Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 DNAJC19P9-201ENST00000555084 351 ntBASIC1.49□□□□□ -2.17
SMAD6O43541 MIR4791-201ENST00000607666 84 ntBASIC1.49□□□□□ -2.17
SMAD6O43541 AP001318.4-201ENST00000616637 121 ntBASIC1.49□□□□□ -2.17
SMAD6O43541 AC243994.1-201ENST00000618627 109 ntBASIC1.49□□□□□ -2.17
SMAD6O43541 AC087741.2-201ENST00000619415 172 ntBASIC1.49□□□□□ -2.17
SMAD6O43541 Y_RNA.369-201ENST00000365568 117 ntBASIC1.48□□□□□ -2.17
SMAD6O43541 MIR488-201ENST00000365739 83 ntBASIC1.48□□□□□ -2.17
SMAD6O43541 RNU6-203P-201ENST00000384038 104 ntBASIC1.48□□□□□ -2.17
SMAD6O43541 MIR590-201ENST00000385008 97 ntBASIC1.48□□□□□ -2.17
SMAD6O43541 SNORA26.6-201ENST00000391256 115 ntBASIC1.48□□□□□ -2.17
SMAD6O43541 RNU6-109P-201ENST00000516364 107 ntBASIC1.48□□□□□ -2.17
SMAD6O43541 RNU6-184P-201ENST00000516514 107 ntBASIC1.48□□□□□ -2.17
SMAD6O43541 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.48□□□□□ -2.17
SMAD6O43541 AL512598.1-201ENST00000610158 273 ntBASIC1.48□□□□□ -2.17
SMAD6O43541 AL162726.3-218ENST00000636401 95 ntBASIC1.48□□□□□ -2.17
SMAD6O43541 MIR6841-201ENST00000637129 72 ntBASIC1.48□□□□□ -2.17
SMAD6O43541 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
SMAD6O43541 SNORA22.1-201ENST00000362701 134 ntBASIC1.47□□□□□ -2.17
SMAD6O43541 SNORD73B-201ENST00000364394 72 ntBASIC1.47□□□□□ -2.17
SMAD6O43541 RNU6-1131P-201ENST00000364955 107 ntBASIC1.47□□□□□ -2.17
SMAD6O43541 RNU6-439P-201ENST00000384188 106 ntBASIC1.47□□□□□ -2.17
SMAD6O43541 Y_RNA.470-201ENST00000384307 117 ntBASIC1.47□□□□□ -2.17
SMAD6O43541 RNU6-1113P-201ENST00000384348 107 ntBASIC1.47□□□□□ -2.17
SMAD6O43541 MIR320A-201ENST00000385302 82 ntBASIC1.47□□□□□ -2.17
SMAD6O43541 RNU6-816P-201ENST00000390914 107 ntBASIC1.47□□□□□ -2.17
SMAD6O43541 RNU6-360P-201ENST00000390944 104 ntBASIC1.47□□□□□ -2.17
SMAD6O43541 RNU6-1268P-201ENST00000391214 107 ntBASIC1.47□□□□□ -2.17
SMAD6O43541 RNU6-1239P-201ENST00000391310 107 ntBASIC1.47□□□□□ -2.17
SMAD6O43541 RPL39P25-201ENST00000449384 154 ntBASIC1.47□□□□□ -2.17
SMAD6O43541 RNU7-113P-201ENST00000459273 62 ntBASIC1.47□□□□□ -2.17
SMAD6O43541 AC005908.1-201ENST00000468701 347 ntBASIC1.47□□□□□ -2.17
SMAD6O43541 AC023790.1-201ENST00000482174 347 ntBASIC1.47□□□□□ -2.17
SMAD6O43541 RNU6-917P-201ENST00000516294 104 ntBASIC1.47□□□□□ -2.17
SMAD6O43541 RNU6-762P-201ENST00000517107 102 ntBASIC1.47□□□□□ -2.17
SMAD6O43541 SNORA74.3-201ENST00000517108 154 ntBASIC1.47□□□□□ -2.17
SMAD6O43541 AC141557.1-201ENST00000540982 400 ntBASIC1.47□□□□□ -2.17
SMAD6O43541 AL020996.3-201ENST00000606617 222 ntBASIC1.47□□□□□ -2.17
SMAD6O43541 Y_RNA.773-201ENST00000607168 90 ntBASIC1.47□□□□□ -2.17
SMAD6O43541 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.47□□□□□ -2.17
SMAD6O43541 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.47□□□□□ -2.17
SMAD6O43541 MIR6717-201ENST00000622747 73 ntBASIC1.47□□□□□ -2.17
SMAD6O43541 MIR1255B1-201ENST00000636325 63 ntBASIC1.47□□□□□ -2.17
SMAD6O43541 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.46□□□□□ -2.18
SMAD6O43541 HMGN1P33-201ENST00000432945 451 ntBASIC1.46□□□□□ -2.18
SMAD6O43541 RNU7-73P-201ENST00000458743 63 ntBASIC1.46□□□□□ -2.18
SMAD6O43541 AC113410.1-201ENST00000505029 247 ntBASIC1.46□□□□□ -2.18
SMAD6O43541 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.46□□□□□ -2.18
SMAD6O43541 MIR3152-201ENST00000579801 74 ntBASIC1.46□□□□□ -2.18
SMAD6O43541 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
SMAD6O43541 ZNF209P-201ENST00000593450 2304 ntBASIC1.45□□□□□ -2.18
SMAD6O43541 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SMAD6O43541 RNU6-1123P-201ENST00000362347 106 ntBASIC1.45□□□□□ -2.18
SMAD6O43541 SNORD115-2-201ENST00000362842 82 ntBASIC1.45□□□□□ -2.18
SMAD6O43541 SNORD115-20-201ENST00000365099 82 ntBASIC1.45□□□□□ -2.18
SMAD6O43541 Y_RNA.388-201ENST00000383919 113 ntBASIC1.45□□□□□ -2.18
SMAD6O43541 Y_RNA.537-201ENST00000384626 109 ntBASIC1.45□□□□□ -2.18
SMAD6O43541 MIR1912-201ENST00000410389 80 ntBASIC1.45□□□□□ -2.18
SMAD6O43541 RNU6-955P-201ENST00000410497 104 ntBASIC1.45□□□□□ -2.18
SMAD6O43541 RNU4-69P-201ENST00000410677 143 ntBASIC1.45□□□□□ -2.18
SMAD6O43541 RNU6-904P-201ENST00000516206 101 ntBASIC1.45□□□□□ -2.18
SMAD6O43541 MIR4498-201ENST00000577599 66 ntBASIC1.45□□□□□ -2.18
SMAD6O43541 MIR548AE2-201ENST00000583456 67 ntBASIC1.45□□□□□ -2.18
SMAD6O43541 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.45□□□□□ -2.18
SMAD6O43541 AP000648.3-201ENST00000623539 4507 ntBASIC1.45□□□□□ -2.18
SMAD6O43541 Y_RNA.78-201ENST00000362970 110 ntBASIC1.44□□□□□ -2.18
SMAD6O43541 SNORD115-19-201ENST00000363098 82 ntBASIC1.44□□□□□ -2.18
SMAD6O43541 SNORD115-18-201ENST00000363293 82 ntBASIC1.44□□□□□ -2.18
SMAD6O43541 SNORD115-17-201ENST00000364612 82 ntBASIC1.44□□□□□ -2.18
SMAD6O43541 Y_RNA.338-201ENST00000365320 114 ntBASIC1.44□□□□□ -2.18
SMAD6O43541 Y_RNA.544-201ENST00000384650 113 ntBASIC1.44□□□□□ -2.18
SMAD6O43541 RNY1P7-201ENST00000384743 110 ntBASIC1.44□□□□□ -2.18
SMAD6O43541 MIR194-1-201ENST00000384892 85 ntBASIC1.44□□□□□ -2.18
SMAD6O43541 RNU1-78P-201ENST00000391248 165 ntBASIC1.44□□□□□ -2.18
SMAD6O43541 RNA5SP261-201ENST00000410536 106 ntBASIC1.44□□□□□ -2.18
SMAD6O43541 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.44□□□□□ -2.18
SMAD6O43541 AC004965.1-201ENST00000413033 213 ntBASIC1.44□□□□□ -2.18
SMAD6O43541 RNU6-893P-201ENST00000458841 100 ntBASIC1.44□□□□□ -2.18
SMAD6O43541 MIR1270-201ENST00000459320 83 ntBASIC1.44□□□□□ -2.18
SMAD6O43541 SNORA40.13-201ENST00000516379 120 ntBASIC1.44□□□□□ -2.18
SMAD6O43541 RNA5SP33-201ENST00000516687 98 ntBASIC1.44□□□□□ -2.18
SMAD6O43541 snoU13.31-201ENST00000607291 104 ntBASIC1.44□□□□□ -2.18
SMAD6O43541 Y_RNA.299-201ENST00000364973 94 ntBASIC1.43□□□□□ -2.18
SMAD6O43541 Y_RNA.430-201ENST00000384081 110 ntBASIC1.43□□□□□ -2.18
SMAD6O43541 AC245517.4-201ENST00000448601 281 ntBASIC1.43□□□□□ -2.18
SMAD6O43541 HSPE1P24-201ENST00000450782 238 ntBASIC1.43□□□□□ -2.18
SMAD6O43541 RNA5SP445-201ENST00000515889 115 ntBASIC1.43□□□□□ -2.18
SMAD6O43541 RNU1-92P-201ENST00000517017 135 ntBASIC1.43□□□□□ -2.18
SMAD6O43541 MIR4421-201ENST00000578133 69 ntBASIC1.43□□□□□ -2.18
SMAD6O43541 AC008133.2-201ENST00000624540 351 ntBASIC1.43□□□□□ -2.18
SMAD6O43541 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
SMAD6O43541 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
SMAD6O43541 RNU6-363P-201ENST00000362895 105 ntBASIC1.42□□□□□ -2.18
SMAD6O43541 Y_RNA.155-201ENST00000363632 101 ntBASIC1.42□□□□□ -2.18
SMAD6O43541 RNU6-294P-201ENST00000364999 102 ntBASIC1.42□□□□□ -2.18
SMAD6O43541 SNORA32-201ENST00000384072 121 ntBASIC1.42□□□□□ -2.18
SMAD6O43541 RNU6-616P-201ENST00000384353 107 ntBASIC1.42□□□□□ -2.18
SMAD6O43541 Y_RNA.507-201ENST00000384500 99 ntBASIC1.42□□□□□ -2.18
SMAD6O43541 RNU6-1067P-201ENST00000384752 107 ntBASIC1.42□□□□□ -2.18
SMAD6O43541 AL161935.2-201ENST00000414627 60 ntBASIC1.42□□□□□ -2.18
SMAD6O43541 snoU13.16-201ENST00000459350 104 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms