Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.85□□□□□ -2.27
PHF1O43189 UBL5P1-201ENST00000507979 193 ntBASIC0.85□□□□□ -2.27
PHF1O43189 MIR2115-201ENST00000516657 100 ntBASIC0.85□□□□□ -2.27
PHF1O43189 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.85□□□□□ -2.27
PHF1O43189 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
PHF1O43189 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
PHF1O43189 Y_RNA.170-201ENST00000363746 110 ntBASIC0.84□□□□□ -2.27
PHF1O43189 RNU6-396P-201ENST00000365369 105 ntBASIC0.84□□□□□ -2.27
PHF1O43189 Y_RNA.398-201ENST00000383952 99 ntBASIC0.84□□□□□ -2.27
PHF1O43189 SNORD116-18-201ENST00000383961 92 ntBASIC0.84□□□□□ -2.27
PHF1O43189 Y_RNA.433-201ENST00000384089 102 ntBASIC0.84□□□□□ -2.27
PHF1O43189 RNU6-209P-201ENST00000384118 107 ntBASIC0.84□□□□□ -2.27
PHF1O43189 RNU6-1319P-201ENST00000390855 104 ntBASIC0.84□□□□□ -2.27
PHF1O43189 RNU6-747P-201ENST00000390928 104 ntBASIC0.84□□□□□ -2.27
PHF1O43189 RNU6-241P-201ENST00000391148 104 ntBASIC0.84□□□□□ -2.27
PHF1O43189 RNU6-177P-201ENST00000411257 104 ntBASIC0.84□□□□□ -2.27
PHF1O43189 AC063976.4-201ENST00000421971 163 ntBASIC0.84□□□□□ -2.27
PHF1O43189 AC002429.1-201ENST00000437672 148 ntBASIC0.84□□□□□ -2.27
PHF1O43189 RNU7-90P-201ENST00000459216 62 ntBASIC0.84□□□□□ -2.27
PHF1O43189 MTND5P41-201ENST00000517498 206 ntBASIC0.84□□□□□ -2.27
PHF1O43189 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.84□□□□□ -2.27
PHF1O43189 AC112693.2-201ENST00000556538 232 ntBASIC0.84□□□□□ -2.27
PHF1O43189 AC104465.1-201ENST00000611365 139 ntBASIC0.84□□□□□ -2.27
PHF1O43189 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.84□□□□□ -2.27
PHF1O43189 MIR6717-201ENST00000622747 73 ntBASIC0.84□□□□□ -2.27
PHF1O43189 AC021753.1-201ENST00000635724 168 ntBASIC0.84□□□□□ -2.27
PHF1O43189 RNU6-349P-201ENST00000362402 107 ntBASIC0.83□□□□□ -2.28
PHF1O43189 Y_RNA.120-201ENST00000363304 110 ntBASIC0.83□□□□□ -2.28
PHF1O43189 Y_RNA.168-201ENST00000363740 102 ntBASIC0.83□□□□□ -2.28
PHF1O43189 RNU6-654P-201ENST00000364373 107 ntBASIC0.83□□□□□ -2.28
PHF1O43189 RNU4-38P-201ENST00000364472 129 ntBASIC0.83□□□□□ -2.28
PHF1O43189 RNU4-11P-201ENST00000365287 132 ntBASIC0.83□□□□□ -2.28
PHF1O43189 RNY1P5-201ENST00000383890 115 ntBASIC0.83□□□□□ -2.28
PHF1O43189 Y_RNA.400-201ENST00000383963 111 ntBASIC0.83□□□□□ -2.28
PHF1O43189 RNU6-602P-201ENST00000411155 105 ntBASIC0.83□□□□□ -2.28
PHF1O43189 AC244023.1-201ENST00000426884 112 ntBASIC0.83□□□□□ -2.28
PHF1O43189 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.83□□□□□ -2.28
PHF1O43189 RNU7-200P-201ENST00000516105 62 ntBASIC0.83□□□□□ -2.28
PHF1O43189 RNU6-255P-201ENST00000516957 105 ntBASIC0.83□□□□□ -2.28
PHF1O43189 AC036111.3-201ENST00000526389 112 ntBASIC0.83□□□□□ -2.28
PHF1O43189 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.83□□□□□ -2.28
PHF1O43189 MIR4264-201ENST00000583520 66 ntBASIC0.83□□□□□ -2.28
PHF1O43189 AC242498.1-201ENST00000604134 111 ntBASIC0.83□□□□□ -2.28
PHF1O43189 AC011603.4-201ENST00000611325 277 ntBASIC0.83□□□□□ -2.28
PHF1O43189 MIR6857-201ENST00000613267 93 ntBASIC0.83□□□□□ -2.28
PHF1O43189 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
PHF1O43189 RNU6-151P-201ENST00000364158 107 ntBASIC0.82□□□□□ -2.28
PHF1O43189 Y_RNA.506-201ENST00000384494 102 ntBASIC0.82□□□□□ -2.28
PHF1O43189 AL603914.1-201ENST00000401964 204 ntBASIC0.82□□□□□ -2.28
PHF1O43189 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.82□□□□□ -2.28
PHF1O43189 MIR3973-201ENST00000579824 107 ntBASIC0.82□□□□□ -2.28
PHF1O43189 AC106800.4-201ENST00000614905 153 ntBASIC0.82□□□□□ -2.28
PHF1O43189 AC021613.1-201ENST00000623880 111 ntBASIC0.82□□□□□ -2.28
PHF1O43189 MIR924-201ENST00000638017 53 ntBASIC0.82□□□□□ -2.28
PHF1O43189 Y_RNA.85-201ENST00000363014 111 ntBASIC0.81□□□□□ -2.28
PHF1O43189 SNORA1.1-201ENST00000364671 133 ntBASIC0.81□□□□□ -2.28
PHF1O43189 RNY1P6-201ENST00000384193 109 ntBASIC0.81□□□□□ -2.28
PHF1O43189 MIR563-201ENST00000385080 79 ntBASIC0.81□□□□□ -2.28
PHF1O43189 MIR569-201ENST00000385228 96 ntBASIC0.81□□□□□ -2.28
PHF1O43189 Y_RNA.584-201ENST00000391090 114 ntBASIC0.81□□□□□ -2.28
PHF1O43189 RNA5SP261-201ENST00000410536 106 ntBASIC0.81□□□□□ -2.28
PHF1O43189 Y_RNA.651-201ENST00000459380 103 ntBASIC0.81□□□□□ -2.28
PHF1O43189 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.81□□□□□ -2.28
PHF1O43189 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.81□□□□□ -2.28
PHF1O43189 AC008163.1-202ENST00000636004 2889 ntBASIC0.8□□□□□ -2.28
PHF1O43189 AL596211.1-201ENST00000569873 2277 ntBASIC0.8□□□□□ -2.28
PHF1O43189 RNA5SP62-201ENST00000363457 110 ntBASIC0.8□□□□□ -2.28
PHF1O43189 SNORD114-23-201ENST00000363536 72 ntBASIC0.8□□□□□ -2.28
PHF1O43189 RNU6-1187P-201ENST00000364771 110 ntBASIC0.8□□□□□ -2.28
PHF1O43189 MIR532-201ENST00000385025 91 ntBASIC0.8□□□□□ -2.28
PHF1O43189 SNORD37.2-201ENST00000391075 66 ntBASIC0.8□□□□□ -2.28
PHF1O43189 SNORD111-201ENST00000408139 94 ntBASIC0.8□□□□□ -2.28
PHF1O43189 RPS3AP1-201ENST00000413190 320 ntBASIC0.8□□□□□ -2.28
PHF1O43189 MTATP6P21-201ENST00000440681 189 ntBASIC0.8□□□□□ -2.28
PHF1O43189 RNU7-45P-201ENST00000459460 63 ntBASIC0.8□□□□□ -2.28
PHF1O43189 RPL39P28-201ENST00000465655 155 ntBASIC0.8□□□□□ -2.28
PHF1O43189 RNA5SP330-201ENST00000517096 96 ntBASIC0.8□□□□□ -2.28
PHF1O43189 MIR548X2-201ENST00000579776 100 ntBASIC0.8□□□□□ -2.28
PHF1O43189 MIR4714-201ENST00000580728 77 ntBASIC0.8□□□□□ -2.28
PHF1O43189 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.8□□□□□ -2.28
PHF1O43189 AP001340.1-201ENST00000624405 217 ntBASIC0.8□□□□□ -2.28
PHF1O43189 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.8□□□□□ -2.28
PHF1O43189 MIR302B-201ENST00000362188 73 ntBASIC0.79□□□□□ -2.28
PHF1O43189 MIR342-201ENST00000362212 99 ntBASIC0.79□□□□□ -2.28
PHF1O43189 Y_RNA.215-201ENST00000364204 112 ntBASIC0.79□□□□□ -2.28
PHF1O43189 SNORD113.3-201ENST00000364630 78 ntBASIC0.79□□□□□ -2.28
PHF1O43189 Y_RNA.280-201ENST00000364765 112 ntBASIC0.79□□□□□ -2.28
PHF1O43189 SNORD38B-201ENST00000384690 67 ntBASIC0.79□□□□□ -2.28
PHF1O43189 MIR200A-201ENST00000384875 90 ntBASIC0.79□□□□□ -2.28
PHF1O43189 Y_RNA.686-201ENST00000516548 134 ntBASIC0.79□□□□□ -2.28
PHF1O43189 MIR4661-201ENST00000582720 75 ntBASIC0.79□□□□□ -2.28
PHF1O43189 AP000753.3-201ENST00000604083 169 ntBASIC0.79□□□□□ -2.28
PHF1O43189 AL109933.3-201ENST00000619095 188 ntBASIC0.79□□□□□ -2.28
PHF1O43189 SNORD38B-202ENST00000625943 69 ntBASIC0.79□□□□□ -2.28
PHF1O43189 Y_RNA.8-201ENST00000362353 102 ntBASIC0.78□□□□□ -2.28
PHF1O43189 RNA5SP257-201ENST00000363023 116 ntBASIC0.78□□□□□ -2.28
PHF1O43189 Y_RNA.330-201ENST00000365230 109 ntBASIC0.78□□□□□ -2.28
PHF1O43189 RNA5SP95-201ENST00000410319 137 ntBASIC0.78□□□□□ -2.28
PHF1O43189 RNA5SP144-201ENST00000410846 116 ntBASIC0.78□□□□□ -2.28
PHF1O43189 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 191.2 ms