Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 RNU6-177P-201ENST00000411257 104 ntBASIC0.69□□□□□ -2.3
NEDD4P46934 AC006461.1-201ENST00000412637 326 ntBASIC0.69□□□□□ -2.3
NEDD4P46934 HMGN1P33-201ENST00000432945 451 ntBASIC0.69□□□□□ -2.3
NEDD4P46934 snoU13.2-201ENST00000459201 104 ntBASIC0.69□□□□□ -2.3
NEDD4P46934 AC130289.1-201ENST00000577321 73 ntBASIC0.69□□□□□ -2.3
NEDD4P46934 AC091932.4-201ENST00000623386 200 ntBASIC0.69□□□□□ -2.3
NEDD4P46934 RNU6-379P-201ENST00000363813 104 ntBASIC0.68□□□□□ -2.3
NEDD4P46934 Y_RNA.233-201ENST00000364407 101 ntBASIC0.68□□□□□ -2.3
NEDD4P46934 MIR588-201ENST00000384900 83 ntBASIC0.68□□□□□ -2.3
NEDD4P46934 SNORA26.6-201ENST00000391256 115 ntBASIC0.68□□□□□ -2.3
NEDD4P46934 AC072026.1-201ENST00000605023 201 ntBASIC0.68□□□□□ -2.3
NEDD4P46934 AL596211.1-201ENST00000569873 2277 ntBASIC0.68□□□□□ -2.3
NEDD4P46934 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.68□□□□□ -2.3
NEDD4P46934 RNA5SP325-201ENST00000363756 130 ntBASIC0.67□□□□□ -2.3
NEDD4P46934 Y_RNA.205-201ENST00000364128 113 ntBASIC0.67□□□□□ -2.3
NEDD4P46934 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
NEDD4P46934 RNU6-47P-201ENST00000383866 107 ntBASIC0.67□□□□□ -2.3
NEDD4P46934 SNORA20-201ENST00000384662 132 ntBASIC0.67□□□□□ -2.3
NEDD4P46934 SNORD105-201ENST00000386910 85 ntBASIC0.67□□□□□ -2.3
NEDD4P46934 RNU6-893P-201ENST00000458841 100 ntBASIC0.67□□□□□ -2.3
NEDD4P46934 Y_RNA.644-201ENST00000459006 113 ntBASIC0.67□□□□□ -2.3
NEDD4P46934 AC107027.2-201ENST00000512197 115 ntBASIC0.67□□□□□ -2.3
NEDD4P46934 PSMC1P5-201ENST00000512850 177 ntBASIC0.67□□□□□ -2.3
NEDD4P46934 Y_RNA.674-201ENST00000516362 113 ntBASIC0.67□□□□□ -2.3
NEDD4P46934 SCARNA15-202ENST00000516881 127 ntBASIC0.67□□□□□ -2.3
NEDD4P46934 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
NEDD4P46934 Y_RNA.297-201ENST00000364950 91 ntBASIC0.66□□□□□ -2.3
NEDD4P46934 Y_RNA.337-201ENST00000365312 102 ntBASIC0.66□□□□□ -2.3
NEDD4P46934 RNU6-110P-201ENST00000384508 104 ntBASIC0.66□□□□□ -2.3
NEDD4P46934 RNY1P4-201ENST00000384595 115 ntBASIC0.66□□□□□ -2.3
NEDD4P46934 RNU6-1165P-201ENST00000410119 107 ntBASIC0.66□□□□□ -2.3
NEDD4P46934 RNU6-1190P-201ENST00000410811 104 ntBASIC0.66□□□□□ -2.3
NEDD4P46934 AL606490.4-201ENST00000423117 127 ntBASIC0.66□□□□□ -2.3
NEDD4P46934 Y_RNA.700-201ENST00000516806 100 ntBASIC0.66□□□□□ -2.3
NEDD4P46934 Y_RNA.274-201ENST00000364714 101 ntBASIC0.65□□□□□ -2.3
NEDD4P46934 RNU6-200P-201ENST00000364743 107 ntBASIC0.65□□□□□ -2.3
NEDD4P46934 RNU6-1335P-201ENST00000365426 107 ntBASIC0.65□□□□□ -2.3
NEDD4P46934 MIR563-201ENST00000385080 79 ntBASIC0.65□□□□□ -2.3
NEDD4P46934 MIR936-201ENST00000401264 98 ntBASIC0.65□□□□□ -2.3
NEDD4P46934 SNORD99-201ENST00000408612 74 ntBASIC0.65□□□□□ -2.3
NEDD4P46934 RNU6-977P-201ENST00000516411 103 ntBASIC0.65□□□□□ -2.3
NEDD4P46934 RNU6-1149P-201ENST00000516810 97 ntBASIC0.65□□□□□ -2.3
NEDD4P46934 AC104465.1-201ENST00000611365 139 ntBASIC0.65□□□□□ -2.3
NEDD4P46934 MIR6740-201ENST00000618268 113 ntBASIC0.65□□□□□ -2.3
NEDD4P46934 RNU6-369P-201ENST00000362515 102 ntBASIC0.64□□□□□ -2.31
NEDD4P46934 Y_RNA.357-201ENST00000365487 109 ntBASIC0.64□□□□□ -2.31
NEDD4P46934 MIR92A1-201ENST00000385233 78 ntBASIC0.64□□□□□ -2.31
NEDD4P46934 SNORD12C-201ENST00000386307 89 ntBASIC0.64□□□□□ -2.31
NEDD4P46934 MT-TF-201ENST00000387314 71 ntBASIC0.64□□□□□ -2.31
NEDD4P46934 Y_RNA.793-201ENST00000411222 111 ntBASIC0.64□□□□□ -2.31
NEDD4P46934 SNORD83.1-201ENST00000411362 77 ntBASIC0.64□□□□□ -2.31
NEDD4P46934 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.64□□□□□ -2.31
NEDD4P46934 snoU13.21-201ENST00000459368 105 ntBASIC0.64□□□□□ -2.31
NEDD4P46934 RNU7-45P-201ENST00000459460 63 ntBASIC0.64□□□□□ -2.31
NEDD4P46934 RNU6-1219P-201ENST00000516143 112 ntBASIC0.64□□□□□ -2.31
NEDD4P46934 MIR4771-2-201ENST00000577758 74 ntBASIC0.64□□□□□ -2.31
NEDD4P46934 MIR4771-1-201ENST00000582617 74 ntBASIC0.64□□□□□ -2.31
NEDD4P46934 AC021613.1-201ENST00000623880 111 ntBASIC0.64□□□□□ -2.31
NEDD4P46934 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.64□□□□□ -2.31
NEDD4P46934 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
NEDD4P46934 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
NEDD4P46934 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.64□□□□□ -2.31
NEDD4P46934 AC098934.3-201ENST00000430450 190 ntBASIC0.64□□□□□ -2.31
NEDD4P46934 MIR4676-201ENST00000583078 72 ntBASIC0.64□□□□□ -2.31
NEDD4P46934 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.64□□□□□ -2.31
NEDD4P46934 AC010332.2-201ENST00000613083 1904 ntBASIC0.63□□□□□ -2.31
NEDD4P46934 AC023934.1-201ENST00000574529 2389 ntBASIC0.63□□□□□ -2.31
NEDD4P46934 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.63□□□□□ -2.31
NEDD4P46934 RNA5SP347-201ENST00000362445 119 ntBASIC0.63□□□□□ -2.31
NEDD4P46934 RNU6-239P-201ENST00000390990 99 ntBASIC0.63□□□□□ -2.31
NEDD4P46934 RNU1-119P-201ENST00000391122 165 ntBASIC0.63□□□□□ -2.31
NEDD4P46934 RNU6-388P-201ENST00000517012 105 ntBASIC0.63□□□□□ -2.31
NEDD4P46934 RNU6-389P-201ENST00000517048 105 ntBASIC0.63□□□□□ -2.31
NEDD4P46934 AP002392.1-201ENST00000537692 208 ntBASIC0.63□□□□□ -2.31
NEDD4P46934 MIR4711-201ENST00000578274 70 ntBASIC0.63□□□□□ -2.31
NEDD4P46934 MIR3646-201ENST00000578301 84 ntBASIC0.63□□□□□ -2.31
NEDD4P46934 MIR4804-201ENST00000581683 73 ntBASIC0.63□□□□□ -2.31
NEDD4P46934 AC078938.1-201ENST00000620993 318 ntBASIC0.63□□□□□ -2.31
NEDD4P46934 MIR6841-201ENST00000637129 72 ntBASIC0.63□□□□□ -2.31
NEDD4P46934 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.62□□□□□ -2.31
NEDD4P46934 AL589743.1-201ENST00000551932 2712 ntBASIC0.62□□□□□ -2.31
NEDD4P46934 MIR30D-201ENST00000362283 70 ntBASIC0.62□□□□□ -2.31
NEDD4P46934 SNORA22.1-201ENST00000362701 134 ntBASIC0.62□□□□□ -2.31
NEDD4P46934 RNU6-768P-201ENST00000384683 107 ntBASIC0.62□□□□□ -2.31
NEDD4P46934 MIR520F-201ENST00000384824 87 ntBASIC0.62□□□□□ -2.31
NEDD4P46934 MIR605-201ENST00000385078 83 ntBASIC0.62□□□□□ -2.31
NEDD4P46934 SNORA75.5-201ENST00000391291 81 ntBASIC0.62□□□□□ -2.31
NEDD4P46934 MIR938-201ENST00000401216 83 ntBASIC0.62□□□□□ -2.31
NEDD4P46934 RNA5SP193-201ENST00000410353 107 ntBASIC0.62□□□□□ -2.31
NEDD4P46934 AC020891.4-201ENST00000605745 93 ntBASIC0.62□□□□□ -2.31
NEDD4P46934 MTND5P32-201ENST00000560711 1802 ntBASIC0.61□□□□□ -2.31
NEDD4P46934 Y_RNA.29-201ENST00000362570 113 ntBASIC0.61□□□□□ -2.31
NEDD4P46934 Y_RNA.240-201ENST00000364469 95 ntBASIC0.61□□□□□ -2.31
NEDD4P46934 RNU6-818P-201ENST00000364837 108 ntBASIC0.61□□□□□ -2.31
NEDD4P46934 RNU6-1318P-201ENST00000365389 103 ntBASIC0.61□□□□□ -2.31
NEDD4P46934 MIR125B2-201ENST00000385128 89 ntBASIC0.61□□□□□ -2.31
NEDD4P46934 MIR1257-201ENST00000408490 117 ntBASIC0.61□□□□□ -2.31
NEDD4P46934 RNA5SP237-201ENST00000410414 113 ntBASIC0.61□□□□□ -2.31
NEDD4P46934 AC244098.3-201ENST00000424803 96 ntBASIC0.61□□□□□ -2.31
NEDD4P46934 AC092628.1-201ENST00000436250 252 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 192.6 ms