Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 Y_RNA.60-201ENST00000362831 98 ntBASIC0.52□□□□□ -2.33
PTPN4P29074 RNA5SP499-201ENST00000363982 119 ntBASIC0.52□□□□□ -2.33
PTPN4P29074 Y_RNA.571-201ENST00000384753 98 ntBASIC0.52□□□□□ -2.33
PTPN4P29074 MIR573-201ENST00000384964 99 ntBASIC0.52□□□□□ -2.33
PTPN4P29074 MIR520H-201ENST00000385126 88 ntBASIC0.52□□□□□ -2.33
PTPN4P29074 AC098934.3-201ENST00000430450 190 ntBASIC0.52□□□□□ -2.33
PTPN4P29074 Y_RNA.797-201ENST00000515977 94 ntBASIC0.52□□□□□ -2.33
PTPN4P29074 MIR1273G-201ENST00000577677 100 ntBASIC0.52□□□□□ -2.33
PTPN4P29074 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
PTPN4P29074 Y_RNA.454-201ENST00000384224 113 ntBASIC0.51□□□□□ -2.33
PTPN4P29074 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.51□□□□□ -2.33
PTPN4P29074 RNU7-56P-201ENST00000458744 62 ntBASIC0.51□□□□□ -2.33
PTPN4P29074 RNU6-1023P-201ENST00000516137 106 ntBASIC0.51□□□□□ -2.33
PTPN4P29074 RNU4-71P-201ENST00000516258 113 ntBASIC0.51□□□□□ -2.33
PTPN4P29074 RNU6-229P-201ENST00000516614 102 ntBASIC0.51□□□□□ -2.33
PTPN4P29074 MIR4503-201ENST00000582187 83 ntBASIC0.51□□□□□ -2.33
PTPN4P29074 MIR5087-201ENST00000635826 76 ntBASIC0.51□□□□□ -2.33
PTPN4P29074 AC099654.10-201ENST00000640395 161 ntBASIC0.51□□□□□ -2.33
PTPN4P29074 AL596211.1-201ENST00000569873 2277 ntBASIC0.5□□□□□ -2.33
PTPN4P29074 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
PTPN4P29074 MIR30D-201ENST00000362283 70 ntBASIC0.5□□□□□ -2.33
PTPN4P29074 Y_RNA.182-201ENST00000363880 111 ntBASIC0.5□□□□□ -2.33
PTPN4P29074 RNU6-702P-201ENST00000364982 107 ntBASIC0.5□□□□□ -2.33
PTPN4P29074 RNU6-643P-201ENST00000384018 107 ntBASIC0.5□□□□□ -2.33
PTPN4P29074 Y_RNA.447-201ENST00000384184 113 ntBASIC0.5□□□□□ -2.33
PTPN4P29074 RNA5SP261-201ENST00000410536 106 ntBASIC0.5□□□□□ -2.33
PTPN4P29074 RNA5SP222-201ENST00000411039 105 ntBASIC0.5□□□□□ -2.33
PTPN4P29074 SEPT7P4-201ENST00000437076 306 ntBASIC0.5□□□□□ -2.33
PTPN4P29074 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.5□□□□□ -2.33
PTPN4P29074 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
PTPN4P29074 Y_RNA.193-201ENST00000363979 102 ntBASIC0.49□□□□□ -2.33
PTPN4P29074 RNY1P8-201ENST00000383970 114 ntBASIC0.49□□□□□ -2.33
PTPN4P29074 Y_RNA.430-201ENST00000384081 110 ntBASIC0.49□□□□□ -2.33
PTPN4P29074 RNU6-196P-201ENST00000384315 107 ntBASIC0.49□□□□□ -2.33
PTPN4P29074 RNU4-70P-201ENST00000384579 139 ntBASIC0.49□□□□□ -2.33
PTPN4P29074 MIR624-201ENST00000385217 97 ntBASIC0.49□□□□□ -2.33
PTPN4P29074 MT-TF-201ENST00000387314 71 ntBASIC0.49□□□□□ -2.33
PTPN4P29074 RNU6-1319P-201ENST00000390855 104 ntBASIC0.49□□□□□ -2.33
PTPN4P29074 RNU6-747P-201ENST00000390928 104 ntBASIC0.49□□□□□ -2.33
PTPN4P29074 RNU6-241P-201ENST00000391148 104 ntBASIC0.49□□□□□ -2.33
PTPN4P29074 MIR938-201ENST00000401216 83 ntBASIC0.49□□□□□ -2.33
PTPN4P29074 RNA5SP127-201ENST00000411051 133 ntBASIC0.49□□□□□ -2.33
PTPN4P29074 RNU6-177P-201ENST00000411257 104 ntBASIC0.49□□□□□ -2.33
PTPN4P29074 RNU7-185P-201ENST00000459215 60 ntBASIC0.49□□□□□ -2.33
PTPN4P29074 RN7SKP12-201ENST00000516275 143 ntBASIC0.49□□□□□ -2.33
PTPN4P29074 SCARNA15-202ENST00000516881 127 ntBASIC0.49□□□□□ -2.33
PTPN4P29074 RNU6-111P-201ENST00000517179 105 ntBASIC0.49□□□□□ -2.33
PTPN4P29074 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.49□□□□□ -2.33
PTPN4P29074 SNORA20.1-201ENST00000364790 130 ntBASIC0.48□□□□□ -2.33
PTPN4P29074 RNU6-275P-201ENST00000364910 107 ntBASIC0.48□□□□□ -2.33
PTPN4P29074 Y_RNA.307-201ENST00000365022 117 ntBASIC0.48□□□□□ -2.33
PTPN4P29074 RNU6-945P-201ENST00000383947 107 ntBASIC0.48□□□□□ -2.33
PTPN4P29074 Y_RNA.452-201ENST00000384202 108 ntBASIC0.48□□□□□ -2.33
PTPN4P29074 MIR125B2-201ENST00000385128 89 ntBASIC0.48□□□□□ -2.33
PTPN4P29074 MIR1257-201ENST00000408490 117 ntBASIC0.48□□□□□ -2.33
PTPN4P29074 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.48□□□□□ -2.33
PTPN4P29074 MIR6841-201ENST00000637129 72 ntBASIC0.48□□□□□ -2.33
PTPN4P29074 Y_RNA.75-201ENST00000362927 97 ntBASIC0.47□□□□□ -2.33
PTPN4P29074 RNU6-597P-201ENST00000365620 102 ntBASIC0.47□□□□□ -2.33
PTPN4P29074 Y_RNA.412-201ENST00000384001 104 ntBASIC0.47□□□□□ -2.33
PTPN4P29074 SNORA36.2-201ENST00000384004 127 ntBASIC0.47□□□□□ -2.33
PTPN4P29074 RNU6-574P-201ENST00000384265 107 ntBASIC0.47□□□□□ -2.33
PTPN4P29074 RNU6-1237P-201ENST00000384777 107 ntBASIC0.47□□□□□ -2.33
PTPN4P29074 AC114737.2-201ENST00000421583 173 ntBASIC0.47□□□□□ -2.33
PTPN4P29074 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.47□□□□□ -2.33
PTPN4P29074 MIR3612-201ENST00000579753 87 ntBASIC0.47□□□□□ -2.33
PTPN4P29074 MIR3149-201ENST00000584629 83 ntBASIC0.47□□□□□ -2.33
PTPN4P29074 U6.106-201ENST00000636360 105 ntBASIC0.47□□□□□ -2.33
PTPN4P29074 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
PTPN4P29074 MIR140-201ENST00000385282 100 ntBASIC0.46□□□□□ -2.34
PTPN4P29074 RNU6-918P-201ENST00000391219 106 ntBASIC0.46□□□□□ -2.34
PTPN4P29074 RNU6-1149P-201ENST00000516810 97 ntBASIC0.46□□□□□ -2.34
PTPN4P29074 RNU7-70P-201ENST00000516941 66 ntBASIC0.46□□□□□ -2.34
PTPN4P29074 MRPS18CP4-201ENST00000535821 231 ntBASIC0.46□□□□□ -2.34
PTPN4P29074 MIR3152-201ENST00000579801 74 ntBASIC0.46□□□□□ -2.34
PTPN4P29074 SNORD92-201ENST00000585078 85 ntBASIC0.46□□□□□ -2.34
PTPN4P29074 AC008608.1-201ENST00000603910 127 ntBASIC0.46□□□□□ -2.34
PTPN4P29074 AC021613.1-201ENST00000623880 111 ntBASIC0.46□□□□□ -2.34
PTPN4P29074 MIR18A-201ENST00000362310 71 ntBASIC0.45□□□□□ -2.34
PTPN4P29074 Y_RNA.435-201ENST00000384095 112 ntBASIC0.45□□□□□ -2.34
PTPN4P29074 RNU6-364P-201ENST00000384387 107 ntBASIC0.45□□□□□ -2.34
PTPN4P29074 SNORA20-201ENST00000384662 132 ntBASIC0.45□□□□□ -2.34
PTPN4P29074 RNU7-102P-201ENST00000458948 62 ntBASIC0.45□□□□□ -2.34
PTPN4P29074 RNU7-156P-201ENST00000517214 74 ntBASIC0.45□□□□□ -2.34
PTPN4P29074 AC090897.1-201ENST00000580909 226 ntBASIC0.45□□□□□ -2.34
PTPN4P29074 AL353621.2-201ENST00000605340 133 ntBASIC0.45□□□□□ -2.34
PTPN4P29074 AC243829.6-201ENST00000612652 106 ntBASIC0.45□□□□□ -2.34
PTPN4P29074 AL662814.1-201ENST00000617364 121 ntBASIC0.45□□□□□ -2.34
PTPN4P29074 MIR924-201ENST00000638017 53 ntBASIC0.45□□□□□ -2.34
PTPN4P29074 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.45□□□□□ -2.34
PTPN4P29074 MIR411-201ENST00000362239 96 ntBASIC0.44□□□□□ -2.34
PTPN4P29074 Y_RNA.200-201ENST00000364018 102 ntBASIC0.44□□□□□ -2.34
PTPN4P29074 SNORA25.7-201ENST00000364375 127 ntBASIC0.44□□□□□ -2.34
PTPN4P29074 RNU6-463P-201ENST00000384340 107 ntBASIC0.44□□□□□ -2.34
PTPN4P29074 RNU6-447P-201ENST00000410293 104 ntBASIC0.44□□□□□ -2.34
PTPN4P29074 RNU6-1118P-201ENST00000410382 104 ntBASIC0.44□□□□□ -2.34
PTPN4P29074 RNU6-1076P-201ENST00000410397 104 ntBASIC0.44□□□□□ -2.34
PTPN4P29074 RNU6-355P-201ENST00000410427 104 ntBASIC0.44□□□□□ -2.34
PTPN4P29074 RNU6-791P-201ENST00000410467 104 ntBASIC0.44□□□□□ -2.34
PTPN4P29074 RNU6-705P-201ENST00000410601 104 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 179.5 ms