Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 Y_RNA.288-201ENST00000364854 92 ntBASIC0.55□□□□□ -2.32
CAPN3P20807 MIR563-201ENST00000385080 79 ntBASIC0.55□□□□□ -2.32
CAPN3P20807 AL121914.1-201ENST00000450188 156 ntBASIC0.55□□□□□ -2.32
CAPN3P20807 SNORD116-25-201ENST00000516517 92 ntBASIC0.55□□□□□ -2.32
CAPN3P20807 RNA5SP476-201ENST00000516613 103 ntBASIC0.55□□□□□ -2.32
CAPN3P20807 SNORA62.5-201ENST00000516634 120 ntBASIC0.55□□□□□ -2.32
CAPN3P20807 MIR4744-201ENST00000581563 82 ntBASIC0.55□□□□□ -2.32
CAPN3P20807 AC008737.2-201ENST00000599446 118 ntBASIC0.55□□□□□ -2.32
CAPN3P20807 AL162730.1-201ENST00000605734 292 ntBASIC0.55□□□□□ -2.32
CAPN3P20807 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
CAPN3P20807 uc_338.16-201ENST00000621804 95 ntBASIC0.55□□□□□ -2.32
CAPN3P20807 RNU6-35P-201ENST00000384530 107 ntBASIC0.54□□□□□ -2.32
CAPN3P20807 Y_RNA.515-201ENST00000384535 112 ntBASIC0.54□□□□□ -2.32
CAPN3P20807 Y_RNA.556-201ENST00000384677 113 ntBASIC0.54□□□□□ -2.32
CAPN3P20807 HAR1A.1-201ENST00000459583 118 ntBASIC0.54□□□□□ -2.32
CAPN3P20807 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
CAPN3P20807 AC090897.1-201ENST00000580909 226 ntBASIC0.54□□□□□ -2.32
CAPN3P20807 SNORD12C-201ENST00000386307 89 ntBASIC0.53□□□□□ -2.32
CAPN3P20807 RNU6-1190P-201ENST00000410811 104 ntBASIC0.53□□□□□ -2.32
CAPN3P20807 RNU7-156P-201ENST00000517214 74 ntBASIC0.53□□□□□ -2.32
CAPN3P20807 SNORD92-201ENST00000585078 85 ntBASIC0.53□□□□□ -2.32
CAPN3P20807 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
CAPN3P20807 Y_RNA.292-201ENST00000364904 97 ntBASIC0.52□□□□□ -2.33
CAPN3P20807 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
CAPN3P20807 Y_RNA.430-201ENST00000384081 110 ntBASIC0.52□□□□□ -2.33
CAPN3P20807 RNU6-472P-201ENST00000384299 107 ntBASIC0.52□□□□□ -2.33
CAPN3P20807 RNU6-1011P-201ENST00000384668 107 ntBASIC0.52□□□□□ -2.33
CAPN3P20807 MIR1302-3-201ENST00000408128 138 ntBASIC0.52□□□□□ -2.33
CAPN3P20807 AL157398.1-201ENST00000452981 186 ntBASIC0.52□□□□□ -2.33
CAPN3P20807 RNU6-893P-201ENST00000458841 100 ntBASIC0.52□□□□□ -2.33
CAPN3P20807 RNU7-102P-201ENST00000458948 62 ntBASIC0.52□□□□□ -2.33
CAPN3P20807 AC243829.6-201ENST00000612652 106 ntBASIC0.52□□□□□ -2.33
CAPN3P20807 uc_338.6-201ENST00000613544 171 ntBASIC0.52□□□□□ -2.33
CAPN3P20807 AC091932.4-201ENST00000623386 200 ntBASIC0.52□□□□□ -2.33
CAPN3P20807 AL596211.1-201ENST00000569873 2277 ntBASIC0.52□□□□□ -2.33
CAPN3P20807 Y_RNA.47-201ENST00000362697 108 ntBASIC0.51□□□□□ -2.33
CAPN3P20807 Y_RNA.277-201ENST00000364754 102 ntBASIC0.51□□□□□ -2.33
CAPN3P20807 RNA5SP117-201ENST00000365294 118 ntBASIC0.51□□□□□ -2.33
CAPN3P20807 SNORD100-201ENST00000408573 76 ntBASIC0.51□□□□□ -2.33
CAPN3P20807 AC092634.7-201ENST00000621022 103 ntBASIC0.51□□□□□ -2.33
CAPN3P20807 VTRNA1-3-201ENST00000365645 89 ntBASIC0.5□□□□□ -2.33
CAPN3P20807 SNORA50A-201ENST00000384225 134 ntBASIC0.5□□□□□ -2.33
CAPN3P20807 Y_RNA.459-201ENST00000384251 102 ntBASIC0.5□□□□□ -2.33
CAPN3P20807 SNORA26.6-201ENST00000391256 115 ntBASIC0.5□□□□□ -2.33
CAPN3P20807 SNORD71-201ENST00000411292 86 ntBASIC0.5□□□□□ -2.33
CAPN3P20807 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.5□□□□□ -2.33
CAPN3P20807 MIR30D-201ENST00000362283 70 ntBASIC0.49□□□□□ -2.33
CAPN3P20807 Y_RNA.121-201ENST00000363309 113 ntBASIC0.49□□□□□ -2.33
CAPN3P20807 Y_RNA.396-201ENST00000383949 103 ntBASIC0.49□□□□□ -2.33
CAPN3P20807 SNORD93-201ENST00000408813 74 ntBASIC0.49□□□□□ -2.33
CAPN3P20807 RNU6-229P-201ENST00000516614 102 ntBASIC0.49□□□□□ -2.33
CAPN3P20807 MIR378D2-201ENST00000580636 98 ntBASIC0.49□□□□□ -2.33
CAPN3P20807 RNA5SP499-201ENST00000363982 119 ntBASIC0.48□□□□□ -2.33
CAPN3P20807 RNY1P8-201ENST00000383970 114 ntBASIC0.48□□□□□ -2.33
CAPN3P20807 AC098934.3-201ENST00000430450 190 ntBASIC0.48□□□□□ -2.33
CAPN3P20807 SEPT7P4-201ENST00000437076 306 ntBASIC0.48□□□□□ -2.33
CAPN3P20807 AC002350.1-201ENST00000490759 375 ntBASIC0.48□□□□□ -2.33
CAPN3P20807 MTND1P19-201ENST00000511780 315 ntBASIC0.48□□□□□ -2.33
CAPN3P20807 Y_RNA.797-201ENST00000515977 94 ntBASIC0.48□□□□□ -2.33
CAPN3P20807 RNA5SP285-201ENST00000516619 119 ntBASIC0.48□□□□□ -2.33
CAPN3P20807 RNU6-448P-201ENST00000517052 107 ntBASIC0.48□□□□□ -2.33
CAPN3P20807 AL662814.1-201ENST00000617364 121 ntBASIC0.48□□□□□ -2.33
CAPN3P20807 AC090625.1-201ENST00000357130 210 ntBASIC0.47□□□□□ -2.33
CAPN3P20807 RNU6-738P-201ENST00000384531 106 ntBASIC0.47□□□□□ -2.33
CAPN3P20807 RNU6-578P-201ENST00000390980 103 ntBASIC0.47□□□□□ -2.33
CAPN3P20807 RNA5SP63-201ENST00000391225 112 ntBASIC0.47□□□□□ -2.33
CAPN3P20807 AC114737.2-201ENST00000421583 173 ntBASIC0.47□□□□□ -2.33
CAPN3P20807 SNORD127-201ENST00000458892 86 ntBASIC0.47□□□□□ -2.33
CAPN3P20807 RNU6-561P-201ENST00000516222 102 ntBASIC0.47□□□□□ -2.33
CAPN3P20807 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.47□□□□□ -2.33
CAPN3P20807 Y_RNA.412-201ENST00000384001 104 ntBASIC0.46□□□□□ -2.34
CAPN3P20807 RNU6-679P-201ENST00000391003 106 ntBASIC0.46□□□□□ -2.34
CAPN3P20807 RNU2-38P-201ENST00000410856 79 ntBASIC0.46□□□□□ -2.34
CAPN3P20807 RNU4-83P-201ENST00000410863 133 ntBASIC0.46□□□□□ -2.34
CAPN3P20807 RNU6-469P-201ENST00000516253 101 ntBASIC0.46□□□□□ -2.34
CAPN3P20807 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.46□□□□□ -2.34
CAPN3P20807 AP003327.1-201ENST00000529684 127 ntBASIC0.46□□□□□ -2.34
CAPN3P20807 SNORD18A-201ENST00000363753 72 ntBASIC0.45□□□□□ -2.34
CAPN3P20807 Y_RNA.308-201ENST00000365043 101 ntBASIC0.45□□□□□ -2.34
CAPN3P20807 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.45□□□□□ -2.34
CAPN3P20807 RNU7-45P-201ENST00000459460 63 ntBASIC0.45□□□□□ -2.34
CAPN3P20807 SNORA25.12-201ENST00000516202 82 ntBASIC0.45□□□□□ -2.34
CAPN3P20807 AC008608.1-201ENST00000603910 127 ntBASIC0.45□□□□□ -2.34
CAPN3P20807 Y_RNA.76-201ENST00000362931 109 ntBASIC0.44□□□□□ -2.34
CAPN3P20807 Y_RNA.478-201ENST00000384358 107 ntBASIC0.44□□□□□ -2.34
CAPN3P20807 MIR624-201ENST00000385217 97 ntBASIC0.44□□□□□ -2.34
CAPN3P20807 AC023932.2-201ENST00000603176 175 ntBASIC0.44□□□□□ -2.34
CAPN3P20807 MIR2909-201ENST00000617113 69 ntBASIC0.44□□□□□ -2.34
CAPN3P20807 AC021613.1-201ENST00000623880 111 ntBASIC0.44□□□□□ -2.34
CAPN3P20807 MIR376A2-201ENST00000636782 80 ntBASIC0.44□□□□□ -2.34
CAPN3P20807 MIR6086-201ENST00000638065 55 ntBASIC0.44□□□□□ -2.34
CAPN3P20807 SNORA22.1-201ENST00000362701 134 ntBASIC0.43□□□□□ -2.34
CAPN3P20807 SNORA25.7-201ENST00000364375 127 ntBASIC0.43□□□□□ -2.34
CAPN3P20807 Y_RNA.274-201ENST00000364714 101 ntBASIC0.43□□□□□ -2.34
CAPN3P20807 Y_RNA.294-201ENST00000364916 102 ntBASIC0.43□□□□□ -2.34
CAPN3P20807 SNORA40.8-201ENST00000411034 126 ntBASIC0.43□□□□□ -2.34
CAPN3P20807 MIR4643-201ENST00000577473 78 ntBASIC0.43□□□□□ -2.34
CAPN3P20807 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.43□□□□□ -2.34
CAPN3P20807 RNY4P28-201ENST00000365281 93 ntBASIC0.42□□□□□ -2.34
CAPN3P20807 RNU6-643P-201ENST00000384018 107 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms