Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 AL121914.1-201ENST00000450188 156 ntBASIC0.49□□□□□ -2.33
MMP1P03956 snoU13.2-201ENST00000459201 104 ntBASIC0.49□□□□□ -2.33
MMP1P03956 MIR4771-2-201ENST00000577758 74 ntBASIC0.49□□□□□ -2.33
MMP1P03956 MIR4771-1-201ENST00000582617 74 ntBASIC0.49□□□□□ -2.33
MMP1P03956 U4.1-201ENST00000620349 87 ntBASIC0.49□□□□□ -2.33
MMP1P03956 SNORD38B-202ENST00000625943 69 ntBASIC0.49□□□□□ -2.33
MMP1P03956 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
MMP1P03956 AC010332.2-201ENST00000613083 1904 ntBASIC0.48□□□□□ -2.33
MMP1P03956 MIR342-201ENST00000362212 99 ntBASIC0.48□□□□□ -2.33
MMP1P03956 Y_RNA.121-201ENST00000363309 113 ntBASIC0.48□□□□□ -2.33
MMP1P03956 RNA5SP62-201ENST00000363457 110 ntBASIC0.48□□□□□ -2.33
MMP1P03956 Y_RNA.351-201ENST00000365436 96 ntBASIC0.48□□□□□ -2.33
MMP1P03956 RNU6-597P-201ENST00000365620 102 ntBASIC0.48□□□□□ -2.33
MMP1P03956 Y_RNA.433-201ENST00000384089 102 ntBASIC0.48□□□□□ -2.33
MMP1P03956 MIR588-201ENST00000384900 83 ntBASIC0.48□□□□□ -2.33
MMP1P03956 RNU1-119P-201ENST00000391122 165 ntBASIC0.48□□□□□ -2.33
MMP1P03956 MIR1302-3-201ENST00000408128 138 ntBASIC0.48□□□□□ -2.33
MMP1P03956 RNU6-1023P-201ENST00000516137 106 ntBASIC0.48□□□□□ -2.33
MMP1P03956 SCARNA15-202ENST00000516881 127 ntBASIC0.48□□□□□ -2.33
MMP1P03956 RNU6-111P-201ENST00000517179 105 ntBASIC0.48□□□□□ -2.33
MMP1P03956 AC018659.1-201ENST00000551083 169 ntBASIC0.48□□□□□ -2.33
MMP1P03956 AC011195.1-201ENST00000578177 177 ntBASIC0.48□□□□□ -2.33
MMP1P03956 MIR4804-201ENST00000581683 73 ntBASIC0.48□□□□□ -2.33
MMP1P03956 MIR4676-201ENST00000583078 72 ntBASIC0.48□□□□□ -2.33
MMP1P03956 AL353621.2-201ENST00000605340 133 ntBASIC0.48□□□□□ -2.33
MMP1P03956 MIR6717-201ENST00000622747 73 ntBASIC0.48□□□□□ -2.33
MMP1P03956 AC091932.4-201ENST00000623386 200 ntBASIC0.48□□□□□ -2.33
MMP1P03956 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.47□□□□□ -2.33
MMP1P03956 MIR30D-201ENST00000362283 70 ntBASIC0.47□□□□□ -2.33
MMP1P03956 Y_RNA.307-201ENST00000365022 117 ntBASIC0.47□□□□□ -2.33
MMP1P03956 RNY1P8-201ENST00000383970 114 ntBASIC0.47□□□□□ -2.33
MMP1P03956 Y_RNA.478-201ENST00000384358 107 ntBASIC0.47□□□□□ -2.33
MMP1P03956 Y_RNA.571-201ENST00000384753 98 ntBASIC0.47□□□□□ -2.33
MMP1P03956 RNU6-1165P-201ENST00000410119 107 ntBASIC0.47□□□□□ -2.33
MMP1P03956 Y_RNA.618-201ENST00000410949 107 ntBASIC0.47□□□□□ -2.33
MMP1P03956 MIR378D2-201ENST00000580636 98 ntBASIC0.47□□□□□ -2.33
MMP1P03956 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
MMP1P03956 RNU6-702P-201ENST00000364982 107 ntBASIC0.46□□□□□ -2.34
MMP1P03956 RNU6-945P-201ENST00000383947 107 ntBASIC0.46□□□□□ -2.34
MMP1P03956 Y_RNA.412-201ENST00000384001 104 ntBASIC0.46□□□□□ -2.34
MMP1P03956 Y_RNA.452-201ENST00000384202 108 ntBASIC0.46□□□□□ -2.34
MMP1P03956 SNORA50A-201ENST00000384225 134 ntBASIC0.46□□□□□ -2.34
MMP1P03956 RNU6-196P-201ENST00000384315 107 ntBASIC0.46□□□□□ -2.34
MMP1P03956 MIR520F-201ENST00000384824 87 ntBASIC0.46□□□□□ -2.34
MMP1P03956 MIR573-201ENST00000384964 99 ntBASIC0.46□□□□□ -2.34
MMP1P03956 MIR520H-201ENST00000385126 88 ntBASIC0.46□□□□□ -2.34
MMP1P03956 RNU6-918P-201ENST00000391219 106 ntBASIC0.46□□□□□ -2.34
MMP1P03956 SNORA79-201ENST00000408376 140 ntBASIC0.46□□□□□ -2.34
MMP1P03956 SEPT7P4-201ENST00000437076 306 ntBASIC0.46□□□□□ -2.34
MMP1P03956 RNU7-56P-201ENST00000458744 62 ntBASIC0.46□□□□□ -2.34
MMP1P03956 Y_RNA.797-201ENST00000515977 94 ntBASIC0.46□□□□□ -2.34
MMP1P03956 RNU4-71P-201ENST00000516258 113 ntBASIC0.46□□□□□ -2.34
MMP1P03956 MRPS18CP4-201ENST00000535821 231 ntBASIC0.46□□□□□ -2.34
MMP1P03956 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.46□□□□□ -2.34
MMP1P03956 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.46□□□□□ -2.34
MMP1P03956 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.46□□□□□ -2.34
MMP1P03956 Y_RNA.182-201ENST00000363880 111 ntBASIC0.45□□□□□ -2.34
MMP1P03956 RNU6-275P-201ENST00000364910 107 ntBASIC0.45□□□□□ -2.34
MMP1P03956 RNU6-643P-201ENST00000384018 107 ntBASIC0.45□□□□□ -2.34
MMP1P03956 MIR18B-201ENST00000454574 71 ntBASIC0.45□□□□□ -2.34
MMP1P03956 RNU6-977P-201ENST00000516411 103 ntBASIC0.45□□□□□ -2.34
MMP1P03956 SNORD116-25-201ENST00000516517 92 ntBASIC0.45□□□□□ -2.34
MMP1P03956 SNORA62.5-201ENST00000516634 120 ntBASIC0.45□□□□□ -2.34
MMP1P03956 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.45□□□□□ -2.34
MMP1P03956 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.45□□□□□ -2.34
MMP1P03956 MIR3149-201ENST00000584629 83 ntBASIC0.45□□□□□ -2.34
MMP1P03956 U6.106-201ENST00000636360 105 ntBASIC0.45□□□□□ -2.34
MMP1P03956 MIR6841-201ENST00000637129 72 ntBASIC0.45□□□□□ -2.34
MMP1P03956 AL596211.1-201ENST00000569873 2277 ntBASIC0.44□□□□□ -2.34
MMP1P03956 RNU6-47P-201ENST00000383866 107 ntBASIC0.44□□□□□ -2.34
MMP1P03956 RNU6-1336P-201ENST00000383886 109 ntBASIC0.44□□□□□ -2.34
MMP1P03956 Y_RNA.430-201ENST00000384081 110 ntBASIC0.44□□□□□ -2.34
MMP1P03956 MIR624-201ENST00000385217 97 ntBASIC0.44□□□□□ -2.34
MMP1P03956 RNU6-1319P-201ENST00000390855 104 ntBASIC0.44□□□□□ -2.34
MMP1P03956 RNU6-747P-201ENST00000390928 104 ntBASIC0.44□□□□□ -2.34
MMP1P03956 RNU6-241P-201ENST00000391148 104 ntBASIC0.44□□□□□ -2.34
MMP1P03956 RNU6-177P-201ENST00000411257 104 ntBASIC0.44□□□□□ -2.34
MMP1P03956 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.44□□□□□ -2.34
MMP1P03956 RNU7-80P-201ENST00000459562 61 ntBASIC0.44□□□□□ -2.34
MMP1P03956 MIR4514-201ENST00000581410 57 ntBASIC0.44□□□□□ -2.34
MMP1P03956 AC023932.2-201ENST00000603176 175 ntBASIC0.44□□□□□ -2.34
MMP1P03956 AC008608.1-201ENST00000603910 127 ntBASIC0.44□□□□□ -2.34
MMP1P03956 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.44□□□□□ -2.34
MMP1P03956 MIR302B-201ENST00000362188 73 ntBASIC0.43□□□□□ -2.34
MMP1P03956 Y_RNA.75-201ENST00000362927 97 ntBASIC0.43□□□□□ -2.34
MMP1P03956 SNORD18A-201ENST00000363753 72 ntBASIC0.43□□□□□ -2.34
MMP1P03956 SNORA20.1-201ENST00000364790 130 ntBASIC0.43□□□□□ -2.34
MMP1P03956 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
MMP1P03956 RNU6-463P-201ENST00000384340 107 ntBASIC0.43□□□□□ -2.34
MMP1P03956 RNU4-70P-201ENST00000384579 139 ntBASIC0.43□□□□□ -2.34
MMP1P03956 RNA5SP222-201ENST00000411039 105 ntBASIC0.43□□□□□ -2.34
MMP1P03956 RNU7-185P-201ENST00000459215 60 ntBASIC0.43□□□□□ -2.34
MMP1P03956 RNU6-1149P-201ENST00000516810 97 ntBASIC0.43□□□□□ -2.34
MMP1P03956 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.43□□□□□ -2.34
MMP1P03956 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.43□□□□□ -2.34
MMP1P03956 MIR411-201ENST00000362239 96 ntBASIC0.42□□□□□ -2.34
MMP1P03956 Y_RNA.435-201ENST00000384095 112 ntBASIC0.42□□□□□ -2.34
MMP1P03956 RNU6-1237P-201ENST00000384777 107 ntBASIC0.42□□□□□ -2.34
MMP1P03956 MIR125B2-201ENST00000385128 89 ntBASIC0.42□□□□□ -2.34
MMP1P03956 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 723.9 ms