Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.59□□□□□ -2.15
PEX1O43933 MIR3198-2-201ENST00000577868 80 ntBASIC1.59□□□□□ -2.15
PEX1O43933 MIR502-201ENST00000606349 86 ntBASIC1.59□□□□□ -2.15
PEX1O43933 MIR8065-201ENST00000620577 100 ntBASIC1.59□□□□□ -2.15
PEX1O43933 MIR8063-201ENST00000621930 81 ntBASIC1.59□□□□□ -2.15
PEX1O43933 MIR1255B1-201ENST00000636325 63 ntBASIC1.59□□□□□ -2.15
PEX1O43933 AP000648.3-201ENST00000623539 4507 ntBASIC1.59□□□□□ -2.16
PEX1O43933 AL589743.1-201ENST00000551932 2712 ntBASIC1.59□□□□□ -2.16
PEX1O43933 RNU6-602P-201ENST00000411155 105 ntBASIC1.58□□□□□ -2.16
PEX1O43933 RPS3AP1-201ENST00000413190 320 ntBASIC1.58□□□□□ -2.16
PEX1O43933 RNA5SP33-201ENST00000516687 98 ntBASIC1.58□□□□□ -2.16
PEX1O43933 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.58□□□□□ -2.16
PEX1O43933 AC068339.1-201ENST00000526965 141 ntBASIC1.58□□□□□ -2.16
PEX1O43933 RNU6-94P-201ENST00000607728 107 ntBASIC1.58□□□□□ -2.16
PEX1O43933 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
PEX1O43933 Y_RNA.163-201ENST00000363702 113 ntBASIC1.57□□□□□ -2.16
PEX1O43933 RNU6-342P-201ENST00000384521 104 ntBASIC1.57□□□□□ -2.16
PEX1O43933 MIR1302-7-201ENST00000408841 72 ntBASIC1.57□□□□□ -2.16
PEX1O43933 RNA5SP261-201ENST00000410536 106 ntBASIC1.57□□□□□ -2.16
PEX1O43933 RNU4-69P-201ENST00000410677 143 ntBASIC1.57□□□□□ -2.16
PEX1O43933 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.57□□□□□ -2.16
PEX1O43933 AP000942.3-201ENST00000603702 160 ntBASIC1.57□□□□□ -2.16
PEX1O43933 SNORD1A-201ENST00000364968 72 ntBASIC1.56□□□□□ -2.16
PEX1O43933 SNORA32-201ENST00000384072 121 ntBASIC1.56□□□□□ -2.16
PEX1O43933 RNA5SP89-201ENST00000410300 108 ntBASIC1.56□□□□□ -2.16
PEX1O43933 SNORA19.1-201ENST00000410656 129 ntBASIC1.56□□□□□ -2.16
PEX1O43933 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.56□□□□□ -2.16
PEX1O43933 AL031737.1-201ENST00000450125 223 ntBASIC1.56□□□□□ -2.16
PEX1O43933 RNU6-893P-201ENST00000458841 100 ntBASIC1.56□□□□□ -2.16
PEX1O43933 AC019176.1-201ENST00000518519 225 ntBASIC1.56□□□□□ -2.16
PEX1O43933 MIR5009-201ENST00000578736 100 ntBASIC1.56□□□□□ -2.16
PEX1O43933 MIR4255-201ENST00000579351 72 ntBASIC1.56□□□□□ -2.16
PEX1O43933 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.56□□□□□ -2.16
PEX1O43933 AL162726.3-218ENST00000636401 95 ntBASIC1.56□□□□□ -2.16
PEX1O43933 AL161722.3-201ENST00000605789 2983 ntBASIC1.56□□□□□ -2.16
PEX1O43933 RNU6-1298P-201ENST00000362456 101 ntBASIC1.55□□□□□ -2.16
PEX1O43933 Y_RNA.49-201ENST00000362714 112 ntBASIC1.55□□□□□ -2.16
PEX1O43933 SNORD115-19-201ENST00000363098 82 ntBASIC1.55□□□□□ -2.16
PEX1O43933 SNORA25.3-201ENST00000363205 127 ntBASIC1.55□□□□□ -2.16
PEX1O43933 SNORD115-18-201ENST00000363293 82 ntBASIC1.55□□□□□ -2.16
PEX1O43933 SNORD115-17-201ENST00000364612 82 ntBASIC1.55□□□□□ -2.16
PEX1O43933 RNU6-616P-201ENST00000384353 107 ntBASIC1.55□□□□□ -2.16
PEX1O43933 AC108667.1-201ENST00000428618 249 ntBASIC1.55□□□□□ -2.16
PEX1O43933 HSPE1P24-201ENST00000450782 238 ntBASIC1.55□□□□□ -2.16
PEX1O43933 snoU13.9-201ENST00000458927 103 ntBASIC1.55□□□□□ -2.16
PEX1O43933 PRELID3BP2-201ENST00000605362 201 ntBASIC1.55□□□□□ -2.16
PEX1O43933 GHRLOS.1-201ENST00000610995 70 ntBASIC1.55□□□□□ -2.16
PEX1O43933 Y_RNA.328-201ENST00000365208 113 ntBASIC1.54□□□□□ -2.16
PEX1O43933 MIR30A-201ENST00000385092 71 ntBASIC1.54□□□□□ -2.16
PEX1O43933 RNU6-816P-201ENST00000390914 107 ntBASIC1.54□□□□□ -2.16
PEX1O43933 SNORA17.3-201ENST00000391159 129 ntBASIC1.54□□□□□ -2.16
PEX1O43933 RNU6-1268P-201ENST00000391214 107 ntBASIC1.54□□□□□ -2.16
PEX1O43933 RNU6-1239P-201ENST00000391310 107 ntBASIC1.54□□□□□ -2.16
PEX1O43933 AL353813.1-201ENST00000440700 253 ntBASIC1.54□□□□□ -2.16
PEX1O43933 RNU6-168P-201ENST00000516189 101 ntBASIC1.54□□□□□ -2.16
PEX1O43933 RNU6-947P-201ENST00000516264 106 ntBASIC1.54□□□□□ -2.16
PEX1O43933 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
PEX1O43933 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
PEX1O43933 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.54□□□□□ -2.16
PEX1O43933 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
PEX1O43933 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
PEX1O43933 Y_RNA.299-201ENST00000364973 94 ntBASIC1.53□□□□□ -2.16
PEX1O43933 Y_RNA.495-201ENST00000384435 112 ntBASIC1.53□□□□□ -2.16
PEX1O43933 MIR320A-201ENST00000385302 82 ntBASIC1.53□□□□□ -2.16
PEX1O43933 AC244023.1-201ENST00000426884 112 ntBASIC1.53□□□□□ -2.16
PEX1O43933 AC245047.7-201ENST00000440265 293 ntBASIC1.53□□□□□ -2.16
PEX1O43933 CYP3A52P-201ENST00000563326 91 ntBASIC1.53□□□□□ -2.16
PEX1O43933 AC242498.1-201ENST00000604134 111 ntBASIC1.53□□□□□ -2.16
PEX1O43933 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.52□□□□□ -2.17
PEX1O43933 RNU6-766P-201ENST00000362478 107 ntBASIC1.52□□□□□ -2.17
PEX1O43933 Y_RNA.309-201ENST00000365046 111 ntBASIC1.52□□□□□ -2.17
PEX1O43933 RNU6-756P-201ENST00000383997 107 ntBASIC1.52□□□□□ -2.17
PEX1O43933 SNORA51.5-201ENST00000384126 131 ntBASIC1.52□□□□□ -2.17
PEX1O43933 SNORA18-201ENST00000384416 132 ntBASIC1.52□□□□□ -2.17
PEX1O43933 SNORA67.5-201ENST00000391036 107 ntBASIC1.52□□□□□ -2.17
PEX1O43933 RPL39P25-201ENST00000449384 154 ntBASIC1.52□□□□□ -2.17
PEX1O43933 RNU6-165P-201ENST00000517170 99 ntBASIC1.52□□□□□ -2.17
PEX1O43933 AP003716.2-201ENST00000528260 108 ntBASIC1.52□□□□□ -2.17
PEX1O43933 AL357312.1-201ENST00000603879 298 ntBASIC1.52□□□□□ -2.17
PEX1O43933 RNA5SP48-201ENST00000363969 126 ntBASIC1.51□□□□□ -2.17
PEX1O43933 MIR1302-5-201ENST00000408164 150 ntBASIC1.51□□□□□ -2.17
PEX1O43933 AC027119.1-201ENST00000440877 241 ntBASIC1.51□□□□□ -2.17
PEX1O43933 AC079140.2-201ENST00000506193 142 ntBASIC1.51□□□□□ -2.17
PEX1O43933 RNU6-537P-201ENST00000517277 103 ntBASIC1.51□□□□□ -2.17
PEX1O43933 RNU6-363P-201ENST00000362895 105 ntBASIC1.5□□□□□ -2.17
PEX1O43933 RNU6-32P-201ENST00000383948 107 ntBASIC1.5□□□□□ -2.17
PEX1O43933 RNU6-13P-201ENST00000384248 107 ntBASIC1.5□□□□□ -2.17
PEX1O43933 RNU6-12P-201ENST00000384604 107 ntBASIC1.5□□□□□ -2.17
PEX1O43933 RNU6-41P-201ENST00000384741 107 ntBASIC1.5□□□□□ -2.17
PEX1O43933 MIR590-201ENST00000385008 97 ntBASIC1.5□□□□□ -2.17
PEX1O43933 MIR605-201ENST00000385078 83 ntBASIC1.5□□□□□ -2.17
PEX1O43933 RNU6-1307P-201ENST00000391012 103 ntBASIC1.5□□□□□ -2.17
PEX1O43933 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.5□□□□□ -2.17
PEX1O43933 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.5□□□□□ -2.17
PEX1O43933 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.5□□□□□ -2.17
PEX1O43933 RNU6-109P-201ENST00000516364 107 ntBASIC1.5□□□□□ -2.17
PEX1O43933 RNU6-184P-201ENST00000516514 107 ntBASIC1.5□□□□□ -2.17
PEX1O43933 RNU7-35P-201ENST00000517174 62 ntBASIC1.5□□□□□ -2.17
PEX1O43933 MIR7974-201ENST00000615835 79 ntBASIC1.5□□□□□ -2.17
PEX1O43933 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms