Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 MIR6759-201ENST00000638110 65 ntBASIC0.59□□□□□ -2.31
COL5A1P20908 MIR302B-201ENST00000362188 73 ntBASIC0.59□□□□□ -2.32
COL5A1P20908 RNU6-1319P-201ENST00000390855 104 ntBASIC0.59□□□□□ -2.32
COL5A1P20908 RNU6-747P-201ENST00000390928 104 ntBASIC0.59□□□□□ -2.32
COL5A1P20908 RNU6-241P-201ENST00000391148 104 ntBASIC0.59□□□□□ -2.32
COL5A1P20908 RNA5SP63-201ENST00000391225 112 ntBASIC0.59□□□□□ -2.32
COL5A1P20908 RNU6-177P-201ENST00000411257 104 ntBASIC0.59□□□□□ -2.32
COL5A1P20908 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.59□□□□□ -2.32
COL5A1P20908 RPS26P48-201ENST00000491713 339 ntBASIC0.59□□□□□ -2.32
COL5A1P20908 RNU7-41P-201ENST00000515917 61 ntBASIC0.59□□□□□ -2.32
COL5A1P20908 RNU6-830P-201ENST00000516353 107 ntBASIC0.59□□□□□ -2.32
COL5A1P20908 MTND5P41-201ENST00000517498 206 ntBASIC0.59□□□□□ -2.32
COL5A1P20908 MIR4778-201ENST00000577635 80 ntBASIC0.59□□□□□ -2.32
COL5A1P20908 MIR3152-201ENST00000579801 74 ntBASIC0.59□□□□□ -2.32
COL5A1P20908 AC104465.1-201ENST00000611365 139 ntBASIC0.59□□□□□ -2.32
COL5A1P20908 AC015726.2-201ENST00000620112 122 ntBASIC0.59□□□□□ -2.32
COL5A1P20908 Y_RNA.778-201ENST00000620203 90 ntBASIC0.59□□□□□ -2.32
COL5A1P20908 AC091932.4-201ENST00000623386 200 ntBASIC0.59□□□□□ -2.32
COL5A1P20908 AC021753.1-201ENST00000635724 168 ntBASIC0.59□□□□□ -2.32
COL5A1P20908 RNU1-36P-201ENST00000365130 165 ntBASIC0.58□□□□□ -2.32
COL5A1P20908 SNORD50.2-201ENST00000365465 70 ntBASIC0.58□□□□□ -2.32
COL5A1P20908 SNORD18B-201ENST00000365659 72 ntBASIC0.58□□□□□ -2.32
COL5A1P20908 RNU6-1336P-201ENST00000383886 109 ntBASIC0.58□□□□□ -2.32
COL5A1P20908 RNU6-439P-201ENST00000384188 106 ntBASIC0.58□□□□□ -2.32
COL5A1P20908 RNU6-886P-201ENST00000384319 105 ntBASIC0.58□□□□□ -2.32
COL5A1P20908 MIR802-201ENST00000390235 94 ntBASIC0.58□□□□□ -2.32
COL5A1P20908 RNU6-910P-201ENST00000390844 107 ntBASIC0.58□□□□□ -2.32
COL5A1P20908 SNORA26.6-201ENST00000391256 115 ntBASIC0.58□□□□□ -2.32
COL5A1P20908 RNU6-733P-201ENST00000410759 104 ntBASIC0.58□□□□□ -2.32
COL5A1P20908 RNU6-426P-201ENST00000516464 97 ntBASIC0.58□□□□□ -2.32
COL5A1P20908 MIR3664-201ENST00000579074 99 ntBASIC0.58□□□□□ -2.32
COL5A1P20908 MIR4264-201ENST00000583520 66 ntBASIC0.58□□□□□ -2.32
COL5A1P20908 AC023932.2-201ENST00000603176 175 ntBASIC0.58□□□□□ -2.32
COL5A1P20908 MIR3658-201ENST00000636291 56 ntBASIC0.58□□□□□ -2.32
COL5A1P20908 SNORA25.3-201ENST00000363205 127 ntBASIC0.57□□□□□ -2.32
COL5A1P20908 Y_RNA.241-201ENST00000364470 117 ntBASIC0.57□□□□□ -2.32
COL5A1P20908 Y_RNA.580-201ENST00000391004 95 ntBASIC0.57□□□□□ -2.32
COL5A1P20908 SNORA75.5-201ENST00000391291 81 ntBASIC0.57□□□□□ -2.32
COL5A1P20908 MIR1302-7-201ENST00000408841 72 ntBASIC0.57□□□□□ -2.32
COL5A1P20908 RNU6-938P-201ENST00000411285 103 ntBASIC0.57□□□□□ -2.32
COL5A1P20908 RNU7-67P-201ENST00000459003 62 ntBASIC0.57□□□□□ -2.32
COL5A1P20908 AC113410.1-201ENST00000505029 247 ntBASIC0.57□□□□□ -2.32
COL5A1P20908 RN7SKP19-201ENST00000516016 252 ntBASIC0.57□□□□□ -2.32
COL5A1P20908 RNU7-70P-201ENST00000516941 66 ntBASIC0.57□□□□□ -2.32
COL5A1P20908 RNU2-60P-201ENST00000517290 128 ntBASIC0.57□□□□□ -2.32
COL5A1P20908 MIR4636-201ENST00000582271 80 ntBASIC0.57□□□□□ -2.32
COL5A1P20908 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.57□□□□□ -2.32
COL5A1P20908 Y_RNA.52-201ENST00000362760 96 ntBASIC0.57□□□□□ -2.32
COL5A1P20908 Y_RNA.299-201ENST00000364973 94 ntBASIC0.57□□□□□ -2.32
COL5A1P20908 RNY1P6-201ENST00000384193 109 ntBASIC0.57□□□□□ -2.32
COL5A1P20908 Y_RNA.542-201ENST00000384641 111 ntBASIC0.57□□□□□ -2.32
COL5A1P20908 SNORD38B-201ENST00000384690 67 ntBASIC0.57□□□□□ -2.32
COL5A1P20908 snoU13.21-201ENST00000459368 105 ntBASIC0.57□□□□□ -2.32
COL5A1P20908 RNU7-80P-201ENST00000459562 61 ntBASIC0.57□□□□□ -2.32
COL5A1P20908 AL133373.1-201ENST00000497098 94 ntBASIC0.57□□□□□ -2.32
COL5A1P20908 RNA5SP285-201ENST00000516619 119 ntBASIC0.57□□□□□ -2.32
COL5A1P20908 AC027335.2-201ENST00000624030 375 ntBASIC0.57□□□□□ -2.32
COL5A1P20908 SNORD38B-202ENST00000625943 69 ntBASIC0.57□□□□□ -2.32
COL5A1P20908 SNORD116-18-201ENST00000383961 92 ntBASIC0.56□□□□□ -2.32
COL5A1P20908 SNORA25-201ENST00000384384 134 ntBASIC0.56□□□□□ -2.32
COL5A1P20908 SNORA2B-201ENST00000384583 137 ntBASIC0.56□□□□□ -2.32
COL5A1P20908 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
COL5A1P20908 AL603914.1-201ENST00000401964 204 ntBASIC0.56□□□□□ -2.32
COL5A1P20908 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.56□□□□□ -2.32
COL5A1P20908 snoU13.2-201ENST00000459201 104 ntBASIC0.56□□□□□ -2.32
COL5A1P20908 RNU7-200P-201ENST00000516105 62 ntBASIC0.56□□□□□ -2.32
COL5A1P20908 SNORA25.12-201ENST00000516202 82 ntBASIC0.56□□□□□ -2.32
COL5A1P20908 CYP3A52P-201ENST00000563326 91 ntBASIC0.56□□□□□ -2.32
COL5A1P20908 AC015688.6-201ENST00000577737 104 ntBASIC0.56□□□□□ -2.32
COL5A1P20908 MIR5197-201ENST00000583721 112 ntBASIC0.56□□□□□ -2.32
COL5A1P20908 MIR4653-201ENST00000585107 83 ntBASIC0.56□□□□□ -2.32
COL5A1P20908 AC021443.1-201ENST00000604478 211 ntBASIC0.56□□□□□ -2.32
COL5A1P20908 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.56□□□□□ -2.32
COL5A1P20908 MIR4251-201ENST00000635819 61 ntBASIC0.56□□□□□ -2.32
COL5A1P20908 RNU6-508P-201ENST00000363231 103 ntBASIC0.55□□□□□ -2.32
COL5A1P20908 RNU6-1130P-201ENST00000365434 107 ntBASIC0.55□□□□□ -2.32
COL5A1P20908 RNU6-1292P-201ENST00000383856 107 ntBASIC0.55□□□□□ -2.32
COL5A1P20908 MIR19B1-201ENST00000384829 87 ntBASIC0.55□□□□□ -2.32
COL5A1P20908 SNORD77.3-201ENST00000391113 65 ntBASIC0.55□□□□□ -2.32
COL5A1P20908 AC006461.1-201ENST00000412637 326 ntBASIC0.55□□□□□ -2.32
COL5A1P20908 SNORD123-201ENST00000459473 70 ntBASIC0.55□□□□□ -2.32
COL5A1P20908 SNORA31.2-201ENST00000516019 134 ntBASIC0.55□□□□□ -2.32
COL5A1P20908 Y_RNA.692-201ENST00000516627 105 ntBASIC0.55□□□□□ -2.32
COL5A1P20908 SNORA62.5-201ENST00000516634 120 ntBASIC0.55□□□□□ -2.32
COL5A1P20908 RNU6-1234P-201ENST00000516877 103 ntBASIC0.55□□□□□ -2.32
COL5A1P20908 SCARNA15-202ENST00000516881 127 ntBASIC0.55□□□□□ -2.32
COL5A1P20908 AP003716.2-201ENST00000528260 108 ntBASIC0.55□□□□□ -2.32
COL5A1P20908 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.55□□□□□ -2.32
COL5A1P20908 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
COL5A1P20908 SNORD113.3-201ENST00000364630 78 ntBASIC0.54□□□□□ -2.32
COL5A1P20908 SNORA1.1-201ENST00000364671 133 ntBASIC0.54□□□□□ -2.32
COL5A1P20908 Y_RNA.330-201ENST00000365230 109 ntBASIC0.54□□□□□ -2.32
COL5A1P20908 Y_RNA.497-201ENST00000384447 98 ntBASIC0.54□□□□□ -2.32
COL5A1P20908 MIR92A1-201ENST00000385233 78 ntBASIC0.54□□□□□ -2.32
COL5A1P20908 MIR1912-201ENST00000410389 80 ntBASIC0.54□□□□□ -2.32
COL5A1P20908 AC090844.1-201ENST00000422019 156 ntBASIC0.54□□□□□ -2.32
COL5A1P20908 Y_RNA.703-201ENST00000516846 111 ntBASIC0.54□□□□□ -2.32
COL5A1P20908 MIR4514-201ENST00000581410 57 ntBASIC0.54□□□□□ -2.32
COL5A1P20908 AC243994.1-201ENST00000618627 109 ntBASIC0.54□□□□□ -2.32
COL5A1P20908 AL596211.1-201ENST00000569873 2277 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms