Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 RNU6-1211P-201ENST00000459179 105 ntBASIC1.78□□□□□ -2.12
RAPGEF3O95398 AC087343.1-201ENST00000477341 475 ntBASIC1.78□□□□□ -2.12
RAPGEF3O95398 RNU6-971P-201ENST00000516920 106 ntBASIC1.78□□□□□ -2.12
RAPGEF3O95398 MIR8055-201ENST00000610739 97 ntBASIC1.78□□□□□ -2.12
RAPGEF3O95398 RNU6-508P-201ENST00000363231 103 ntBASIC1.77□□□□□ -2.13
RAPGEF3O95398 Y_RNA.430-201ENST00000384081 110 ntBASIC1.77□□□□□ -2.13
RAPGEF3O95398 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.77□□□□□ -2.13
RAPGEF3O95398 HMGN1P33-201ENST00000432945 451 ntBASIC1.77□□□□□ -2.13
RAPGEF3O95398 RNU6-80P-201ENST00000384195 107 ntBASIC1.76□□□□□ -2.13
RAPGEF3O95398 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.76□□□□□ -2.13
RAPGEF3O95398 RNU11-2P-201ENST00000516898 142 ntBASIC1.76□□□□□ -2.13
RAPGEF3O95398 AC133485.4-201ENST00000561835 220 ntBASIC1.76□□□□□ -2.13
RAPGEF3O95398 AC138907.4-201ENST00000570107 226 ntBASIC1.76□□□□□ -2.13
RAPGEF3O95398 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC1.76□□□□□ -2.13
RAPGEF3O95398 MIR548AO-201ENST00000579992 96 ntBASIC1.76□□□□□ -2.13
RAPGEF3O95398 MIR6717-201ENST00000622747 73 ntBASIC1.76□□□□□ -2.13
RAPGEF3O95398 Z97988.1-201ENST00000637697 135 ntBASIC1.76□□□□□ -2.13
RAPGEF3O95398 SNORA1.1-201ENST00000364671 133 ntBASIC1.75□□□□□ -2.13
RAPGEF3O95398 MIR758-201ENST00000390227 88 ntBASIC1.75□□□□□ -2.13
RAPGEF3O95398 SNORA26.6-201ENST00000391256 115 ntBASIC1.75□□□□□ -2.13
RAPGEF3O95398 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.75□□□□□ -2.13
RAPGEF3O95398 SNORA31.4-201ENST00000516049 129 ntBASIC1.75□□□□□ -2.13
RAPGEF3O95398 RNU6-240P-201ENST00000516098 97 ntBASIC1.75□□□□□ -2.13
RAPGEF3O95398 AP003716.2-201ENST00000528260 108 ntBASIC1.75□□□□□ -2.13
RAPGEF3O95398 Y_RNA.294-201ENST00000364916 102 ntBASIC1.74□□□□□ -2.13
RAPGEF3O95398 RNU6-1117P-201ENST00000384525 104 ntBASIC1.74□□□□□ -2.13
RAPGEF3O95398 RNU6-997P-201ENST00000384725 107 ntBASIC1.74□□□□□ -2.13
RAPGEF3O95398 RN7SKP179-201ENST00000516126 217 ntBASIC1.74□□□□□ -2.13
RAPGEF3O95398 AL137067.1-201ENST00000615933 120 ntBASIC1.74□□□□□ -2.13
RAPGEF3O95398 AL161722.3-201ENST00000605789 2983 ntBASIC1.73□□□□□ -2.13
RAPGEF3O95398 RNA5SP264-201ENST00000363115 107 ntBASIC1.73□□□□□ -2.13
RAPGEF3O95398 Y_RNA.617-201ENST00000410920 90 ntBASIC1.73□□□□□ -2.13
RAPGEF3O95398 RPS3AP1-201ENST00000413190 320 ntBASIC1.73□□□□□ -2.13
RAPGEF3O95398 AC245047.7-201ENST00000440265 293 ntBASIC1.73□□□□□ -2.13
RAPGEF3O95398 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.73□□□□□ -2.13
RAPGEF3O95398 snoU13.25-201ENST00000458945 104 ntBASIC1.73□□□□□ -2.13
RAPGEF3O95398 CYP3A52P-201ENST00000563326 91 ntBASIC1.73□□□□□ -2.13
RAPGEF3O95398 AC021443.1-201ENST00000604478 211 ntBASIC1.73□□□□□ -2.13
RAPGEF3O95398 MIR8065-201ENST00000620577 100 ntBASIC1.73□□□□□ -2.13
RAPGEF3O95398 RNA5SP457-201ENST00000363657 124 ntBASIC1.72□□□□□ -2.13
RAPGEF3O95398 RN7SKP19-201ENST00000516016 252 ntBASIC1.72□□□□□ -2.13
RAPGEF3O95398 MIR4305-201ENST00000583252 102 ntBASIC1.72□□□□□ -2.13
RAPGEF3O95398 AC108081.1-201ENST00000604358 221 ntBASIC1.72□□□□□ -2.13
RAPGEF3O95398 PRELID3BP2-201ENST00000605362 201 ntBASIC1.72□□□□□ -2.13
RAPGEF3O95398 MIR6841-201ENST00000637129 72 ntBASIC1.72□□□□□ -2.13
RAPGEF3O95398 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
RAPGEF3O95398 Y_RNA.71-201ENST00000362892 104 ntBASIC1.71□□□□□ -2.14
RAPGEF3O95398 RNU6-396P-201ENST00000365369 105 ntBASIC1.71□□□□□ -2.14
RAPGEF3O95398 Y_RNA.366-201ENST00000365540 102 ntBASIC1.71□□□□□ -2.14
RAPGEF3O95398 SNORD116-14-201ENST00000383894 92 ntBASIC1.71□□□□□ -2.14
RAPGEF3O95398 SNORD116-17-201ENST00000383929 92 ntBASIC1.71□□□□□ -2.14
RAPGEF3O95398 SNORD116-15-201ENST00000384445 92 ntBASIC1.71□□□□□ -2.14
RAPGEF3O95398 SNORD116-19-201ENST00000384729 92 ntBASIC1.71□□□□□ -2.14
RAPGEF3O95398 RNA5SP144-201ENST00000410846 116 ntBASIC1.71□□□□□ -2.14
RAPGEF3O95398 AL022718.1-201ENST00000412004 84 ntBASIC1.71□□□□□ -2.14
RAPGEF3O95398 AC008267.6-201ENST00000441664 139 ntBASIC1.71□□□□□ -2.14
RAPGEF3O95398 RPS29P23-201ENST00000458635 123 ntBASIC1.71□□□□□ -2.14
RAPGEF3O95398 RNU7-45P-201ENST00000459460 63 ntBASIC1.71□□□□□ -2.14
RAPGEF3O95398 RNU6-62P-201ENST00000516526 102 ntBASIC1.71□□□□□ -2.14
RAPGEF3O95398 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.71□□□□□ -2.14
RAPGEF3O95398 HSPE1P19-201ENST00000603327 295 ntBASIC1.71□□□□□ -2.14
RAPGEF3O95398 AC211469.2-201ENST00000605461 205 ntBASIC1.71□□□□□ -2.14
RAPGEF3O95398 MIR103A2-201ENST00000362154 78 ntBASIC1.7□□□□□ -2.14
RAPGEF3O95398 SNORA22.1-201ENST00000362701 134 ntBASIC1.7□□□□□ -2.14
RAPGEF3O95398 SNORA25.3-201ENST00000363205 127 ntBASIC1.7□□□□□ -2.14
RAPGEF3O95398 Y_RNA.218-201ENST00000364218 104 ntBASIC1.7□□□□□ -2.14
RAPGEF3O95398 RNU4-16P-201ENST00000364737 141 ntBASIC1.7□□□□□ -2.14
RAPGEF3O95398 SNORD38B-201ENST00000384690 67 ntBASIC1.7□□□□□ -2.14
RAPGEF3O95398 MIR1302-7-201ENST00000408841 72 ntBASIC1.7□□□□□ -2.14
RAPGEF3O95398 RNU6-1190P-201ENST00000410811 104 ntBASIC1.7□□□□□ -2.14
RAPGEF3O95398 RNA5SP136-201ENST00000410906 107 ntBASIC1.7□□□□□ -2.14
RAPGEF3O95398 MIR2115-201ENST00000516657 100 ntBASIC1.7□□□□□ -2.14
RAPGEF3O95398 MIR3973-201ENST00000579824 107 ntBASIC1.7□□□□□ -2.14
RAPGEF3O95398 SNORD38B-202ENST00000625943 69 ntBASIC1.7□□□□□ -2.14
RAPGEF3O95398 AL157777.2-201ENST00000258070 137 ntBASIC1.69□□□□□ -2.14
RAPGEF3O95398 RNU6-235P-201ENST00000362644 107 ntBASIC1.69□□□□□ -2.14
RAPGEF3O95398 Y_RNA.68-201ENST00000362881 102 ntBASIC1.69□□□□□ -2.14
RAPGEF3O95398 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.69□□□□□ -2.14
RAPGEF3O95398 RNU1-98P-201ENST00000458992 160 ntBASIC1.69□□□□□ -2.14
RAPGEF3O95398 Y_RNA.681-201ENST00000516445 113 ntBASIC1.69□□□□□ -2.14
RAPGEF3O95398 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
RAPGEF3O95398 Y_RNA.127-201ENST00000363386 109 ntBASIC1.68□□□□□ -2.14
RAPGEF3O95398 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
RAPGEF3O95398 MIR1185-1-201ENST00000408598 86 ntBASIC1.68□□□□□ -2.14
RAPGEF3O95398 RNU6-602P-201ENST00000411155 105 ntBASIC1.68□□□□□ -2.14
RAPGEF3O95398 RNU7-164P-201ENST00000459221 62 ntBASIC1.68□□□□□ -2.14
RAPGEF3O95398 AC048334.1-201ENST00000477975 159 ntBASIC1.68□□□□□ -2.14
RAPGEF3O95398 SNORA31.2-201ENST00000516019 134 ntBASIC1.68□□□□□ -2.14
RAPGEF3O95398 CYP3A137P-201ENST00000562436 69 ntBASIC1.68□□□□□ -2.14
RAPGEF3O95398 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.68□□□□□ -2.14
RAPGEF3O95398 Y_RNA.298-201ENST00000364960 107 ntBASIC1.67□□□□□ -2.14
RAPGEF3O95398 MT-TN-201ENST00000387400 73 ntBASIC1.67□□□□□ -2.14
RAPGEF3O95398 AL606753.1-201ENST00000427435 87 ntBASIC1.67□□□□□ -2.14
RAPGEF3O95398 RNU6-479P-201ENST00000516348 105 ntBASIC1.67□□□□□ -2.14
RAPGEF3O95398 RNU6-1234P-201ENST00000516877 103 ntBASIC1.67□□□□□ -2.14
RAPGEF3O95398 U2.22-201ENST00000636441 106 ntBASIC1.67□□□□□ -2.14
RAPGEF3O95398 SNORD58C-201ENST00000365223 64 ntBASIC1.66□□□□□ -2.14
RAPGEF3O95398 RNU6-22P-201ENST00000384355 107 ntBASIC1.66□□□□□ -2.14
RAPGEF3O95398 RNU6-659P-201ENST00000516454 104 ntBASIC1.66□□□□□ -2.14
RAPGEF3O95398 Y_RNA.712-201ENST00000517011 92 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms