Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.3□□□□□ -2.2
COL2A1P02458 Y_RNA.369-201ENST00000365568 117 ntBASIC1.3□□□□□ -2.2
COL2A1P02458 RNU6-573P-201ENST00000383938 106 ntBASIC1.3□□□□□ -2.2
COL2A1P02458 SNORA27-201ENST00000384323 126 ntBASIC1.3□□□□□ -2.2
COL2A1P02458 RNU1-148P-201ENST00000384472 162 ntBASIC1.3□□□□□ -2.2
COL2A1P02458 Y_RNA.531-201ENST00000384589 121 ntBASIC1.3□□□□□ -2.2
COL2A1P02458 RNU6-1190P-201ENST00000410811 104 ntBASIC1.3□□□□□ -2.2
COL2A1P02458 AL591704.2-201ENST00000421658 181 ntBASIC1.3□□□□□ -2.2
COL2A1P02458 RNU6-162P-201ENST00000516228 103 ntBASIC1.3□□□□□ -2.2
COL2A1P02458 SNORA72.7-201ENST00000516349 94 ntBASIC1.3□□□□□ -2.2
COL2A1P02458 Y_RNA.694-201ENST00000516677 117 ntBASIC1.3□□□□□ -2.2
COL2A1P02458 AC026271.5-201ENST00000577873 130 ntBASIC1.3□□□□□ -2.2
COL2A1P02458 MIR548Z-201ENST00000584743 97 ntBASIC1.3□□□□□ -2.2
COL2A1P02458 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
COL2A1P02458 RNU6-766P-201ENST00000362478 107 ntBASIC1.29□□□□□ -2.2
COL2A1P02458 Y_RNA.213-201ENST00000364178 111 ntBASIC1.29□□□□□ -2.2
COL2A1P02458 SNORD38C-201ENST00000384381 69 ntBASIC1.29□□□□□ -2.2
COL2A1P02458 MIR605-201ENST00000385078 83 ntBASIC1.29□□□□□ -2.2
COL2A1P02458 SNORD28B-201ENST00000390993 75 ntBASIC1.29□□□□□ -2.2
COL2A1P02458 RNU11-5P-201ENST00000391216 129 ntBASIC1.29□□□□□ -2.2
COL2A1P02458 MIR1267-201ENST00000408723 78 ntBASIC1.29□□□□□ -2.2
COL2A1P02458 RNU7-67P-201ENST00000459003 62 ntBASIC1.29□□□□□ -2.2
COL2A1P02458 RNA5SP57-201ENST00000459463 123 ntBASIC1.29□□□□□ -2.2
COL2A1P02458 AC055731.1-201ENST00000474387 401 ntBASIC1.29□□□□□ -2.2
COL2A1P02458 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.29□□□□□ -2.2
COL2A1P02458 AC004812.1-201ENST00000540773 146 ntBASIC1.29□□□□□ -2.2
COL2A1P02458 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.29□□□□□ -2.2
COL2A1P02458 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
COL2A1P02458 Y_RNA.49-201ENST00000362714 112 ntBASIC1.28□□□□□ -2.2
COL2A1P02458 RNU6-1019P-201ENST00000364424 107 ntBASIC1.28□□□□□ -2.2
COL2A1P02458 Y_RNA.336-201ENST00000365307 109 ntBASIC1.28□□□□□ -2.2
COL2A1P02458 MIR548D2-201ENST00000384955 97 ntBASIC1.28□□□□□ -2.2
COL2A1P02458 RNU6-816P-201ENST00000390914 107 ntBASIC1.28□□□□□ -2.2
COL2A1P02458 RNU6-1268P-201ENST00000391214 107 ntBASIC1.28□□□□□ -2.2
COL2A1P02458 RNU6-1239P-201ENST00000391310 107 ntBASIC1.28□□□□□ -2.2
COL2A1P02458 RNU6-795P-201ENST00000516323 103 ntBASIC1.28□□□□□ -2.2
COL2A1P02458 SNORA40.13-201ENST00000516379 120 ntBASIC1.28□□□□□ -2.2
COL2A1P02458 MIR4287-201ENST00000579398 78 ntBASIC1.28□□□□□ -2.2
COL2A1P02458 MIR548AR-201ENST00000582191 57 ntBASIC1.28□□□□□ -2.2
COL2A1P02458 AC087685.1-201ENST00000587507 141 ntBASIC1.28□□□□□ -2.2
COL2A1P02458 AC211469.2-201ENST00000605461 205 ntBASIC1.28□□□□□ -2.2
COL2A1P02458 MIR4791-201ENST00000607666 84 ntBASIC1.28□□□□□ -2.2
COL2A1P02458 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.28□□□□□ -2.2
COL2A1P02458 AC087741.2-201ENST00000619415 172 ntBASIC1.28□□□□□ -2.2
COL2A1P02458 Y_RNA.115-201ENST00000363272 98 ntBASIC1.27□□□□□ -2.21
COL2A1P02458 U8.5-201ENST00000364528 136 ntBASIC1.27□□□□□ -2.21
COL2A1P02458 Y_RNA.470-201ENST00000384307 117 ntBASIC1.27□□□□□ -2.21
COL2A1P02458 MIR193B-201ENST00000384907 83 ntBASIC1.27□□□□□ -2.21
COL2A1P02458 MIR1283-2-201ENST00000408621 87 ntBASIC1.27□□□□□ -2.21
COL2A1P02458 SNORA7.5-201ENST00000410672 110 ntBASIC1.27□□□□□ -2.21
COL2A1P02458 RNU7-34P-201ENST00000459394 64 ntBASIC1.27□□□□□ -2.21
COL2A1P02458 RNU7-80P-201ENST00000459562 61 ntBASIC1.27□□□□□ -2.21
COL2A1P02458 AC113410.1-201ENST00000505029 247 ntBASIC1.27□□□□□ -2.21
COL2A1P02458 RNA5SP437-201ENST00000517249 129 ntBASIC1.27□□□□□ -2.21
COL2A1P02458 MIR4295-201ENST00000585286 85 ntBASIC1.27□□□□□ -2.21
COL2A1P02458 AL442644.1-201ENST00000454390 3105 ntBASIC1.27□□□□□ -2.21
COL2A1P02458 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.26□□□□□ -2.21
COL2A1P02458 Y_RNA.155-201ENST00000363632 101 ntBASIC1.26□□□□□ -2.21
COL2A1P02458 Y_RNA.323-201ENST00000365157 109 ntBASIC1.26□□□□□ -2.21
COL2A1P02458 Y_RNA.370-201ENST00000365589 108 ntBASIC1.26□□□□□ -2.21
COL2A1P02458 SNORA32-201ENST00000384072 121 ntBASIC1.26□□□□□ -2.21
COL2A1P02458 MIR515-2-201ENST00000384883 83 ntBASIC1.26□□□□□ -2.21
COL2A1P02458 MIR515-1-201ENST00000384884 83 ntBASIC1.26□□□□□ -2.21
COL2A1P02458 RNY4P29-201ENST00000410801 97 ntBASIC1.26□□□□□ -2.21
COL2A1P02458 RNA5SP501-201ENST00000410990 112 ntBASIC1.26□□□□□ -2.21
COL2A1P02458 AC069257.2-201ENST00000441819 155 ntBASIC1.26□□□□□ -2.21
COL2A1P02458 PGBD4P5-201ENST00000445958 426 ntBASIC1.26□□□□□ -2.21
COL2A1P02458 RNU6-970P-201ENST00000516312 107 ntBASIC1.26□□□□□ -2.21
COL2A1P02458 MIR1273G-201ENST00000577677 100 ntBASIC1.26□□□□□ -2.21
COL2A1P02458 AC005786.1-201ENST00000588553 154 ntBASIC1.26□□□□□ -2.21
COL2A1P02458 AC078899.2-201ENST00000595282 212 ntBASIC1.26□□□□□ -2.21
COL2A1P02458 RNA5SP173-201ENST00000364857 136 ntBASIC1.25□□□□□ -2.21
COL2A1P02458 RNU6-424P-201ENST00000384367 105 ntBASIC1.25□□□□□ -2.21
COL2A1P02458 MIR518A2-201ENST00000384966 87 ntBASIC1.25□□□□□ -2.21
COL2A1P02458 SNORA26.2-201ENST00000390922 122 ntBASIC1.25□□□□□ -2.21
COL2A1P02458 RNA5SP144-201ENST00000410846 116 ntBASIC1.25□□□□□ -2.21
COL2A1P02458 AC087499.4-201ENST00000448505 178 ntBASIC1.25□□□□□ -2.21
COL2A1P02458 RNU7-28P-201ENST00000516759 62 ntBASIC1.25□□□□□ -2.21
COL2A1P02458 RNU2-19P-201ENST00000517288 84 ntBASIC1.25□□□□□ -2.21
COL2A1P02458 AC069114.2-201ENST00000604699 304 ntBASIC1.25□□□□□ -2.21
COL2A1P02458 AC062037.1-201ENST00000605302 128 ntBASIC1.25□□□□□ -2.21
COL2A1P02458 RNU6-94P-201ENST00000607728 107 ntBASIC1.25□□□□□ -2.21
COL2A1P02458 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.25□□□□□ -2.21
COL2A1P02458 AC021613.1-201ENST00000623880 111 ntBASIC1.25□□□□□ -2.21
COL2A1P02458 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.24□□□□□ -2.21
COL2A1P02458 MIR494-201ENST00000349529 81 ntBASIC1.24□□□□□ -2.21
COL2A1P02458 RNY3P2-201ENST00000362918 102 ntBASIC1.24□□□□□ -2.21
COL2A1P02458 Y_RNA.107-201ENST00000363190 121 ntBASIC1.24□□□□□ -2.21
COL2A1P02458 Y_RNA.242-201ENST00000364473 110 ntBASIC1.24□□□□□ -2.21
COL2A1P02458 RNU6-616P-201ENST00000384353 107 ntBASIC1.24□□□□□ -2.21
COL2A1P02458 RNU6-1031P-201ENST00000384773 107 ntBASIC1.24□□□□□ -2.21
COL2A1P02458 RNU6-1237P-201ENST00000384777 107 ntBASIC1.24□□□□□ -2.21
COL2A1P02458 MIR526A1-201ENST00000384897 85 ntBASIC1.24□□□□□ -2.21
COL2A1P02458 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
COL2A1P02458 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
COL2A1P02458 RNU6-913P-201ENST00000390913 95 ntBASIC1.24□□□□□ -2.21
COL2A1P02458 AL034345.1-201ENST00000407768 123 ntBASIC1.24□□□□□ -2.21
COL2A1P02458 MIR1285-1-201ENST00000408593 84 ntBASIC1.24□□□□□ -2.21
COL2A1P02458 RNU6-592P-201ENST00000411333 103 ntBASIC1.24□□□□□ -2.21
COL2A1P02458 AL035398.1-201ENST00000430869 322 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms