Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 RNU7-80P-201ENST00000459562 61 ntBASIC0.32□□□□□ -2.36
SFTPBP07988 RNU6-448P-201ENST00000517052 107 ntBASIC0.32□□□□□ -2.36
SFTPBP07988 MIR4643-201ENST00000577473 78 ntBASIC0.32□□□□□ -2.36
SFTPBP07988 RNA5SP117-201ENST00000365294 118 ntBASIC0.31□□□□□ -2.36
SFTPBP07988 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.31□□□□□ -2.36
SFTPBP07988 RNA5SP261-201ENST00000410536 106 ntBASIC0.31□□□□□ -2.36
SFTPBP07988 RNU4-83P-201ENST00000410863 133 ntBASIC0.31□□□□□ -2.36
SFTPBP07988 Y_RNA.618-201ENST00000410949 107 ntBASIC0.31□□□□□ -2.36
SFTPBP07988 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.31□□□□□ -2.36
SFTPBP07988 SNORA25.18-201ENST00000607153 114 ntBASIC0.31□□□□□ -2.36
SFTPBP07988 AL662814.1-201ENST00000617364 121 ntBASIC0.31□□□□□ -2.36
SFTPBP07988 U6.104-201ENST00000637979 90 ntBASIC0.31□□□□□ -2.36
SFTPBP07988 MIR103A1-201ENST00000362165 78 ntBASIC0.3□□□□□ -2.36
SFTPBP07988 Y_RNA.54-201ENST00000362766 105 ntBASIC0.3□□□□□ -2.36
SFTPBP07988 Y_RNA.262-201ENST00000364641 102 ntBASIC0.3□□□□□ -2.36
SFTPBP07988 Y_RNA.454-201ENST00000384224 113 ntBASIC0.3□□□□□ -2.36
SFTPBP07988 RNU6-472P-201ENST00000384299 107 ntBASIC0.3□□□□□ -2.36
SFTPBP07988 Y_RNA.574-201ENST00000384766 95 ntBASIC0.3□□□□□ -2.36
SFTPBP07988 MIR518A1-201ENST00000385068 85 ntBASIC0.3□□□□□ -2.36
SFTPBP07988 Y_RNA.617-201ENST00000410920 90 ntBASIC0.3□□□□□ -2.36
SFTPBP07988 SNORA40.8-201ENST00000411034 126 ntBASIC0.3□□□□□ -2.36
SFTPBP07988 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.3□□□□□ -2.36
SFTPBP07988 MIR3678-201ENST00000578455 94 ntBASIC0.3□□□□□ -2.36
SFTPBP07988 MIR4514-201ENST00000581410 57 ntBASIC0.3□□□□□ -2.36
SFTPBP07988 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.3□□□□□ -2.36
SFTPBP07988 Y_RNA.68-201ENST00000362881 102 ntBASIC0.29□□□□□ -2.36
SFTPBP07988 Y_RNA.277-201ENST00000364754 102 ntBASIC0.29□□□□□ -2.36
SFTPBP07988 RNU6-1292P-201ENST00000383856 107 ntBASIC0.29□□□□□ -2.36
SFTPBP07988 Y_RNA.422-201ENST00000384054 114 ntBASIC0.29□□□□□ -2.36
SFTPBP07988 Y_RNA.681-201ENST00000516445 113 ntBASIC0.29□□□□□ -2.36
SFTPBP07988 RNA5SP134-201ENST00000516492 96 ntBASIC0.29□□□□□ -2.36
SFTPBP07988 AC133485.4-201ENST00000561835 220 ntBASIC0.29□□□□□ -2.36
SFTPBP07988 AL365205.2-201ENST00000594586 68 ntBASIC0.29□□□□□ -2.36
SFTPBP07988 AL442067.1-201ENST00000613261 223 ntBASIC0.29□□□□□ -2.36
SFTPBP07988 MIR8066-201ENST00000617280 78 ntBASIC0.29□□□□□ -2.36
SFTPBP07988 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
SFTPBP07988 Y_RNA.11-201ENST00000362375 109 ntBASIC0.28□□□□□ -2.36
SFTPBP07988 Y_RNA.42-201ENST00000362660 108 ntBASIC0.28□□□□□ -2.36
SFTPBP07988 Y_RNA.76-201ENST00000362931 109 ntBASIC0.28□□□□□ -2.36
SFTPBP07988 RNA5SP62-201ENST00000363457 110 ntBASIC0.28□□□□□ -2.36
SFTPBP07988 Y_RNA.396-201ENST00000383949 103 ntBASIC0.28□□□□□ -2.36
SFTPBP07988 SNORA20-201ENST00000384662 132 ntBASIC0.28□□□□□ -2.36
SFTPBP07988 Y_RNA.567-201ENST00000384736 106 ntBASIC0.28□□□□□ -2.36
SFTPBP07988 SNORD71-201ENST00000411292 86 ntBASIC0.28□□□□□ -2.36
SFTPBP07988 AL121914.1-201ENST00000450188 156 ntBASIC0.28□□□□□ -2.36
SFTPBP07988 MIR3152-201ENST00000579801 74 ntBASIC0.28□□□□□ -2.36
SFTPBP07988 AC011921.3-201ENST00000605540 361 ntBASIC0.28□□□□□ -2.36
SFTPBP07988 RNU6-403P-201ENST00000363163 104 ntBASIC0.27□□□□□ -2.37
SFTPBP07988 SNORD44.1-201ENST00000363202 61 ntBASIC0.27□□□□□ -2.37
SFTPBP07988 RNU6-103P-201ENST00000363686 107 ntBASIC0.27□□□□□ -2.37
SFTPBP07988 Y_RNA.352-201ENST00000365439 102 ntBASIC0.27□□□□□ -2.37
SFTPBP07988 Y_RNA.430-201ENST00000384081 110 ntBASIC0.27□□□□□ -2.37
SFTPBP07988 Y_RNA.518-201ENST00000384552 113 ntBASIC0.27□□□□□ -2.37
SFTPBP07988 MIR548F4-201ENST00000408515 105 ntBASIC0.27□□□□□ -2.37
SFTPBP07988 RNU4-43P-201ENST00000410628 137 ntBASIC0.27□□□□□ -2.37
SFTPBP07988 RNY3P16-201ENST00000516338 101 ntBASIC0.27□□□□□ -2.37
SFTPBP07988 RNU7-70P-201ENST00000516941 66 ntBASIC0.27□□□□□ -2.37
SFTPBP07988 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.27□□□□□ -2.37
SFTPBP07988 AC022523.2-201ENST00000561045 150 ntBASIC0.27□□□□□ -2.37
SFTPBP07988 AC141846.1-201ENST00000568348 142 ntBASIC0.27□□□□□ -2.37
SFTPBP07988 AC006504.6-201ENST00000590142 199 ntBASIC0.27□□□□□ -2.37
SFTPBP07988 uc_338.16-201ENST00000621804 95 ntBASIC0.27□□□□□ -2.37
SFTPBP07988 AC090625.1-201ENST00000357130 210 ntBASIC0.26□□□□□ -2.37
SFTPBP07988 Y_RNA.13-201ENST00000362403 112 ntBASIC0.26□□□□□ -2.37
SFTPBP07988 SNORA8.2-201ENST00000384372 139 ntBASIC0.26□□□□□ -2.37
SFTPBP07988 RNU6-1160P-201ENST00000384546 104 ntBASIC0.26□□□□□ -2.37
SFTPBP07988 U8.15-201ENST00000390947 134 ntBASIC0.26□□□□□ -2.37
SFTPBP07988 RNA5SP63-201ENST00000391225 112 ntBASIC0.26□□□□□ -2.37
SFTPBP07988 SNRPGP12-201ENST00000449481 213 ntBASIC0.26□□□□□ -2.37
SFTPBP07988 AC023932.2-201ENST00000603176 175 ntBASIC0.26□□□□□ -2.37
SFTPBP07988 SNORA22.1-201ENST00000362701 134 ntBASIC0.25□□□□□ -2.37
SFTPBP07988 Y_RNA.292-201ENST00000364904 97 ntBASIC0.25□□□□□ -2.37
SFTPBP07988 Y_RNA.308-201ENST00000365043 101 ntBASIC0.25□□□□□ -2.37
SFTPBP07988 MIR644A-201ENST00000385262 94 ntBASIC0.25□□□□□ -2.37
SFTPBP07988 RNU2-38P-201ENST00000410856 79 ntBASIC0.25□□□□□ -2.37
SFTPBP07988 MIR4744-201ENST00000581563 82 ntBASIC0.25□□□□□ -2.37
SFTPBP07988 AC021613.1-201ENST00000623880 111 ntBASIC0.25□□□□□ -2.37
SFTPBP07988 MIR6841-201ENST00000637129 72 ntBASIC0.25□□□□□ -2.37
SFTPBP07988 SNORD118-201ENST00000363593 134 ntBASIC0.24□□□□□ -2.37
SFTPBP07988 RNU6-978P-201ENST00000364371 103 ntBASIC0.24□□□□□ -2.37
SFTPBP07988 RNU4-16P-201ENST00000364737 141 ntBASIC0.24□□□□□ -2.37
SFTPBP07988 Y_RNA.280-201ENST00000364765 112 ntBASIC0.24□□□□□ -2.37
SFTPBP07988 Y_RNA.326-201ENST00000365176 113 ntBASIC0.24□□□□□ -2.37
SFTPBP07988 RNU6-1327P-201ENST00000365302 105 ntBASIC0.24□□□□□ -2.37
SFTPBP07988 AC108740.1-201ENST00000498629 225 ntBASIC0.24□□□□□ -2.37
SFTPBP07988 SNORD116-25-201ENST00000516517 92 ntBASIC0.24□□□□□ -2.37
SFTPBP07988 Y_RNA.178-201ENST00000363832 102 ntBASIC0.23□□□□□ -2.37
SFTPBP07988 RNU4-67P-201ENST00000364569 141 ntBASIC0.23□□□□□ -2.37
SFTPBP07988 SNORA72.6-201ENST00000384520 129 ntBASIC0.23□□□□□ -2.37
SFTPBP07988 MIR606-201ENST00000384851 96 ntBASIC0.23□□□□□ -2.37
SFTPBP07988 RNU6-578P-201ENST00000390980 103 ntBASIC0.23□□□□□ -2.37
SFTPBP07988 Y_RNA.588-201ENST00000391254 102 ntBASIC0.23□□□□□ -2.37
SFTPBP07988 RNU6-493P-201ENST00000391321 108 ntBASIC0.23□□□□□ -2.37
SFTPBP07988 RNU6-469P-201ENST00000516253 101 ntBASIC0.23□□□□□ -2.37
SFTPBP07988 AP003327.1-201ENST00000529684 127 ntBASIC0.23□□□□□ -2.37
SFTPBP07988 MIR378D2-201ENST00000580636 98 ntBASIC0.23□□□□□ -2.37
SFTPBP07988 AC008737.2-201ENST00000599446 118 ntBASIC0.23□□□□□ -2.37
SFTPBP07988 RNU2-4P-201ENST00000606190 192 ntBASIC0.23□□□□□ -2.37
SFTPBP07988 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.23□□□□□ -2.37
SFTPBP07988 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 185.4 ms