Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 RNU6-322P-201ENST00000516010 103 ntBASIC2.49□□□□□ -2.01
HOXD8P13378 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.49□□□□□ -2.01
HOXD8P13378 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HOXD8P13378 MIR6073-201ENST00000352083 89 ntBASIC2.48□□□□□ -2.01
HOXD8P13378 SNORD38.1-201ENST00000363863 68 ntBASIC2.48□□□□□ -2.01
HOXD8P13378 RNU6-1237P-201ENST00000384777 107 ntBASIC2.48□□□□□ -2.01
HOXD8P13378 SNORD67.1-201ENST00000516618 108 ntBASIC2.48□□□□□ -2.01
HOXD8P13378 SNORA31.17-201ENST00000516953 127 ntBASIC2.48□□□□□ -2.01
HOXD8P13378 RNU6-86P-201ENST00000606534 107 ntBASIC2.48□□□□□ -2.01
HOXD8P13378 AC103810.7-201ENST00000607821 91 ntBASIC2.48□□□□□ -2.01
HOXD8P13378 MIR6873-201ENST00000622788 63 ntBASIC2.48□□□□□ -2.01
HOXD8P13378 ZNF355P-201ENST00000427301 3216 ntBASIC2.48□□□□□ -2.01
HOXD8P13378 RNU6-1123P-201ENST00000362347 106 ntBASIC2.47□□□□□ -2.01
HOXD8P13378 Y_RNA.247-201ENST00000364500 92 ntBASIC2.47□□□□□ -2.01
HOXD8P13378 Y_RNA.437-201ENST00000384113 113 ntBASIC2.47□□□□□ -2.01
HOXD8P13378 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.47□□□□□ -2.01
HOXD8P13378 MIR4529-201ENST00000578110 78 ntBASIC2.47□□□□□ -2.01
HOXD8P13378 AC105081.1-201ENST00000617727 106 ntBASIC2.47□□□□□ -2.01
HOXD8P13378 MIR219B-201ENST00000637023 88 ntBASIC2.47□□□□□ -2.01
HOXD8P13378 RNU6-219P-201ENST00000364728 107 ntBASIC2.46□□□□□ -2.02
HOXD8P13378 RNY1P4-201ENST00000384595 115 ntBASIC2.46□□□□□ -2.02
HOXD8P13378 RNU6-788P-201ENST00000390967 104 ntBASIC2.46□□□□□ -2.02
HOXD8P13378 RNA5SP237-201ENST00000410414 113 ntBASIC2.46□□□□□ -2.02
HOXD8P13378 Y_RNA.620-201ENST00000411009 88 ntBASIC2.46□□□□□ -2.02
HOXD8P13378 RPL31P63-201ENST00000422565 375 ntBASIC2.46□□□□□ -2.02
HOXD8P13378 SPINT5P-201ENST00000448174 155 ntBASIC2.46□□□□□ -2.02
HOXD8P13378 RNU7-79P-201ENST00000516082 62 ntBASIC2.46□□□□□ -2.02
HOXD8P13378 RNU7-35P-201ENST00000517174 62 ntBASIC2.46□□□□□ -2.02
HOXD8P13378 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.46□□□□□ -2.02
HOXD8P13378 MIR4446-201ENST00000578505 67 ntBASIC2.46□□□□□ -2.02
HOXD8P13378 AL049779.4-201ENST00000604500 156 ntBASIC2.46□□□□□ -2.02
HOXD8P13378 MIR8055-201ENST00000610739 97 ntBASIC2.46□□□□□ -2.02
HOXD8P13378 MIR8065-201ENST00000620577 100 ntBASIC2.46□□□□□ -2.02
HOXD8P13378 MIR4251-201ENST00000635819 61 ntBASIC2.46□□□□□ -2.02
HOXD8P13378 Z97988.1-201ENST00000637697 135 ntBASIC2.46□□□□□ -2.02
HOXD8P13378 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.46□□□□□ -2.02
HOXD8P13378 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.46□□□□□ -2.02
HOXD8P13378 MAPK10-266ENST00000641066 6555 ntBASIC2.46□□□□□ -2.02
HOXD8P13378 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
HOXD8P13378 SNORD38.2-201ENST00000384470 69 ntBASIC2.45□□□□□ -2.02
HOXD8P13378 MIR34C-201ENST00000384831 77 ntBASIC2.45□□□□□ -2.02
HOXD8P13378 RNA5SP100-201ENST00000410903 110 ntBASIC2.45□□□□□ -2.02
HOXD8P13378 RNA5SP59-201ENST00000410922 110 ntBASIC2.45□□□□□ -2.02
HOXD8P13378 RNU6-602P-201ENST00000411155 105 ntBASIC2.45□□□□□ -2.02
HOXD8P13378 RNA5SP450-201ENST00000411206 102 ntBASIC2.45□□□□□ -2.02
HOXD8P13378 AC027119.1-201ENST00000440877 241 ntBASIC2.45□□□□□ -2.02
HOXD8P13378 UBL5P1-201ENST00000507979 193 ntBASIC2.45□□□□□ -2.02
HOXD8P13378 RNU6-917P-201ENST00000516294 104 ntBASIC2.45□□□□□ -2.02
HOXD8P13378 RNU6-267P-201ENST00000516714 103 ntBASIC2.45□□□□□ -2.02
HOXD8P13378 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.45□□□□□ -2.02
HOXD8P13378 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.45□□□□□ -2.02
HOXD8P13378 MIR4668-201ENST00000582284 70 ntBASIC2.45□□□□□ -2.02
HOXD8P13378 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.45□□□□□ -2.02
HOXD8P13378 AP000942.3-201ENST00000603702 160 ntBASIC2.45□□□□□ -2.02
HOXD8P13378 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.45□□□□□ -2.02
HOXD8P13378 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.45□□□□□ -2.02
HOXD8P13378 Y_RNA.140-201ENST00000363474 103 ntBASIC2.44□□□□□ -2.02
HOXD8P13378 RNU6-776P-201ENST00000364403 104 ntBASIC2.44□□□□□ -2.02
HOXD8P13378 RNU6-1022P-201ENST00000365049 104 ntBASIC2.44□□□□□ -2.02
HOXD8P13378 RNU1-52P-201ENST00000384190 164 ntBASIC2.44□□□□□ -2.02
HOXD8P13378 SNORD38B-201ENST00000384690 67 ntBASIC2.44□□□□□ -2.02
HOXD8P13378 RNU6-360P-201ENST00000390944 104 ntBASIC2.44□□□□□ -2.02
HOXD8P13378 SNORA48.3-201ENST00000391081 134 ntBASIC2.44□□□□□ -2.02
HOXD8P13378 RNA5SP181-201ENST00000410246 98 ntBASIC2.44□□□□□ -2.02
HOXD8P13378 SNORD38B-202ENST00000625943 69 ntBASIC2.44□□□□□ -2.02
HOXD8P13378 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.43□□□□□ -2.02
HOXD8P13378 AC005336.3-201ENST00000623833 2679 ntBASIC2.43□□□□□ -2.02
HOXD8P13378 SNORD58A-201ENST00000383875 65 ntBASIC2.43□□□□□ -2.02
HOXD8P13378 RNU6-1307P-201ENST00000391012 103 ntBASIC2.43□□□□□ -2.02
HOXD8P13378 Y_RNA.607-201ENST00000410597 98 ntBASIC2.43□□□□□ -2.02
HOXD8P13378 AL445685.2-201ENST00000422551 342 ntBASIC2.43□□□□□ -2.02
HOXD8P13378 RNA5SP445-201ENST00000515889 115 ntBASIC2.43□□□□□ -2.02
HOXD8P13378 MTND5P40-201ENST00000559945 246 ntBASIC2.43□□□□□ -2.02
HOXD8P13378 MIR4498-201ENST00000577599 66 ntBASIC2.43□□□□□ -2.02
HOXD8P13378 MIR3935-201ENST00000583472 104 ntBASIC2.43□□□□□ -2.02
HOXD8P13378 AL137847.3-201ENST00000611521 109 ntBASIC2.43□□□□□ -2.02
HOXD8P13378 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.43□□□□□ -2.02
HOXD8P13378 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.43□□□□□ -2.02
HOXD8P13378 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
HOXD8P13378 Y_RNA.313-201ENST00000365095 103 ntBASIC2.42□□□□□ -2.02
HOXD8P13378 RNA5SP259-201ENST00000365541 109 ntBASIC2.42□□□□□ -2.02
HOXD8P13378 SNORA67.3-201ENST00000384366 140 ntBASIC2.42□□□□□ -2.02
HOXD8P13378 Y_RNA.611-201ENST00000410682 108 ntBASIC2.42□□□□□ -2.02
HOXD8P13378 AC011753.1-201ENST00000451001 220 ntBASIC2.42□□□□□ -2.02
HOXD8P13378 AC139453.2-201ENST00000487255 133 ntBASIC2.42□□□□□ -2.02
HOXD8P13378 RNU6-1006P-201ENST00000516998 103 ntBASIC2.42□□□□□ -2.02
HOXD8P13378 MIR548AO-201ENST00000579992 96 ntBASIC2.42□□□□□ -2.02
HOXD8P13378 RNU6-90P-201ENST00000606352 106 ntBASIC2.42□□□□□ -2.02
HOXD8P13378 MIR6132-201ENST00000622083 109 ntBASIC2.42□□□□□ -2.02
HOXD8P13378 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.42□□□□□ -2.02
HOXD8P13378 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HOXD8P13378 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
HOXD8P13378 SNORD114-10-201ENST00000363409 72 ntBASIC2.41□□□□□ -2.02
HOXD8P13378 SNORA3A-201ENST00000364113 130 ntBASIC2.41□□□□□ -2.02
HOXD8P13378 RNA5SP138-201ENST00000365098 114 ntBASIC2.41□□□□□ -2.02
HOXD8P13378 Y_RNA.508-201ENST00000384502 114 ntBASIC2.41□□□□□ -2.02
HOXD8P13378 Y_RNA.567-201ENST00000384736 106 ntBASIC2.41□□□□□ -2.02
HOXD8P13378 MIR548G-201ENST00000408442 89 ntBASIC2.41□□□□□ -2.02
HOXD8P13378 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
HOXD8P13378 SNORD111.1-201ENST00000516421 86 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms