Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 SNORA3A-201ENST00000364113 130 ntBASIC2.47□□□□□ -2.01
RARAP10276 RNU6-865P-201ENST00000364772 107 ntBASIC2.47□□□□□ -2.01
RARAP10276 MIR489-201ENST00000384923 84 ntBASIC2.47□□□□□ -2.01
RARAP10276 RNU6-1321P-201ENST00000390905 107 ntBASIC2.47□□□□□ -2.01
RARAP10276 AL513328.1-201ENST00000446460 224 ntBASIC2.47□□□□□ -2.01
RARAP10276 SNORD114-10-201ENST00000363409 72 ntBASIC2.46□□□□□ -2.02
RARAP10276 RNU6-1244P-201ENST00000363614 108 ntBASIC2.46□□□□□ -2.02
RARAP10276 RNA5SP99-201ENST00000364020 114 ntBASIC2.46□□□□□ -2.02
RARAP10276 MIR194-1-201ENST00000384892 85 ntBASIC2.46□□□□□ -2.02
RARAP10276 SUMO1P4-201ENST00000429430 302 ntBASIC2.46□□□□□ -2.02
RARAP10276 AC105081.1-201ENST00000617727 106 ntBASIC2.46□□□□□ -2.02
RARAP10276 MIR4251-201ENST00000635819 61 ntBASIC2.46□□□□□ -2.02
RARAP10276 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
RARAP10276 MIR548G-201ENST00000408442 89 ntBASIC2.45□□□□□ -2.02
RARAP10276 RNU6-447P-201ENST00000410293 104 ntBASIC2.45□□□□□ -2.02
RARAP10276 RNU6-1118P-201ENST00000410382 104 ntBASIC2.45□□□□□ -2.02
RARAP10276 RNU6-1076P-201ENST00000410397 104 ntBASIC2.45□□□□□ -2.02
RARAP10276 RNU6-355P-201ENST00000410427 104 ntBASIC2.45□□□□□ -2.02
RARAP10276 RNU6-791P-201ENST00000410467 104 ntBASIC2.45□□□□□ -2.02
RARAP10276 RNU6-705P-201ENST00000410601 104 ntBASIC2.45□□□□□ -2.02
RARAP10276 RNU6-1100P-201ENST00000410691 104 ntBASIC2.45□□□□□ -2.02
RARAP10276 RNU6-860P-201ENST00000410860 104 ntBASIC2.45□□□□□ -2.02
RARAP10276 RNU6-1217P-201ENST00000411276 104 ntBASIC2.45□□□□□ -2.02
RARAP10276 RNU6-785P-201ENST00000411324 104 ntBASIC2.45□□□□□ -2.02
RARAP10276 RPL31P63-201ENST00000422565 375 ntBASIC2.45□□□□□ -2.02
RARAP10276 RNA5SP82-201ENST00000516707 92 ntBASIC2.45□□□□□ -2.02
RARAP10276 MIR4529-201ENST00000578110 78 ntBASIC2.45□□□□□ -2.02
RARAP10276 MIR4666B-201ENST00000578142 81 ntBASIC2.45□□□□□ -2.02
RARAP10276 MIR5194-201ENST00000582634 120 ntBASIC2.45□□□□□ -2.02
RARAP10276 U6.90-201ENST00000614007 104 ntBASIC2.45□□□□□ -2.02
RARAP10276 U6.70-201ENST00000620287 104 ntBASIC2.45□□□□□ -2.02
RARAP10276 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
RARAP10276 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.44□□□□□ -2.02
RARAP10276 RNA5SP393-201ENST00000363423 117 ntBASIC2.44□□□□□ -2.02
RARAP10276 RNU1-52P-201ENST00000384190 164 ntBASIC2.44□□□□□ -2.02
RARAP10276 MIR653-201ENST00000385279 96 ntBASIC2.44□□□□□ -2.02
RARAP10276 AC019129.1-201ENST00000403786 261 ntBASIC2.44□□□□□ -2.02
RARAP10276 AC008413.1-201ENST00000511864 177 ntBASIC2.44□□□□□ -2.02
RARAP10276 RNU7-41P-201ENST00000515917 61 ntBASIC2.44□□□□□ -2.02
RARAP10276 RNU7-193P-201ENST00000516723 65 ntBASIC2.44□□□□□ -2.02
RARAP10276 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.44□□□□□ -2.02
RARAP10276 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
RARAP10276 U8.2-201ENST00000363156 134 ntBASIC2.43□□□□□ -2.02
RARAP10276 SNORD114-30-201ENST00000364448 72 ntBASIC2.43□□□□□ -2.02
RARAP10276 Y_RNA.426-201ENST00000384068 113 ntBASIC2.43□□□□□ -2.02
RARAP10276 SNORD38B-201ENST00000384690 67 ntBASIC2.43□□□□□ -2.02
RARAP10276 Y_RNA.567-201ENST00000384736 106 ntBASIC2.43□□□□□ -2.02
RARAP10276 AC004965.1-201ENST00000413033 213 ntBASIC2.43□□□□□ -2.02
RARAP10276 RNU7-48P-201ENST00000458875 63 ntBASIC2.43□□□□□ -2.02
RARAP10276 snoU13.15-201ENST00000459407 104 ntBASIC2.43□□□□□ -2.02
RARAP10276 RNU1-41P-201ENST00000516161 162 ntBASIC2.43□□□□□ -2.02
RARAP10276 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.43□□□□□ -2.02
RARAP10276 RNU1-48P-201ENST00000516400 162 ntBASIC2.43□□□□□ -2.02
RARAP10276 RNU6-90P-201ENST00000606352 106 ntBASIC2.43□□□□□ -2.02
RARAP10276 SNORD38B-202ENST00000625943 69 ntBASIC2.43□□□□□ -2.02
RARAP10276 AC080100.1-201ENST00000624239 5356 ntBASIC2.43□□□□□ -2.02
RARAP10276 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.43□□□□□ -2.02
RARAP10276 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
RARAP10276 RNY1P13-201ENST00000365030 105 ntBASIC2.42□□□□□ -2.02
RARAP10276 Y_RNA.437-201ENST00000384113 113 ntBASIC2.42□□□□□ -2.02
RARAP10276 RNU6-1237P-201ENST00000384777 107 ntBASIC2.42□□□□□ -2.02
RARAP10276 RNU6-279P-201ENST00000391297 101 ntBASIC2.42□□□□□ -2.02
RARAP10276 AL591806.2-201ENST00000433122 173 ntBASIC2.42□□□□□ -2.02
RARAP10276 RNU6-322P-201ENST00000516010 103 ntBASIC2.42□□□□□ -2.02
RARAP10276 MIR3935-201ENST00000583472 104 ntBASIC2.42□□□□□ -2.02
RARAP10276 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.42□□□□□ -2.02
RARAP10276 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
RARAP10276 Y_RNA.191-201ENST00000363972 113 ntBASIC2.41□□□□□ -2.02
RARAP10276 Y_RNA.313-201ENST00000365095 103 ntBASIC2.41□□□□□ -2.02
RARAP10276 Y_RNA.611-201ENST00000410682 108 ntBASIC2.41□□□□□ -2.02
RARAP10276 SPINT5P-201ENST00000448174 155 ntBASIC2.41□□□□□ -2.02
RARAP10276 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.41□□□□□ -2.02
RARAP10276 AC006160.2-201ENST00000637708 154 ntBASIC2.41□□□□□ -2.02
RARAP10276 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.41□□□□□ -2.02
RARAP10276 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
RARAP10276 Y_RNA.98-201ENST00000363109 102 ntBASIC2.4□□□□□ -2.03
RARAP10276 RNU6-509P-201ENST00000363519 107 ntBASIC2.4□□□□□ -2.03
RARAP10276 Y_RNA.173-201ENST00000363776 113 ntBASIC2.4□□□□□ -2.03
RARAP10276 Y_RNA.609-201ENST00000410669 89 ntBASIC2.4□□□□□ -2.03
RARAP10276 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.4□□□□□ -2.03
RARAP10276 MIR5007-201ENST00000583098 95 ntBASIC2.4□□□□□ -2.03
RARAP10276 MIR548BB-201ENST00000626714 66 ntBASIC2.4□□□□□ -2.03
RARAP10276 RNU6-1125P-201ENST00000363601 107 ntBASIC2.39□□□□□ -2.03
RARAP10276 Y_RNA.244-201ENST00000364484 109 ntBASIC2.39□□□□□ -2.03
RARAP10276 SNORD38.2-201ENST00000384470 69 ntBASIC2.39□□□□□ -2.03
RARAP10276 SNORA67.4-201ENST00000384688 142 ntBASIC2.39□□□□□ -2.03
RARAP10276 AL161935.2-201ENST00000414627 60 ntBASIC2.39□□□□□ -2.03
RARAP10276 AC009474.2-201ENST00000451383 136 ntBASIC2.39□□□□□ -2.03
RARAP10276 RNU1-98P-201ENST00000458992 160 ntBASIC2.39□□□□□ -2.03
RARAP10276 AC104435.1-201ENST00000483483 166 ntBASIC2.39□□□□□ -2.03
RARAP10276 AC141846.1-201ENST00000568348 142 ntBASIC2.39□□□□□ -2.03
RARAP10276 MIR6766-201ENST00000622641 72 ntBASIC2.39□□□□□ -2.03
RARAP10276 AP001362.1-201ENST00000625165 124 ntBASIC2.39□□□□□ -2.03
RARAP10276 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
RARAP10276 AC131280.1-202ENST00000624067 4211 ntBASIC2.38□□□□□ -2.03
RARAP10276 RNA5SP289-201ENST00000362332 137 ntBASIC2.38□□□□□ -2.03
RARAP10276 RNU6-633P-201ENST00000362612 103 ntBASIC2.38□□□□□ -2.03
RARAP10276 RNA5SP138-201ENST00000365098 114 ntBASIC2.38□□□□□ -2.03
RARAP10276 MIR144-201ENST00000384886 86 ntBASIC2.38□□□□□ -2.03
RARAP10276 RNA5SP237-201ENST00000410414 113 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms