Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 Y_RNA.559-201ENST00000384686 107 ntBASIC-0.82□□□□□ -2.54
CD40LGP29965 MIR626-201ENST00000385032 94 ntBASIC-0.82□□□□□ -2.54
CD40LGP29965 MIR204-201ENST00000385200 110 ntBASIC-0.82□□□□□ -2.54
CD40LGP29965 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.82□□□□□ -2.54
CD40LGP29965 snoU13.13-201ENST00000458842 104 ntBASIC-0.82□□□□□ -2.54
CD40LGP29965 AC074198.2-201ENST00000508153 258 ntBASIC-0.82□□□□□ -2.54
CD40LGP29965 Y_RNA.655-201ENST00000515919 96 ntBASIC-0.82□□□□□ -2.54
CD40LGP29965 MIR4724-201ENST00000579485 89 ntBASIC-0.82□□□□□ -2.54
CD40LGP29965 MIR4499-201ENST00000584834 69 ntBASIC-0.82□□□□□ -2.54
CD40LGP29965 AC013791.1-201ENST00000616619 62 ntBASIC-0.82□□□□□ -2.54
CD40LGP29965 MIR376A2-201ENST00000636782 80 ntBASIC-0.82□□□□□ -2.54
CD40LGP29965 MIR6841-201ENST00000637129 72 ntBASIC-0.82□□□□□ -2.54
CD40LGP29965 SNORA22.1-201ENST00000362701 134 ntBASIC-0.83□□□□□ -2.54
CD40LGP29965 RNU6-1188P-201ENST00000363795 107 ntBASIC-0.83□□□□□ -2.54
CD40LGP29965 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.83□□□□□ -2.54
CD40LGP29965 Y_RNA.453-201ENST00000384223 109 ntBASIC-0.83□□□□□ -2.54
CD40LGP29965 SNORD116-1-201ENST00000384335 95 ntBASIC-0.83□□□□□ -2.54
CD40LGP29965 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-0.83□□□□□ -2.54
CD40LGP29965 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC-0.83□□□□□ -2.54
CD40LGP29965 AC098614.3-201ENST00000438957 440 ntBASIC-0.83□□□□□ -2.54
CD40LGP29965 MTND1P29-201ENST00000448112 647 ntBASIC-0.83□□□□□ -2.54
CD40LGP29965 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.83□□□□□ -2.54
CD40LGP29965 RNU7-55P-201ENST00000459426 62 ntBASIC-0.83□□□□□ -2.54
CD40LGP29965 AC021146.6-201ENST00000514659 117 ntBASIC-0.83□□□□□ -2.54
CD40LGP29965 RNU6-764P-201ENST00000516396 105 ntBASIC-0.83□□□□□ -2.54
CD40LGP29965 RNA5SP395-201ENST00000516567 118 ntBASIC-0.83□□□□□ -2.54
CD40LGP29965 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.83□□□□□ -2.54
CD40LGP29965 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC-0.83□□□□□ -2.54
CD40LGP29965 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.83□□□□□ -2.54
CD40LGP29965 AC103591.3-201ENST00000608684 209 ntBASIC-0.83□□□□□ -2.54
CD40LGP29965 MTND5P18-201ENST00000445624 1801 ntBASIC-0.83□□□□□ -2.54
CD40LGP29965 RNU6-431P-201ENST00000383874 107 ntBASIC-0.84□□□□□ -2.54
CD40LGP29965 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.84□□□□□ -2.54
CD40LGP29965 SNORA20-201ENST00000384662 132 ntBASIC-0.84□□□□□ -2.54
CD40LGP29965 RNU6-370P-201ENST00000411008 104 ntBASIC-0.84□□□□□ -2.54
CD40LGP29965 RNU7-80P-201ENST00000459562 61 ntBASIC-0.84□□□□□ -2.54
CD40LGP29965 MTND4P17-201ENST00000470444 350 ntBASIC-0.84□□□□□ -2.54
CD40LGP29965 TRAJ51-201ENST00000504127 63 ntBASIC-0.84□□□□□ -2.54
CD40LGP29965 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.84□□□□□ -2.54
CD40LGP29965 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.84□□□□□ -2.54
CD40LGP29965 AC108676.2-201ENST00000605225 163 ntBASIC-0.84□□□□□ -2.54
CD40LGP29965 AC011603.4-201ENST00000611325 277 ntBASIC-0.84□□□□□ -2.54
CD40LGP29965 MIR8068-201ENST00000618032 68 ntBASIC-0.84□□□□□ -2.54
CD40LGP29965 AC091932.4-201ENST00000623386 200 ntBASIC-0.84□□□□□ -2.54
CD40LGP29965 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.85□□□□□ -2.55
CD40LGP29965 Y_RNA.143-201ENST00000363520 106 ntBASIC-0.85□□□□□ -2.55
CD40LGP29965 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.85□□□□□ -2.55
CD40LGP29965 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.85□□□□□ -2.55
CD40LGP29965 RNU6-449P-201ENST00000383914 107 ntBASIC-0.85□□□□□ -2.55
CD40LGP29965 Y_RNA.418-201ENST00000384029 102 ntBASIC-0.85□□□□□ -2.55
CD40LGP29965 MTND1P34-201ENST00000438556 671 ntBASIC-0.85□□□□□ -2.55
CD40LGP29965 AC099799.1-201ENST00000439809 192 ntBASIC-0.85□□□□□ -2.55
CD40LGP29965 RNA5SP470-201ENST00000516463 106 ntBASIC-0.85□□□□□ -2.55
CD40LGP29965 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.85□□□□□ -2.55
CD40LGP29965 AP000676.1-201ENST00000533307 52 ntBASIC-0.85□□□□□ -2.55
CD40LGP29965 YWHAEP2-201ENST00000580066 112 ntBASIC-0.85□□□□□ -2.55
CD40LGP29965 MIR5704-201ENST00000584029 77 ntBASIC-0.85□□□□□ -2.55
CD40LGP29965 uc_338.10-201ENST00000621872 182 ntBASIC-0.85□□□□□ -2.55
CD40LGP29965 AP000770.2-201ENST00000623694 100 ntBASIC-0.85□□□□□ -2.55
CD40LGP29965 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.86□□□□□ -2.55
CD40LGP29965 Y_RNA.454-201ENST00000384224 113 ntBASIC-0.86□□□□□ -2.55
CD40LGP29965 MIR517B-201ENST00000385102 67 ntBASIC-0.86□□□□□ -2.55
CD40LGP29965 SNORD64-201ENST00000386683 67 ntBASIC-0.86□□□□□ -2.55
CD40LGP29965 SCARNA18B-201ENST00000458806 135 ntBASIC-0.86□□□□□ -2.55
CD40LGP29965 SEPT14P8-201ENST00000508026 178 ntBASIC-0.86□□□□□ -2.55
CD40LGP29965 RNU6-138P-201ENST00000515952 107 ntBASIC-0.86□□□□□ -2.55
CD40LGP29965 RNU7-79P-201ENST00000516082 62 ntBASIC-0.86□□□□□ -2.55
CD40LGP29965 SNORD22.1-201ENST00000516331 125 ntBASIC-0.86□□□□□ -2.55
CD40LGP29965 RNU7-30P-201ENST00000516835 62 ntBASIC-0.86□□□□□ -2.55
CD40LGP29965 MIR5692C2-201ENST00000577959 77 ntBASIC-0.86□□□□□ -2.55
CD40LGP29965 MIR3179-1-201ENST00000578940 84 ntBASIC-0.86□□□□□ -2.55
CD40LGP29965 MIR3179-2-201ENST00000579107 84 ntBASIC-0.86□□□□□ -2.55
CD40LGP29965 MIR3179-3-201ENST00000579566 84 ntBASIC-0.86□□□□□ -2.55
CD40LGP29965 MIR5690-201ENST00000583739 73 ntBASIC-0.86□□□□□ -2.55
CD40LGP29965 DLEU2_2.2-201ENST00000615474 90 ntBASIC-0.86□□□□□ -2.55
CD40LGP29965 uc_338.19-201ENST00000616808 99 ntBASIC-0.86□□□□□ -2.55
CD40LGP29965 MIR3179-4-201ENST00000617599 84 ntBASIC-0.86□□□□□ -2.55
CD40LGP29965 U6.109-201ENST00000636749 87 ntBASIC-0.86□□□□□ -2.55
CD40LGP29965 MIR3688-2-201ENST00000636963 87 ntBASIC-0.86□□□□□ -2.55
CD40LGP29965 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.87□□□□□ -2.55
CD40LGP29965 RNU6-154P-201ENST00000384306 106 ntBASIC-0.87□□□□□ -2.55
CD40LGP29965 MIR519E-201ENST00000385075 84 ntBASIC-0.87□□□□□ -2.55
CD40LGP29965 SPINT5P-201ENST00000448174 155 ntBASIC-0.87□□□□□ -2.55
CD40LGP29965 MRPS35P2-201ENST00000508242 191 ntBASIC-0.87□□□□□ -2.55
CD40LGP29965 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-0.87□□□□□ -2.55
CD40LGP29965 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.87□□□□□ -2.55
CD40LGP29965 MIR378F-201ENST00000578143 78 ntBASIC-0.87□□□□□ -2.55
CD40LGP29965 AL121655.1-201ENST00000605811 308 ntBASIC-0.87□□□□□ -2.55
CD40LGP29965 SNORD113-5-201ENST00000607261 78 ntBASIC-0.87□□□□□ -2.55
CD40LGP29965 AC069503.3-201ENST00000618674 145 ntBASIC-0.87□□□□□ -2.55
CD40LGP29965 AC021613.1-201ENST00000623880 111 ntBASIC-0.87□□□□□ -2.55
CD40LGP29965 SNORD114-29-201ENST00000364819 70 ntBASIC-0.88□□□□□ -2.55
CD40LGP29965 Y_RNA.293-201ENST00000364908 93 ntBASIC-0.88□□□□□ -2.55
CD40LGP29965 SNORD115-35-201ENST00000365122 82 ntBASIC-0.88□□□□□ -2.55
CD40LGP29965 Y_RNA.439-201ENST00000384119 94 ntBASIC-0.88□□□□□ -2.55
CD40LGP29965 MIR599-201ENST00000385069 95 ntBASIC-0.88□□□□□ -2.55
CD40LGP29965 MIR559-201ENST00000385188 96 ntBASIC-0.88□□□□□ -2.55
CD40LGP29965 Y_RNA.635-201ENST00000459041 101 ntBASIC-0.88□□□□□ -2.55
CD40LGP29965 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.88□□□□□ -2.55
CD40LGP29965 RNU6-699P-201ENST00000517081 110 ntBASIC-0.88□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 319 ms