Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 RNU6-60P-201ENST00000364792 103 ntBASIC1.49□□□□□ -2.17
VPS4BO75351 Y_RNA.298-201ENST00000364960 107 ntBASIC1.49□□□□□ -2.17
VPS4BO75351 SNORD115-20-201ENST00000365099 82 ntBASIC1.49□□□□□ -2.17
VPS4BO75351 RNU6-1081P-201ENST00000384537 107 ntBASIC1.49□□□□□ -2.17
VPS4BO75351 Y_RNA.525-201ENST00000384570 113 ntBASIC1.49□□□□□ -2.17
VPS4BO75351 MIR320A-201ENST00000385302 82 ntBASIC1.49□□□□□ -2.17
VPS4BO75351 HMGN1P33-201ENST00000432945 451 ntBASIC1.49□□□□□ -2.17
VPS4BO75351 RNU6-313P-201ENST00000516317 112 ntBASIC1.49□□□□□ -2.17
VPS4BO75351 RNU11-2P-201ENST00000516898 142 ntBASIC1.49□□□□□ -2.17
VPS4BO75351 ZNF209P-201ENST00000593450 2304 ntBASIC1.48□□□□□ -2.17
VPS4BO75351 RNA5SP264-201ENST00000363115 107 ntBASIC1.48□□□□□ -2.17
VPS4BO75351 SNORA1.1-201ENST00000364671 133 ntBASIC1.48□□□□□ -2.17
VPS4BO75351 RNU4-16P-201ENST00000364737 141 ntBASIC1.48□□□□□ -2.17
VPS4BO75351 Y_RNA.291-201ENST00000364886 113 ntBASIC1.48□□□□□ -2.17
VPS4BO75351 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.48□□□□□ -2.17
VPS4BO75351 RNU6-1154P-201ENST00000391001 104 ntBASIC1.48□□□□□ -2.17
VPS4BO75351 MIR1185-1-201ENST00000408598 86 ntBASIC1.48□□□□□ -2.17
VPS4BO75351 RNU6-602P-201ENST00000411155 105 ntBASIC1.48□□□□□ -2.17
VPS4BO75351 Y_RNA.630-201ENST00000411370 108 ntBASIC1.48□□□□□ -2.17
VPS4BO75351 RPS3AP1-201ENST00000413190 320 ntBASIC1.48□□□□□ -2.17
VPS4BO75351 AC090844.1-201ENST00000422019 156 ntBASIC1.48□□□□□ -2.17
VPS4BO75351 RNU6-947P-201ENST00000516264 106 ntBASIC1.48□□□□□ -2.17
VPS4BO75351 RNU6-1258P-201ENST00000516911 111 ntBASIC1.48□□□□□ -2.17
VPS4BO75351 MIR8065-201ENST00000620577 100 ntBASIC1.48□□□□□ -2.17
VPS4BO75351 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
VPS4BO75351 SNORA22.1-201ENST00000362701 134 ntBASIC1.47□□□□□ -2.17
VPS4BO75351 MIR517C-201ENST00000385103 95 ntBASIC1.47□□□□□ -2.17
VPS4BO75351 MIR1304-201ENST00000408243 91 ntBASIC1.47□□□□□ -2.17
VPS4BO75351 AC245047.7-201ENST00000440265 293 ntBASIC1.47□□□□□ -2.17
VPS4BO75351 RNU1-123P-201ENST00000458950 160 ntBASIC1.47□□□□□ -2.17
VPS4BO75351 RNU7-164P-201ENST00000459221 62 ntBASIC1.47□□□□□ -2.17
VPS4BO75351 COX6CP6-201ENST00000490840 228 ntBASIC1.47□□□□□ -2.17
VPS4BO75351 RNU7-123P-201ENST00000515911 60 ntBASIC1.47□□□□□ -2.17
VPS4BO75351 RNY4P20-201ENST00000516678 93 ntBASIC1.47□□□□□ -2.17
VPS4BO75351 AL645939.4-201ENST00000604495 135 ntBASIC1.47□□□□□ -2.17
VPS4BO75351 AC025166.1-201ENST00000612411 163 ntBASIC1.47□□□□□ -2.17
VPS4BO75351 Y_RNA.353-201ENST00000365440 108 ntBASIC1.46□□□□□ -2.18
VPS4BO75351 AL022718.1-201ENST00000412004 84 ntBASIC1.46□□□□□ -2.18
VPS4BO75351 RNU6-1061P-201ENST00000516530 99 ntBASIC1.46□□□□□ -2.18
VPS4BO75351 RNA5SP480-201ENST00000516840 109 ntBASIC1.46□□□□□ -2.18
VPS4BO75351 RN7SKP88-201ENST00000516847 250 ntBASIC1.46□□□□□ -2.18
VPS4BO75351 RNA5SP102-201ENST00000516865 106 ntBASIC1.46□□□□□ -2.18
VPS4BO75351 CYP3A52P-201ENST00000563326 91 ntBASIC1.46□□□□□ -2.18
VPS4BO75351 MIR4421-201ENST00000578133 69 ntBASIC1.46□□□□□ -2.18
VPS4BO75351 7SK.8-201ENST00000612110 250 ntBASIC1.46□□□□□ -2.18
VPS4BO75351 7SK.11-201ENST00000615477 250 ntBASIC1.46□□□□□ -2.18
VPS4BO75351 7SK.13-201ENST00000622040 250 ntBASIC1.46□□□□□ -2.18
VPS4BO75351 U6.95-201ENST00000636931 70 ntBASIC1.46□□□□□ -2.18
VPS4BO75351 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
VPS4BO75351 SNORA25.3-201ENST00000363205 127 ntBASIC1.45□□□□□ -2.18
VPS4BO75351 Y_RNA.346-201ENST00000365385 112 ntBASIC1.45□□□□□ -2.18
VPS4BO75351 Y_RNA.354-201ENST00000365448 111 ntBASIC1.45□□□□□ -2.18
VPS4BO75351 Y_RNA.531-201ENST00000384589 121 ntBASIC1.45□□□□□ -2.18
VPS4BO75351 AC244023.1-201ENST00000426884 112 ntBASIC1.45□□□□□ -2.18
VPS4BO75351 SNORA31.24-201ENST00000517232 57 ntBASIC1.45□□□□□ -2.18
VPS4BO75351 AC004812.1-201ENST00000540773 146 ntBASIC1.45□□□□□ -2.18
VPS4BO75351 AC242498.1-201ENST00000604134 111 ntBASIC1.45□□□□□ -2.18
VPS4BO75351 RMST_2.1-201ENST00000617263 136 ntBASIC1.45□□□□□ -2.18
VPS4BO75351 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
VPS4BO75351 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
VPS4BO75351 RNU6-834P-201ENST00000362367 110 ntBASIC1.44□□□□□ -2.18
VPS4BO75351 Y_RNA.198-201ENST00000364013 98 ntBASIC1.44□□□□□ -2.18
VPS4BO75351 SNORD38B-201ENST00000384690 67 ntBASIC1.44□□□□□ -2.18
VPS4BO75351 MT-TN-201ENST00000387400 73 ntBASIC1.44□□□□□ -2.18
VPS4BO75351 AL512326.2-201ENST00000426359 151 ntBASIC1.44□□□□□ -2.18
VPS4BO75351 AC113410.1-201ENST00000505029 247 ntBASIC1.44□□□□□ -2.18
VPS4BO75351 MIR6078-201ENST00000611069 100 ntBASIC1.44□□□□□ -2.18
VPS4BO75351 SNORD38B-202ENST00000625943 69 ntBASIC1.44□□□□□ -2.18
VPS4BO75351 MTND5P18-201ENST00000445624 1801 ntBASIC1.44□□□□□ -2.18
VPS4BO75351 Y_RNA.171-201ENST00000363760 102 ntBASIC1.43□□□□□ -2.18
VPS4BO75351 RNU6-396P-201ENST00000365369 105 ntBASIC1.43□□□□□ -2.18
VPS4BO75351 Y_RNA.528-201ENST00000384575 108 ntBASIC1.43□□□□□ -2.18
VPS4BO75351 RNU6-1104P-201ENST00000384723 104 ntBASIC1.43□□□□□ -2.18
VPS4BO75351 MIR1263-201ENST00000408324 86 ntBASIC1.43□□□□□ -2.18
VPS4BO75351 RNU6-613P-201ENST00000410412 108 ntBASIC1.43□□□□□ -2.18
VPS4BO75351 RNU6-955P-201ENST00000410497 104 ntBASIC1.43□□□□□ -2.18
VPS4BO75351 AC048334.1-201ENST00000477975 159 ntBASIC1.43□□□□□ -2.18
VPS4BO75351 MIR2115-201ENST00000516657 100 ntBASIC1.43□□□□□ -2.18
VPS4BO75351 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.43□□□□□ -2.18
VPS4BO75351 MIR6516-201ENST00000630554 81 ntBASIC1.43□□□□□ -2.18
VPS4BO75351 AL161722.3-201ENST00000605789 2983 ntBASIC1.42□□□□□ -2.18
VPS4BO75351 MIR103A2-201ENST00000362154 78 ntBASIC1.42□□□□□ -2.18
VPS4BO75351 Y_RNA.363-201ENST00000365529 113 ntBASIC1.42□□□□□ -2.18
VPS4BO75351 MT-TI-201ENST00000387365 69 ntBASIC1.42□□□□□ -2.18
VPS4BO75351 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.42□□□□□ -2.18
VPS4BO75351 RPS23P4-201ENST00000487908 423 ntBASIC1.42□□□□□ -2.18
VPS4BO75351 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.42□□□□□ -2.18
VPS4BO75351 MIR548AI-201ENST00000579940 88 ntBASIC1.42□□□□□ -2.18
VPS4BO75351 AL353770.2-201ENST00000620024 78 ntBASIC1.42□□□□□ -2.18
VPS4BO75351 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.42□□□□□ -2.18
VPS4BO75351 MIR377-201ENST00000362145 69 ntBASIC1.41□□□□□ -2.18
VPS4BO75351 RNU6-580P-201ENST00000365159 107 ntBASIC1.41□□□□□ -2.18
VPS4BO75351 RNU7-113P-201ENST00000459273 62 ntBASIC1.41□□□□□ -2.18
VPS4BO75351 SNORA31.2-201ENST00000516019 134 ntBASIC1.41□□□□□ -2.18
VPS4BO75351 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.41□□□□□ -2.18
VPS4BO75351 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.41□□□□□ -2.18
VPS4BO75351 MIR4264-201ENST00000583520 66 ntBASIC1.41□□□□□ -2.18
VPS4BO75351 Y_RNA.273-201ENST00000364703 102 ntBASIC1.4□□□□□ -2.19
VPS4BO75351 SNORD114-22-201ENST00000365423 72 ntBASIC1.4□□□□□ -2.19
VPS4BO75351 Y_RNA.470-201ENST00000384307 117 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 175.6 ms