Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RNU6-998P-201ENST00000515894 101 ntBASIC0.64□□□□□ -2.31
PDGFBP01127 RNU7-70P-201ENST00000516941 66 ntBASIC0.64□□□□□ -2.31
PDGFBP01127 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.64□□□□□ -2.31
PDGFBP01127 MIR4308-201ENST00000580634 81 ntBASIC0.64□□□□□ -2.31
PDGFBP01127 MIR4264-201ENST00000583520 66 ntBASIC0.64□□□□□ -2.31
PDGFBP01127 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.64□□□□□ -2.31
PDGFBP01127 MIR8055-201ENST00000610739 97 ntBASIC0.64□□□□□ -2.31
PDGFBP01127 MIR6740-201ENST00000618268 113 ntBASIC0.64□□□□□ -2.31
PDGFBP01127 RNU6-103P-201ENST00000363686 107 ntBASIC0.63□□□□□ -2.31
PDGFBP01127 Y_RNA.410-201ENST00000383992 113 ntBASIC0.63□□□□□ -2.31
PDGFBP01127 Y_RNA.518-201ENST00000384552 113 ntBASIC0.63□□□□□ -2.31
PDGFBP01127 MIR520H-201ENST00000385126 88 ntBASIC0.63□□□□□ -2.31
PDGFBP01127 SNORD105-201ENST00000386910 85 ntBASIC0.63□□□□□ -2.31
PDGFBP01127 MIR1827-201ENST00000408549 66 ntBASIC0.63□□□□□ -2.31
PDGFBP01127 RNU6-602P-201ENST00000411155 105 ntBASIC0.63□□□□□ -2.31
PDGFBP01127 MIR3149-201ENST00000584629 83 ntBASIC0.63□□□□□ -2.31
PDGFBP01127 AC020891.4-201ENST00000605745 93 ntBASIC0.63□□□□□ -2.31
PDGFBP01127 Y_RNA.193-201ENST00000363979 102 ntBASIC0.62□□□□□ -2.31
PDGFBP01127 RNU6-597P-201ENST00000365620 102 ntBASIC0.62□□□□□ -2.31
PDGFBP01127 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
PDGFBP01127 Y_RNA.521-201ENST00000384560 114 ntBASIC0.62□□□□□ -2.31
PDGFBP01127 Y_RNA.618-201ENST00000410949 107 ntBASIC0.62□□□□□ -2.31
PDGFBP01127 MIR378D2-201ENST00000580636 98 ntBASIC0.62□□□□□ -2.31
PDGFBP01127 Y_RNA.20-201ENST00000362479 113 ntBASIC0.61□□□□□ -2.31
PDGFBP01127 RNU4-16P-201ENST00000364737 141 ntBASIC0.61□□□□□ -2.31
PDGFBP01127 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
PDGFBP01127 RNY1P8-201ENST00000383970 114 ntBASIC0.61□□□□□ -2.31
PDGFBP01127 RNU6-733P-201ENST00000410759 104 ntBASIC0.61□□□□□ -2.31
PDGFBP01127 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.61□□□□□ -2.31
PDGFBP01127 SNORD116-25-201ENST00000516517 92 ntBASIC0.61□□□□□ -2.31
PDGFBP01127 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.61□□□□□ -2.31
PDGFBP01127 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.61□□□□□ -2.31
PDGFBP01127 MIR4514-201ENST00000581410 57 ntBASIC0.61□□□□□ -2.31
PDGFBP01127 MIR5087-201ENST00000635826 76 ntBASIC0.61□□□□□ -2.31
PDGFBP01127 U6.106-201ENST00000636360 105 ntBASIC0.61□□□□□ -2.31
PDGFBP01127 Z97988.1-201ENST00000637697 135 ntBASIC0.61□□□□□ -2.31
PDGFBP01127 MT-TN-201ENST00000387400 73 ntBASIC0.6□□□□□ -2.31
PDGFBP01127 RNU1-119P-201ENST00000391122 165 ntBASIC0.6□□□□□ -2.31
PDGFBP01127 RNU6-1165P-201ENST00000410119 107 ntBASIC0.6□□□□□ -2.31
PDGFBP01127 MIR4676-201ENST00000583078 72 ntBASIC0.6□□□□□ -2.31
PDGFBP01127 Z83818.1-201ENST00000603584 150 ntBASIC0.6□□□□□ -2.31
PDGFBP01127 MIR6717-201ENST00000622747 73 ntBASIC0.6□□□□□ -2.31
PDGFBP01127 AC091932.4-201ENST00000623386 200 ntBASIC0.6□□□□□ -2.31
PDGFBP01127 RNU6-369P-201ENST00000362515 102 ntBASIC0.59□□□□□ -2.31
PDGFBP01127 RNU6-47P-201ENST00000383866 107 ntBASIC0.59□□□□□ -2.31
PDGFBP01127 MTND5P15-201ENST00000434246 349 ntBASIC0.59□□□□□ -2.31
PDGFBP01127 RPL39P25-201ENST00000449384 154 ntBASIC0.59□□□□□ -2.31
PDGFBP01127 RNU7-80P-201ENST00000459562 61 ntBASIC0.59□□□□□ -2.31
PDGFBP01127 AC022559.1-201ENST00000520905 205 ntBASIC0.59□□□□□ -2.31
PDGFBP01127 AC018659.1-201ENST00000551083 169 ntBASIC0.59□□□□□ -2.31
PDGFBP01127 MIR5197-201ENST00000583721 112 ntBASIC0.59□□□□□ -2.31
PDGFBP01127 MIR4719-201ENST00000585233 84 ntBASIC0.59□□□□□ -2.31
PDGFBP01127 AC097639.2-201ENST00000603159 172 ntBASIC0.59□□□□□ -2.31
PDGFBP01127 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.32
PDGFBP01127 Y_RNA.144-201ENST00000363521 113 ntBASIC0.58□□□□□ -2.32
PDGFBP01127 RNU6-580P-201ENST00000365159 107 ntBASIC0.58□□□□□ -2.32
PDGFBP01127 RNU6-643P-201ENST00000384018 107 ntBASIC0.58□□□□□ -2.32
PDGFBP01127 Y_RNA.478-201ENST00000384358 107 ntBASIC0.58□□□□□ -2.32
PDGFBP01127 RNU6-364P-201ENST00000384387 107 ntBASIC0.58□□□□□ -2.32
PDGFBP01127 RNA5SP237-201ENST00000410414 113 ntBASIC0.58□□□□□ -2.32
PDGFBP01127 AC244098.3-201ENST00000424803 96 ntBASIC0.58□□□□□ -2.32
PDGFBP01127 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.58□□□□□ -2.32
PDGFBP01127 RNU6-1023P-201ENST00000516137 106 ntBASIC0.58□□□□□ -2.32
PDGFBP01127 RNU4-71P-201ENST00000516258 113 ntBASIC0.58□□□□□ -2.32
PDGFBP01127 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.58□□□□□ -2.32
PDGFBP01127 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
PDGFBP01127 MIR377-201ENST00000362145 69 ntBASIC0.57□□□□□ -2.32
PDGFBP01127 Y_RNA.83-201ENST00000363005 113 ntBASIC0.57□□□□□ -2.32
PDGFBP01127 Y_RNA.452-201ENST00000384202 108 ntBASIC0.57□□□□□ -2.32
PDGFBP01127 RNU6-463P-201ENST00000384340 107 ntBASIC0.57□□□□□ -2.32
PDGFBP01127 Y_RNA.542-201ENST00000384641 111 ntBASIC0.57□□□□□ -2.32
PDGFBP01127 SNORA20-201ENST00000384662 132 ntBASIC0.57□□□□□ -2.32
PDGFBP01127 snoU13.2-201ENST00000459201 104 ntBASIC0.57□□□□□ -2.32
PDGFBP01127 RNU4-54P-201ENST00000516428 129 ntBASIC0.57□□□□□ -2.32
PDGFBP01127 RNA5SP285-201ENST00000516619 119 ntBASIC0.57□□□□□ -2.32
PDGFBP01127 RNU6-1149P-201ENST00000516810 97 ntBASIC0.57□□□□□ -2.32
PDGFBP01127 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
PDGFBP01127 MIR4804-201ENST00000581683 73 ntBASIC0.57□□□□□ -2.32
PDGFBP01127 AL162730.1-201ENST00000605734 292 ntBASIC0.57□□□□□ -2.32
PDGFBP01127 MTND5P32-201ENST00000560711 1802 ntBASIC0.57□□□□□ -2.32
PDGFBP01127 Y_RNA.200-201ENST00000364018 102 ntBASIC0.56□□□□□ -2.32
PDGFBP01127 RNU6-978P-201ENST00000364371 103 ntBASIC0.56□□□□□ -2.32
PDGFBP01127 Y_RNA.454-201ENST00000384224 113 ntBASIC0.56□□□□□ -2.32
PDGFBP01127 RNU6-679P-201ENST00000391003 106 ntBASIC0.56□□□□□ -2.32
PDGFBP01127 MIR1257-201ENST00000408490 117 ntBASIC0.56□□□□□ -2.32
PDGFBP01127 SNORD93-201ENST00000408813 74 ntBASIC0.56□□□□□ -2.32
PDGFBP01127 RNU7-185P-201ENST00000459215 60 ntBASIC0.56□□□□□ -2.32
PDGFBP01127 RNU7-156P-201ENST00000517214 74 ntBASIC0.56□□□□□ -2.32
PDGFBP01127 AC243829.6-201ENST00000612652 106 ntBASIC0.56□□□□□ -2.32
PDGFBP01127 SNORA25.7-201ENST00000364375 127 ntBASIC0.55□□□□□ -2.32
PDGFBP01127 SNORA26.6-201ENST00000391256 115 ntBASIC0.55□□□□□ -2.32
PDGFBP01127 MIR938-201ENST00000401216 83 ntBASIC0.55□□□□□ -2.32
PDGFBP01127 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.55□□□□□ -2.32
PDGFBP01127 RNU4-43P-201ENST00000410628 137 ntBASIC0.55□□□□□ -2.32
PDGFBP01127 AC004817.2-201ENST00000561794 651 ntBASIC0.55□□□□□ -2.32
PDGFBP01127 MIR3152-201ENST00000579801 74 ntBASIC0.55□□□□□ -2.32
PDGFBP01127 AC008608.1-201ENST00000603910 127 ntBASIC0.55□□□□□ -2.32
PDGFBP01127 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.55□□□□□ -2.32
PDGFBP01127 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.55□□□□□ -2.32
PDGFBP01127 Y_RNA.121-201ENST00000363309 113 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 208.6 ms