Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 SNORA16.1-201ENST00000364597 132 ntBASIC1.56□□□□□ -2.16
CD40P25942 RNA5SP95-201ENST00000410319 137 ntBASIC1.56□□□□□ -2.16
CD40P25942 RNU4-69P-201ENST00000410677 143 ntBASIC1.56□□□□□ -2.16
CD40P25942 MIR4264-201ENST00000583520 66 ntBASIC1.56□□□□□ -2.16
CD40P25942 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
CD40P25942 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
CD40P25942 Y_RNA.299-201ENST00000364973 94 ntBASIC1.55□□□□□ -2.16
CD40P25942 Y_RNA.330-201ENST00000365230 109 ntBASIC1.55□□□□□ -2.16
CD40P25942 Y_RNA.363-201ENST00000365529 113 ntBASIC1.55□□□□□ -2.16
CD40P25942 SNORD116-21-201ENST00000384507 92 ntBASIC1.55□□□□□ -2.16
CD40P25942 SNORA75.2-201ENST00000391138 150 ntBASIC1.55□□□□□ -2.16
CD40P25942 SNORA75.3-201ENST00000391231 150 ntBASIC1.55□□□□□ -2.16
CD40P25942 RNU6-613P-201ENST00000410412 108 ntBASIC1.55□□□□□ -2.16
CD40P25942 RPS29P11-201ENST00000496507 171 ntBASIC1.55□□□□□ -2.16
CD40P25942 SNORA25.15-201ENST00000516487 89 ntBASIC1.55□□□□□ -2.16
CD40P25942 RNY4P6-201ENST00000363667 96 ntBASIC1.54□□□□□ -2.16
CD40P25942 RNU6-429P-201ENST00000384582 108 ntBASIC1.54□□□□□ -2.16
CD40P25942 MT-TN-201ENST00000387400 73 ntBASIC1.54□□□□□ -2.16
CD40P25942 RNU6-910P-201ENST00000390844 107 ntBASIC1.54□□□□□ -2.16
CD40P25942 AC007012.1-201ENST00000567192 175 ntBASIC1.54□□□□□ -2.16
CD40P25942 SEPT14P17-201ENST00000617978 177 ntBASIC1.54□□□□□ -2.16
CD40P25942 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.54□□□□□ -2.16
CD40P25942 RNU1-17P-201ENST00000363022 152 ntBASIC1.53□□□□□ -2.16
CD40P25942 RNU6-1325P-201ENST00000364905 105 ntBASIC1.53□□□□□ -2.16
CD40P25942 MIR588-201ENST00000384900 83 ntBASIC1.53□□□□□ -2.16
CD40P25942 SUMO2P12-201ENST00000405924 140 ntBASIC1.53□□□□□ -2.16
CD40P25942 RNA5SP237-201ENST00000410414 113 ntBASIC1.53□□□□□ -2.16
CD40P25942 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.53□□□□□ -2.16
CD40P25942 AL391516.1-201ENST00000554380 2449 ntBASIC1.53□□□□□ -2.16
CD40P25942 MIR8081-201ENST00000611533 95 ntBASIC1.53□□□□□ -2.16
CD40P25942 Y_RNA.35-201ENST00000362601 101 ntBASIC1.52□□□□□ -2.17
CD40P25942 SNORD20-201ENST00000384550 80 ntBASIC1.52□□□□□ -2.17
CD40P25942 MIR548D2-201ENST00000384955 97 ntBASIC1.52□□□□□ -2.17
CD40P25942 RNU7-62P-201ENST00000458856 62 ntBASIC1.52□□□□□ -2.17
CD40P25942 snoU13.2-201ENST00000459201 104 ntBASIC1.52□□□□□ -2.17
CD40P25942 MIR1270-201ENST00000459320 83 ntBASIC1.52□□□□□ -2.17
CD40P25942 MIR4448-201ENST00000584360 86 ntBASIC1.52□□□□□ -2.17
CD40P25942 MIR6740-201ENST00000618268 113 ntBASIC1.52□□□□□ -2.17
CD40P25942 uc_338.20-201ENST00000621563 178 ntBASIC1.52□□□□□ -2.17
CD40P25942 RNA5SP190-201ENST00000365222 118 ntBASIC1.51□□□□□ -2.17
CD40P25942 RNU6-880P-201ENST00000384526 107 ntBASIC1.51□□□□□ -2.17
CD40P25942 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.51□□□□□ -2.17
CD40P25942 SNORD77B-201ENST00000391112 67 ntBASIC1.51□□□□□ -2.17
CD40P25942 MIR4419B-201ENST00000577260 68 ntBASIC1.51□□□□□ -2.17
CD40P25942 MIR502-201ENST00000606349 86 ntBASIC1.51□□□□□ -2.17
CD40P25942 AC087741.2-201ENST00000619415 172 ntBASIC1.51□□□□□ -2.17
CD40P25942 AL035470.1-201ENST00000622571 220 ntBASIC1.51□□□□□ -2.17
CD40P25942 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.51□□□□□ -2.17
CD40P25942 MIR377-201ENST00000362145 69 ntBASIC1.5□□□□□ -2.17
CD40P25942 Y_RNA.344-201ENST00000365381 112 ntBASIC1.5□□□□□ -2.17
