Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 SNORA16B-201ENST00000364674 135 ntBASIC2.11□□□□□ -2.07
PRICKLE3O43900 RNU6-950P-201ENST00000384651 107 ntBASIC2.11□□□□□ -2.07
PRICKLE3O43900 MIR516B2-201ENST00000385190 85 ntBASIC2.11□□□□□ -2.07
PRICKLE3O43900 MIR136-201ENST00000385207 82 ntBASIC2.11□□□□□ -2.07
PRICKLE3O43900 RNU6-788P-201ENST00000390967 104 ntBASIC2.11□□□□□ -2.07
PRICKLE3O43900 RNU6-1307P-201ENST00000391012 103 ntBASIC2.11□□□□□ -2.07
PRICKLE3O43900 SNORA48.3-201ENST00000391081 134 ntBASIC2.11□□□□□ -2.07
PRICKLE3O43900 Y_RNA.609-201ENST00000410669 89 ntBASIC2.11□□□□□ -2.07
PRICKLE3O43900 BX510359.4-201ENST00000423750 193 ntBASIC2.11□□□□□ -2.07
PRICKLE3O43900 RPL23AP42-201ENST00000471152 471 ntBASIC2.11□□□□□ -2.07
PRICKLE3O43900 RNU7-12P-201ENST00000516030 62 ntBASIC2.11□□□□□ -2.07
PRICKLE3O43900 SCARNA16.3-201ENST00000516595 184 ntBASIC2.11□□□□□ -2.07
PRICKLE3O43900 SEPT14P17-201ENST00000617978 177 ntBASIC2.11□□□□□ -2.07
PRICKLE3O43900 MIR6873-201ENST00000622788 63 ntBASIC2.11□□□□□ -2.07
PRICKLE3O43900 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
PRICKLE3O43900 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
PRICKLE3O43900 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
PRICKLE3O43900 RNU6-1244P-201ENST00000363614 108 ntBASIC2.1□□□□□ -2.07
PRICKLE3O43900 MIR206-201ENST00000384872 86 ntBASIC2.1□□□□□ -2.07
PRICKLE3O43900 RNU11-3P-201ENST00000391111 133 ntBASIC2.1□□□□□ -2.07
PRICKLE3O43900 RNA5SP465-201ENST00000391195 109 ntBASIC2.1□□□□□ -2.07
PRICKLE3O43900 RNA5SP450-201ENST00000411206 102 ntBASIC2.1□□□□□ -2.07
PRICKLE3O43900 AL161932.1-201ENST00000437408 146 ntBASIC2.1□□□□□ -2.07
PRICKLE3O43900 RNU7-35P-201ENST00000517174 62 ntBASIC2.1□□□□□ -2.07
PRICKLE3O43900 MIR548AR-201ENST00000582191 57 ntBASIC2.1□□□□□ -2.07
PRICKLE3O43900 MIR5002-201ENST00000584713 97 ntBASIC2.1□□□□□ -2.07
PRICKLE3O43900 MIR6895-201ENST00000613497 78 ntBASIC2.1□□□□□ -2.07
PRICKLE3O43900 AC243994.1-201ENST00000618627 109 ntBASIC2.1□□□□□ -2.07
PRICKLE3O43900 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.1□□□□□ -2.07
PRICKLE3O43900 AC005336.3-201ENST00000623833 2679 ntBASIC2.1□□□□□ -2.07
PRICKLE3O43900 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
PRICKLE3O43900 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PRICKLE3O43900 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
PRICKLE3O43900 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
PRICKLE3O43900 SNORD28B-201ENST00000390993 75 ntBASIC2.09□□□□□ -2.07
PRICKLE3O43900 MIR8055-201ENST00000610739 97 ntBASIC2.09□□□□□ -2.07
PRICKLE3O43900 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.09□□□□□ -2.07
PRICKLE3O43900 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.08
PRICKLE3O43900 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
PRICKLE3O43900 Y_RNA.537-201ENST00000384626 109 ntBASIC2.08□□□□□ -2.08
PRICKLE3O43900 RNU6-1031P-201ENST00000384773 107 ntBASIC2.08□□□□□ -2.08
PRICKLE3O43900 MIR34C-201ENST00000384831 77 ntBASIC2.08□□□□□ -2.08
PRICKLE3O43900 MIR1287-201ENST00000408492 90 ntBASIC2.08□□□□□ -2.08
PRICKLE3O43900 RNU6-613P-201ENST00000410412 108 ntBASIC2.08□□□□□ -2.08
PRICKLE3O43900 SNORD123-201ENST00000459473 70 ntBASIC2.08□□□□□ -2.08
PRICKLE3O43900 AC104435.1-201ENST00000483483 166 ntBASIC2.08□□□□□ -2.08
PRICKLE3O43900 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.08□□□□□ -2.08
PRICKLE3O43900 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
PRICKLE3O43900 SNORD115-27-201ENST00000364430 82 ntBASIC2.07□□□□□ -2.08
PRICKLE3O43900 RNU6-342P-201ENST00000384521 104 ntBASIC2.07□□□□□ -2.08
PRICKLE3O43900 Y_RNA.567-201ENST00000384736 106 ntBASIC2.07□□□□□ -2.08
PRICKLE3O43900 RPS29P28-201ENST00000446439 141 ntBASIC2.07□□□□□ -2.08
PRICKLE3O43900 MIR4712-201ENST00000583750 82 ntBASIC2.07□□□□□ -2.08
PRICKLE3O43900 AP000942.3-201ENST00000603702 160 ntBASIC2.07□□□□□ -2.08
PRICKLE3O43900 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
PRICKLE3O43900 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
PRICKLE3O43900 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
PRICKLE3O43900 Y_RNA.173-201ENST00000363776 113 ntBASIC2.06□□□□□ -2.08
PRICKLE3O43900 RNU6-524P-201ENST00000384270 107 ntBASIC2.06□□□□□ -2.08
PRICKLE3O43900 SNORA64-201ENST00000384674 134 ntBASIC2.06□□□□□ -2.08
PRICKLE3O43900 AL023284.1-201ENST00000403956 276 ntBASIC2.06□□□□□ -2.08
PRICKLE3O43900 MIR548G-201ENST00000408442 89 ntBASIC2.06□□□□□ -2.08
PRICKLE3O43900 MIR5094-201ENST00000578766 85 ntBASIC2.06□□□□□ -2.08
PRICKLE3O43900 RNU6-90P-201ENST00000606352 106 ntBASIC2.06□□□□□ -2.08
PRICKLE3O43900 MIR6132-201ENST00000622083 109 ntBASIC2.06□□□□□ -2.08
PRICKLE3O43900 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.06□□□□□ -2.08
PRICKLE3O43900 MIR144-201ENST00000384886 86 ntBASIC2.05□□□□□ -2.08
PRICKLE3O43900 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
PRICKLE3O43900 HMGN1P33-201ENST00000432945 451 ntBASIC2.05□□□□□ -2.08
PRICKLE3O43900 AC245047.7-201ENST00000440265 293 ntBASIC2.05□□□□□ -2.08
PRICKLE3O43900 AC093850.1-201ENST00000454121 251 ntBASIC2.05□□□□□ -2.08
PRICKLE3O43900 snoU13.16-201ENST00000459350 104 ntBASIC2.05□□□□□ -2.08
PRICKLE3O43900 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.05□□□□□ -2.08
PRICKLE3O43900 AC093729.1-201ENST00000513074 128 ntBASIC2.05□□□□□ -2.08
PRICKLE3O43900 RNU6-1053P-201ENST00000515930 101 ntBASIC2.05□□□□□ -2.08
PRICKLE3O43900 RNA5SP82-201ENST00000516707 92 ntBASIC2.05□□□□□ -2.08
PRICKLE3O43900 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.05□□□□□ -2.08
PRICKLE3O43900 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.05□□□□□ -2.08
PRICKLE3O43900 MIR8065-201ENST00000620577 100 ntBASIC2.05□□□□□ -2.08
PRICKLE3O43900 MIR219B-201ENST00000637023 88 ntBASIC2.05□□□□□ -2.08
PRICKLE3O43900 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.05□□□□□ -2.08
PRICKLE3O43900 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.05□□□□□ -2.08
PRICKLE3O43900 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
PRICKLE3O43900 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
PRICKLE3O43900 RNU6-1229P-201ENST00000364295 107 ntBASIC2.04□□□□□ -2.08
PRICKLE3O43900 SNORA6-201ENST00000384033 151 ntBASIC2.04□□□□□ -2.08
PRICKLE3O43900 SNORA67.3-201ENST00000384366 140 ntBASIC2.04□□□□□ -2.08
PRICKLE3O43900 RNU6-1067P-201ENST00000384752 107 ntBASIC2.04□□□□□ -2.08
PRICKLE3O43900 MIR526A1-201ENST00000384897 85 ntBASIC2.04□□□□□ -2.08
PRICKLE3O43900 MIR597-201ENST00000384968 97 ntBASIC2.04□□□□□ -2.08
PRICKLE3O43900 MIR519C-201ENST00000385053 87 ntBASIC2.04□□□□□ -2.08
PRICKLE3O43900 RNU6-447P-201ENST00000410293 104 ntBASIC2.04□□□□□ -2.08
PRICKLE3O43900 RNU6-1118P-201ENST00000410382 104 ntBASIC2.04□□□□□ -2.08
PRICKLE3O43900 RNU6-1076P-201ENST00000410397 104 ntBASIC2.04□□□□□ -2.08
PRICKLE3O43900 RNU6-355P-201ENST00000410427 104 ntBASIC2.04□□□□□ -2.08
PRICKLE3O43900 RNU6-791P-201ENST00000410467 104 ntBASIC2.04□□□□□ -2.08
PRICKLE3O43900 RNU6-705P-201ENST00000410601 104 ntBASIC2.04□□□□□ -2.08
PRICKLE3O43900 RNU6-1100P-201ENST00000410691 104 ntBASIC2.04□□□□□ -2.08
PRICKLE3O43900 RNU6-860P-201ENST00000410860 104 ntBASIC2.04□□□□□ -2.08
PRICKLE3O43900 RNU6-1217P-201ENST00000411276 104 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms