Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 MTND3P8-201ENST00000412909 339 ntBASIC-1.47□□□□□ -2.64
SDC4P31431 MTND5P5-201ENST00000503764 376 ntBASIC-1.47□□□□□ -2.64
SDC4P31431 RNA5SP33-201ENST00000516687 98 ntBASIC-1.47□□□□□ -2.64
SDC4P31431 AC040926.1-201ENST00000530195 238 ntBASIC-1.47□□□□□ -2.64
SDC4P31431 DLEU2_5.2-201ENST00000610606 84 ntBASIC-1.47□□□□□ -2.64
SDC4P31431 AL669831.3-213ENST00000636676 183 ntBASIC-1.47□□□□□ -2.64
SDC4P31431 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.48□□□□□ -2.65
SDC4P31431 RNU6-483P-201ENST00000384088 108 ntBASIC-1.48□□□□□ -2.65
SDC4P31431 RNU6-571P-201ENST00000384128 107 ntBASIC-1.48□□□□□ -2.65
SDC4P31431 Y_RNA.454-201ENST00000384224 113 ntBASIC-1.48□□□□□ -2.65
SDC4P31431 MIR147A-201ENST00000385079 72 ntBASIC-1.48□□□□□ -2.65
SDC4P31431 SNORD63B-201ENST00000411005 70 ntBASIC-1.48□□□□□ -2.65
SDC4P31431 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-1.48□□□□□ -2.65
SDC4P31431 RN7SKP298-201ENST00000515950 94 ntBASIC-1.48□□□□□ -2.65
SDC4P31431 RNU6-1016P-201ENST00000516689 94 ntBASIC-1.48□□□□□ -2.65
SDC4P31431 SNORA40.17-201ENST00000517256 115 ntBASIC-1.48□□□□□ -2.65
SDC4P31431 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.48□□□□□ -2.65
SDC4P31431 AC093783.1-201ENST00000612976 329 ntBASIC-1.48□□□□□ -2.65
SDC4P31431 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.48□□□□□ -2.65
SDC4P31431 MIR6854-201ENST00000614935 69 ntBASIC-1.48□□□□□ -2.65
SDC4P31431 Z69908.1-201ENST00000622603 247 ntBASIC-1.48□□□□□ -2.65
SDC4P31431 Y_RNA.813-201ENST00000364639 102 ntBASIC-1.49□□□□□ -2.65
SDC4P31431 MTND3P10-201ENST00000450967 341 ntBASIC-1.49□□□□□ -2.65
SDC4P31431 MIR2113-201ENST00000459007 91 ntBASIC-1.49□□□□□ -2.65
SDC4P31431 AC097510.1-201ENST00000510945 133 ntBASIC-1.49□□□□□ -2.65
SDC4P31431 RNU6-1281P-201ENST00000516223 105 ntBASIC-1.49□□□□□ -2.65
SDC4P31431 MIR5197-201ENST00000583721 112 ntBASIC-1.49□□□□□ -2.65
SDC4P31431 Y_RNA.634-201ENST00000364811 113 ntBASIC-1.5□□□□□ -2.65
SDC4P31431 Y_RNA.301-201ENST00000364990 103 ntBASIC-1.5□□□□□ -2.65
SDC4P31431 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.5□□□□□ -2.65
SDC4P31431 Y_RNA.785-201ENST00000384290 109 ntBASIC-1.5□□□□□ -2.65
SDC4P31431 MIR519A1-201ENST00000385257 85 ntBASIC-1.5□□□□□ -2.65
SDC4P31431 Y_RNA.582-201ENST00000391023 95 ntBASIC-1.5□□□□□ -2.65
SDC4P31431 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-1.5□□□□□ -2.65
SDC4P31431 RNU6-584P-201ENST00000410350 95 ntBASIC-1.5□□□□□ -2.65
SDC4P31431 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-1.5□□□□□ -2.65
SDC4P31431 RNU7-106P-201ENST00000459514 67 ntBASIC-1.5□□□□□ -2.65
SDC4P31431 RNU7-110P-201ENST00000516891 62 ntBASIC-1.5□□□□□ -2.65
SDC4P31431 AL121655.1-201ENST00000605811 308 ntBASIC-1.5□□□□□ -2.65
SDC4P31431 AC005014.3-201ENST00000605985 190 ntBASIC-1.5□□□□□ -2.65
SDC4P31431 PART1_1.1-201ENST00000611761 217 ntBASIC-1.5□□□□□ -2.65
SDC4P31431 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.51□□□□□ -2.65
SDC4P31431 RNU2-66P-201ENST00000410650 161 ntBASIC-1.51□□□□□ -2.65
SDC4P31431 RN7SKP19-201ENST00000516016 252 ntBASIC-1.51□□□□□ -2.65
SDC4P31431 Y_RNA.682-201ENST00000516457 100 ntBASIC-1.51□□□□□ -2.65
SDC4P31431 MIR3129-201ENST00000581095 76 ntBASIC-1.51□□□□□ -2.65
SDC4P31431 MIR4324-201ENST00000584846 72 ntBASIC-1.51□□□□□ -2.65
SDC4P31431 MIR367-201ENST00000362299 68 ntBASIC-1.52□□□□□ -2.65
SDC4P31431 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.52□□□□□ -2.65
SDC4P31431 Y_RNA.383-201ENST00000383855 97 ntBASIC-1.52□□□□□ -2.65
SDC4P31431 Y_RNA.390-201ENST00000383932 102 ntBASIC-1.52□□□□□ -2.65
SDC4P31431 RNY3P5-201ENST00000384127 102 ntBASIC-1.52□□□□□ -2.65
SDC4P31431 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.52□□□□□ -2.65
SDC4P31431 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.52□□□□□ -2.65
SDC4P31431 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-1.52□□□□□ -2.65
SDC4P31431 snoU13.19-201ENST00000459148 104 ntBASIC-1.52□□□□□ -2.65
SDC4P31431 Y_RNA.708-201ENST00000516950 96 ntBASIC-1.52□□□□□ -2.65
SDC4P31431 RNU6-1314P-201ENST00000517139 104 ntBASIC-1.52□□□□□ -2.65
SDC4P31431 AC007012.1-201ENST00000567192 175 ntBASIC-1.52□□□□□ -2.65
SDC4P31431 AL162413.1-201ENST00000603198 110 ntBASIC-1.52□□□□□ -2.65
SDC4P31431 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.53□□□□□ -2.65
SDC4P31431 SNORD114-10-201ENST00000363409 72 ntBASIC-1.53□□□□□ -2.65
SDC4P31431 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.53□□□□□ -2.65
SDC4P31431 RNU4-10P-201ENST00000364383 140 ntBASIC-1.53□□□□□ -2.65
SDC4P31431 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.53□□□□□ -2.65
SDC4P31431 snoU13.11-201ENST00000459219 104 ntBASIC-1.53□□□□□ -2.65
SDC4P31431 Y_RNA.655-201ENST00000515919 96 ntBASIC-1.53□□□□□ -2.65
SDC4P31431 RNU6-287P-201ENST00000516230 98 ntBASIC-1.53□□□□□ -2.65
SDC4P31431 RNU6-191P-201ENST00000516295 94 ntBASIC-1.53□□□□□ -2.65
SDC4P31431 MIR4724-201ENST00000579485 89 ntBASIC-1.53□□□□□ -2.65
SDC4P31431 AL050303.3-201ENST00000613704 284 ntBASIC-1.53□□□□□ -2.65
SDC4P31431 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.53□□□□□ -2.65
SDC4P31431 AC024614.3-201ENST00000637860 256 ntBASIC-1.53□□□□□ -2.65
SDC4P31431 RNY3P3-201ENST00000363816 102 ntBASIC-1.54□□□□□ -2.66
SDC4P31431 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.54□□□□□ -2.66
SDC4P31431 SNORD74.6-201ENST00000364796 70 ntBASIC-1.54□□□□□ -2.66
SDC4P31431 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.54□□□□□ -2.66
SDC4P31431 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.54□□□□□ -2.66
SDC4P31431 AL353813.1-201ENST00000440700 253 ntBASIC-1.54□□□□□ -2.66
SDC4P31431 AC013791.1-201ENST00000616619 62 ntBASIC-1.54□□□□□ -2.66
SDC4P31431 MIR6738-201ENST00000619620 64 ntBASIC-1.54□□□□□ -2.66
SDC4P31431 AL359880.1-201ENST00000621879 266 ntBASIC-1.54□□□□□ -2.66
SDC4P31431 Y_RNA.286-201ENST00000364813 102 ntBASIC-1.55□□□□□ -2.66
SDC4P31431 Y_RNA.359-201ENST00000365498 102 ntBASIC-1.55□□□□□ -2.66
SDC4P31431 MIR582-201ENST00000365731 98 ntBASIC-1.55□□□□□ -2.66
SDC4P31431 RNU6-484P-201ENST00000384016 107 ntBASIC-1.55□□□□□ -2.66
SDC4P31431 Y_RNA.572-201ENST00000384757 98 ntBASIC-1.55□□□□□ -2.66
SDC4P31431 Y_RNA.599-201ENST00000410489 109 ntBASIC-1.55□□□□□ -2.66
SDC4P31431 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.55□□□□□ -2.66
SDC4P31431 SERF1AP1-201ENST00000514575 187 ntBASIC-1.55□□□□□ -2.66
SDC4P31431 NBR2-204ENST00000587322 63 ntBASIC-1.55□□□□□ -2.66
SDC4P31431 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.56□□□□□ -2.66
SDC4P31431 RNU6-24P-201ENST00000384440 107 ntBASIC-1.56□□□□□ -2.66
SDC4P31431 RNU6-30P-201ENST00000384561 107 ntBASIC-1.56□□□□□ -2.66
SDC4P31431 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.56□□□□□ -2.66
SDC4P31431 Y_RNA.577-201ENST00000384794 101 ntBASIC-1.56□□□□□ -2.66
SDC4P31431 MIR548I2-201ENST00000408348 149 ntBASIC-1.56□□□□□ -2.66
SDC4P31431 RNU7-113P-201ENST00000459273 62 ntBASIC-1.56□□□□□ -2.66
SDC4P31431 MIR1270-201ENST00000459320 83 ntBASIC-1.56□□□□□ -2.66
SDC4P31431 RPS29P25-201ENST00000481709 171 ntBASIC-1.56□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms