□□□□ -2.31
CDH13P55290 RNU6-860P-201ENST00000410860 104 ntBASIC0.6□□□□□ -2.31
CDH13P55290 RNA5SP222-201ENST00000411039 105 ntBASIC0.6□□□□□ -2.31
CDH13P55290 RNU6-1217P-201ENST00000411276 104 ntBASIC0.6□□□□□ -2.31
CDH13P55290 RNU6-785P-201ENST00000411324 104 ntBASIC0.6□□□□□ -2.31
CDH13P55290 AC004812.1-201ENST00000540773 146 ntBASIC0.6□□□□□ -2.31
CDH13P55290 AC018659.1-201ENST00000551083 169 ntBASIC0.6□□□□□ -2.31
CDH13P55290 AC133485.1-201ENST00000567176 124 ntBASIC0.6□□□□□ -2.31
CDH13P55290 AC138907.6-201ENST00000568401 126 ntBASIC0.6□□□□□ -2.31
CDH13P55290 SNORD92-201ENST00000585078 85 ntBASIC0.6□□□□□ -2.31
CDH13P55290 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.6□□□□□ -2.31
CDH13P55290 U6.90-201ENST00000614007 104 ntBASIC0.6□□□□□ -2.31
CDH13P55290 U6.70-201ENST00000620287 104 ntBASIC0.6□□□□□ -2.31
CDH13P55290 SNORA22.1-201ENST00000362701 134 ntBASIC0.59□□□□□ -2.31
CDH13P55290 RNU6-364P-201ENST00000384387 107 ntBASIC0.59□□□□□ -2.31
CDH13P55290 Y_RNA.521-201ENST00000384560 114 ntBASIC0.59□□□□□ -2.31
CDH13P55290 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
CDH13P55290 RNA5SP237-201ENST00000410414 113 ntBASIC0.59□□□□□ -2.31
CDH13P55290 RNA5SP220-201ENST00000516298 104 ntBASIC0.59□□□□□ -2.31
CDH13P55290 SNORA4-201ENST00000584302 138 ntBASIC0.59□□□□□ -2.31
CDH13P55290 AL662814.1-201ENST00000617364 121 ntBASIC0.59□□□□□ -2.31
CDH13P55290 RNU7-156P-201ENST00000517214 74 ntBASIC0.58□□□□□ -2.32
CDH13P55290 AC090897.1-201ENST00000580909 226 ntBASIC0.58□□□□□ -2.32
CDH13P55290 MIR6734-201ENST00000621166 68 ntBASIC0.58□□□□□ -2.32
CDH13P55290 Y_RNA.116-201ENST00000363292 103 ntBASIC0.57□□□□□ -2.32
CDH13P55290 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.57□□□□□ -2.32
CDH13P55290 SNORD100-201ENST00000408573 76 ntBASIC0.57□□□□□ -2.32
CDH13P55290 RNU7-102P-201ENST00000458948 62 ntBASIC0.57□□□□□ -2.32
CDH13P55290 AC107027.2-201ENST00000512197 115 ntBASIC0.57□□□□□ -2.32
CDH13P55290 RNA5SP121-201ENST00000516537 101 ntBASIC0.57□□□□□ -2.32
CDH13P55290 MIR3612-201ENST00000579753 87 ntBASIC0.57□□□□□ -2.32
CDH13P55290 MTND5P32-201ENST00000560711 1802 ntBASIC0.57□□□□□ -2.32
CDH13P55290 MIR18A-201ENST00000362310 71 ntBASIC0.56□□□□□ -2.32
CDH13P55290 Y_RNA.233-201ENST00000364407 101 ntBASIC0.56□□□□□ -2.32
CDH13P55290 RNU6-47P-201ENST00000383866 107 ntBASIC0.56□□□□□ -2.32
CDH13P55290 Y_RNA.401-201ENST00000383965 117 ntBASIC0.56□□□□□ -2.32
CDH13P55290 SNORA36.2-201ENST00000384004 127 ntBASIC0.56□□□□□ -2.32
CDH13P55290 RNY1P6-201ENST00000384193 109 ntBASIC0.56□□□□□ -2.32
CDH13P55290 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
CDH13P55290 MIR140-201ENST00000385282 100 ntBASIC0.56□□□□□ -2.32
CDH13P55290 MT-TG-201ENST00000387429 68 ntBASIC0.56□□□□□ -2.32
CDH13P55290 RNU4-54P-201ENST00000516428 129 ntBASIC0.56□□□□□ -2.32
CDH13P55290 RNU6-1223P-201ENST00000517124 104 ntBASIC0.56□□□□□ -2.32
CDH13P55290 AC130289.1-201ENST00000577321 73 ntBASIC0.56□□□□□ -2.32
CDH13P55290 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.56□□□□□ -2.32
CDH13P55290 AC141273.2-201ENST00000618989 130 ntBASIC0.56□□□□□ -2.32
CDH13P55290 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
CDH13P55290 Y_RNA.337-201ENST00000365312 102 ntBASIC0.55□□□□□ -2.32
CDH13P55290 MIR518E-201ENST00000385252 88 ntBASIC0.55□□□□□ -2.32
CDH13P55290 RNU5E-9P-201ENST00000411164 104 ntBASIC0.55□□□□□ -2.32
CDH13P55290 RPL39P25-201ENST00000449384 154 ntBASIC0.55□□□□□ -2.32
CDH13P55290 RN7SKP12-201ENST00000516275 143 ntBASIC0.55□□□□□ -2.32
CDH13P55290 MIR5000-201ENST00000577717 103 ntBASIC0.55□□□□□ -2.32
CDH13P55290 AC072026.1-201ENST00000605023 201 ntBASIC0.55□□□□□ -2.32
CDH13P55290 Y_RNA.52-201ENST00000362760 96 ntBASIC0.54□□□□□ -2.32
CDH13P55290 Y_RNA.188-201ENST00000363952 111 ntBASIC0.54□□□□□ -2.32
CDH13P55290 RNU6-945P-201ENST00000383947 107 ntBASIC0.54□□□□□ -2.32
CDH13P55290 RNU6-42P-201ENST00000384165 107 ntBASIC0.54□□□□□ -2.32
CDH13P55290 RNU6-768P-201ENST00000384683 107 ntBASIC0.54□□□□□ -2.32
CDH13P55290 RNU6-1237P-201ENST00000384777 107 ntBASIC0.54□□□□□ -2.32
CDH13P55290 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.54□□□□□ -2.32
CDH13P55290 SNORD93-201ENST00000408813 74 ntBASIC0.54□□□□□ -2.32
CDH13P55290 AL157398.1-201ENST00000452981 186 ntBASIC0.54□□□□□ -2.32
CDH13P55290 AC002350.1-201ENST00000490759 375 ntBASIC0.54□□□□□ -2.32
CDH13P55290 AC141846.1-201ENST00000568348 142 ntBASIC0.54□□□□□ -2.32
CDH13P55290 MIR4714-201ENST00000580728 77 ntBASIC0.54□□□□□ -2.32
CDH13P55290 AC008608.1-201ENST00000603910 127 ntBASIC0.54□□□□□ -2.32
CDH13P55290 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
CDH13P55290 Y_RNA.644-201ENST00000459006 113 ntBASIC0.53□□□□□ -2.32
CDH13P55290 RNU6-1219P-201ENST00000516143 112 ntBASIC0.53□□□□□ -2.32
CDH13P55290 Y_RNA.674-201ENST00000516362 113 ntBASIC0.53□□□□□ -2.32
CDH13P55290 RNU6-448P-201ENST00000517052 107 ntBASIC0.53□□□□□ -2.32
CDH13P55290 MIR3646-201ENST00000578301 84 ntBASIC0.53□□□□□ -2.32
CDH13P55290 Y_RNA.274-201ENST00000364714 101 ntBASIC0.52□□□□□ -2.33
CDH13P55290 RNU6-818P-201ENST00000364837 108 ntBASIC0.52□□□□□ -2.33
CDH13P55290 SNORA75.5-201ENST00000391291 81 ntBASIC0.52□□□□□ -2.33
CDH13P55290 RNU6-1086P-201ENST00000410930 100 ntBASIC0.52□□□□□ -2.33
CDH13P55290 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.52□□□□□ -2.33
CDH13P55290 RNA5SP236-201ENST00000516169 116 ntBASIC0.52□□□□□ -2.33
CDH13P55290 RNU6-1271P-201ENST00000517049 105 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 223.5 ms