CD40P25942 Y_RNA.362-201ENST00000365518 110 ntBASIC1.5□□□□□ -2.17
CD40P25942 SNORA2B-201ENST00000384583 137 ntBASIC1.5□□□□□ -2.17
CD40P25942 Y_RNA.549-201ENST00000384657 102 ntBASIC1.5□□□□□ -2.17
CD40P25942 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.5□□□□□ -2.17
CD40P25942 RNU6-1086P-201ENST00000410930 100 ntBASIC1.5□□□□□ -2.17
CD40P25942 AL591704.2-201ENST00000421658 181 ntBASIC1.5□□□□□ -2.17
CD40P25942 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.5□□□□□ -2.17
CD40P25942 RNU7-35P-201ENST00000517174 62 ntBASIC1.5□□□□□ -2.17
CD40P25942 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CD40P25942 RNU6-215P-201ENST00000365169 102 ntBASIC1.49□□□□□ -2.17
CD40P25942 SNORA80D-201ENST00000384488 135 ntBASIC1.49□□□□□ -2.17
CD40P25942 RNU7-79P-201ENST00000516082 62 ntBASIC1.49□□□□□ -2.17
CD40P25942 SNORA70.22-201ENST00000517160 124 ntBASIC1.49□□□□□ -2.17
CD40P25942 AC141846.1-201ENST00000568348 142 ntBASIC1.49□□□□□ -2.17
CD40P25942 MIR4255-201ENST00000579351 72 ntBASIC1.49□□□□□ -2.17
CD40P25942 MIR3618-201ENST00000580330 88 ntBASIC1.49□□□□□ -2.17
CD40P25942 AL662814.1-201ENST00000617364 121 ntBASIC1.49□□□□□ -2.17
CD40P25942 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
CD40P25942 RNA5SP327-201ENST00000362494 101 ntBASIC1.48□□□□□ -2.17
CD40P25942 SNORA63.5-201ENST00000363548 123 ntBASIC1.48□□□□□ -2.17
CD40P25942 RNU6-616P-201ENST00000384353 107 ntBASIC1.48□□□□□ -2.17
CD40P25942 MIR222-201ENST00000384992 110 ntBASIC1.48□□□□□ -2.17
CD40P25942 RNU6-1165P-201ENST00000410119 107 ntBASIC1.48□□□□□ -2.17
CD40P25942 MRPL35P3-201ENST00000421557 364 ntBASIC1.48□□□□□ -2.17
CD40P25942 SNORD13-201ENST00000459299 104 ntBASIC1.48□□□□□ -2.17
CD40P25942 RNU7-21P-201ENST00000459430 62 ntBASIC1.48□□□□□ -2.17
CD40P25942 SNORD79.1-201ENST00000516069 84 ntBASIC1.48□□□□□ -2.17
CD40P25942 RNU6-970P-201ENST00000516312 107 ntBASIC1.48□□□□□ -2.17
CD40P25942 AC023827.1-201ENST00000569247 97 ntBASIC1.48□□□□□ -2.17
CD40P25942 Y_RNA.773-201ENST00000607168 90 ntBASIC1.48□□□□□ -2.17
CD40P25942 uc_338.6-201ENST00000613544 171 ntBASIC1.48□□□□□ -2.17
CD40P25942 SNORD115-19-201ENST00000363098 82 ntBASIC1.47□□□□□ -2.17
CD40P25942 SNORD115-18-201ENST00000363293 82 ntBASIC1.47□□□□□ -2.17
CD40P25942 Y_RNA.168-201ENST00000363740 102 ntBASIC1.47□□□□□ -2.17
CD40P25942 SNORD115-17-201ENST00000364612 82 ntBASIC1.47□□□□□ -2.17
CD40P25942 MIR563-201ENST00000385080 79 ntBASIC1.47□□□□□ -2.17
CD40P25942 RNA5SP458-201ENST00000516188 119 ntBASIC1.47□□□□□ -2.17
CD40P25942 RNU6-589P-201ENST00000516485 107 ntBASIC1.47□□□□□ -2.17
CD40P25942 MIR4679-2-201ENST00000578358 77 ntBASIC1.47□□□□□ -2.17
CD40P25942 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.47□□□□□ -2.17
CD40P25942 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.47□□□□□ -2.17
CD40P25942 AL589743.1-201ENST00000551932 2712 ntBASIC1.47□□□□□ -2.17
CD40P25942 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CD40P25942 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CD40P25942 RNY1P13-201ENST00000365030 105 ntBASIC1.46□□□□□ -2.18
CD40P25942 RNU6-580P-201ENST00000365159 107 ntBASIC1.46□□□□□ -2.18
CD40P25942 RNU1-98P-201ENST00000458992 160 ntBASIC1.46□□□□□ -2.18
CD40P25942 Y_RNA.709-201ENST00000516952 92 ntBASIC1.46□□□□□ -2.18
CD40P25942 AC036111.3-201ENST00000526389 112 ntBASIC1.46□□□□□ -2.18
CD40P25942 FAM71BP1-201ENST00000604431 523 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms