Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 SNORD114-25-201ENST00000363742 72 ntBASIC-1.22□□□□□ -2.6
TRAV27A0A087WT01 RNU4-16P-201ENST00000364737 141 ntBASIC-1.22□□□□□ -2.6
TRAV27A0A087WT01 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.22□□□□□ -2.6
TRAV27A0A087WT01 RNU6-721P-201ENST00000410155 105 ntBASIC-1.22□□□□□ -2.6
TRAV27A0A087WT01 SNORA13-201ENST00000458790 133 ntBASIC-1.22□□□□□ -2.6
TRAV27A0A087WT01 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.22□□□□□ -2.6
TRAV27A0A087WT01 RNU6-191P-201ENST00000516295 94 ntBASIC-1.22□□□□□ -2.6
TRAV27A0A087WT01 RNA5SP67-201ENST00000516422 131 ntBASIC-1.22□□□□□ -2.6
TRAV27A0A087WT01 RNU7-137P-201ENST00000516788 62 ntBASIC-1.22□□□□□ -2.6
TRAV27A0A087WT01 RNU6-264P-201ENST00000517134 104 ntBASIC-1.22□□□□□ -2.6
TRAV27A0A087WT01 MIR5197-201ENST00000583721 112 ntBASIC-1.22□□□□□ -2.6
TRAV27A0A087WT01 AC013791.1-201ENST00000616619 62 ntBASIC-1.22□□□□□ -2.6
TRAV27A0A087WT01 MTND5P18-201ENST00000445624 1801 ntBASIC-1.23□□□□□ -2.61
TRAV27A0A087WT01 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.23□□□□□ -2.61
TRAV27A0A087WT01 Y_RNA.813-201ENST00000364639 102 ntBASIC-1.23□□□□□ -2.61
TRAV27A0A087WT01 AC107399.1-201ENST00000451226 265 ntBASIC-1.23□□□□□ -2.61
TRAV27A0A087WT01 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.23□□□□□ -2.61
TRAV27A0A087WT01 snoU13.13-201ENST00000458842 104 ntBASIC-1.23□□□□□ -2.61
TRAV27A0A087WT01 RPS29P25-201ENST00000481709 171 ntBASIC-1.23□□□□□ -2.61
TRAV27A0A087WT01 AC015540.1-201ENST00000615828 501 ntBASIC-1.23□□□□□ -2.61
TRAV27A0A087WT01 RNU6-502P-201ENST00000362419 108 ntBASIC-1.24□□□□□ -2.61
TRAV27A0A087WT01 Y_RNA.88-201ENST00000363029 99 ntBASIC-1.24□□□□□ -2.61
TRAV27A0A087WT01 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.24□□□□□ -2.61
TRAV27A0A087WT01 Y_RNA.634-201ENST00000364811 113 ntBASIC-1.24□□□□□ -2.61
TRAV27A0A087WT01 SNORD115-44-201ENST00000365391 82 ntBASIC-1.24□□□□□ -2.61
TRAV27A0A087WT01 MIR519E-201ENST00000385075 84 ntBASIC-1.24□□□□□ -2.61
TRAV27A0A087WT01 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.24□□□□□ -2.61
TRAV27A0A087WT01 SNORA53-201ENST00000391141 249 ntBASIC-1.24□□□□□ -2.61
TRAV27A0A087WT01 AC096644.2-201ENST00000429278 159 ntBASIC-1.24□□□□□ -2.61
TRAV27A0A087WT01 AC093423.1-201ENST00000440817 142 ntBASIC-1.24□□□□□ -2.61
TRAV27A0A087WT01 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-1.24□□□□□ -2.61
TRAV27A0A087WT01 Y_RNA.655-201ENST00000515919 96 ntBASIC-1.24□□□□□ -2.61
TRAV27A0A087WT01 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-1.24□□□□□ -2.61
TRAV27A0A087WT01 RNU6-911P-201ENST00000516523 104 ntBASIC-1.24□□□□□ -2.61
TRAV27A0A087WT01 SNORD67.1-201ENST00000516618 108 ntBASIC-1.24□□□□□ -2.61
TRAV27A0A087WT01 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.24□□□□□ -2.61
TRAV27A0A087WT01 AC024909.2-201ENST00000553035 286 ntBASIC-1.24□□□□□ -2.61
TRAV27A0A087WT01 MIR3179-1-201ENST00000578940 84 ntBASIC-1.24□□□□□ -2.61
TRAV27A0A087WT01 MIR3179-2-201ENST00000579107 84 ntBASIC-1.24□□□□□ -2.61
TRAV27A0A087WT01 MIR3179-3-201ENST00000579566 84 ntBASIC-1.24□□□□□ -2.61
TRAV27A0A087WT01 MIR3611-201ENST00000584484 83 ntBASIC-1.24□□□□□ -2.61
TRAV27A0A087WT01 MIR3179-4-201ENST00000617599 84 ntBASIC-1.24□□□□□ -2.61
TRAV27A0A087WT01 AC138305.3-201ENST00000624988 240 ntBASIC-1.24□□□□□ -2.61
TRAV27A0A087WT01 AL669831.3-213ENST00000636676 183 ntBASIC-1.24□□□□□ -2.61
TRAV27A0A087WT01 Y_RNA.157-201ENST00000363638 102 ntBASIC-1.25□□□□□ -2.61
TRAV27A0A087WT01 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.25□□□□□ -2.61
TRAV27A0A087WT01 SNORA32-201ENST00000384072 121 ntBASIC-1.25□□□□□ -2.61
TRAV27A0A087WT01 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.25□□□□□ -2.61
TRAV27A0A087WT01 SCARNA17-201ENST00000516183 144 ntBASIC-1.25□□□□□ -2.61
TRAV27A0A087WT01 MIR4460-201ENST00000577862 86 ntBASIC-1.25□□□□□ -2.61
TRAV27A0A087WT01 MIR548AG2-201ENST00000581228 64 ntBASIC-1.25□□□□□ -2.61
TRAV27A0A087WT01 AL359881.1-201ENST00000602916 267 ntBASIC-1.25□□□□□ -2.61
TRAV27A0A087WT01 Y_RNA.772-201ENST00000606692 102 ntBASIC-1.25□□□□□ -2.61
TRAV27A0A087WT01 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.25□□□□□ -2.61
TRAV27A0A087WT01 Y_RNA.286-201ENST00000364813 102 ntBASIC-1.26□□□□□ -2.61
TRAV27A0A087WT01 Y_RNA.314-201ENST00000365114 102 ntBASIC-1.26□□□□□ -2.61
TRAV27A0A087WT01 RNY3-201ENST00000365484 102 ntBASIC-1.26□□□□□ -2.61
TRAV27A0A087WT01 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.26□□□□□ -2.61
TRAV27A0A087WT01 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.26□□□□□ -2.61
TRAV27A0A087WT01 RNU6-937P-201ENST00000384325 106 ntBASIC-1.26□□□□□ -2.61
TRAV27A0A087WT01 RNU6-893P-201ENST00000458841 100 ntBASIC-1.26□□□□□ -2.61
TRAV27A0A087WT01 RNU6-1299P-201ENST00000516316 100 ntBASIC-1.26□□□□□ -2.61
TRAV27A0A087WT01 RNU6-764P-201ENST00000516396 105 ntBASIC-1.26□□□□□ -2.61
TRAV27A0A087WT01 RNU7-70P-201ENST00000516941 66 ntBASIC-1.26□□□□□ -2.61
TRAV27A0A087WT01 AC109635.3-201ENST00000529536 185 ntBASIC-1.26□□□□□ -2.61
TRAV27A0A087WT01 AC040926.1-201ENST00000530195 238 ntBASIC-1.26□□□□□ -2.61
TRAV27A0A087WT01 MIR3129-201ENST00000581095 76 ntBASIC-1.26□□□□□ -2.61
TRAV27A0A087WT01 Z99129.1-201ENST00000612510 255 ntBASIC-1.26□□□□□ -2.61
TRAV27A0A087WT01 MIR20A-201ENST00000362279 71 ntBASIC-1.27□□□□□ -2.61
TRAV27A0A087WT01 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.27□□□□□ -2.61
TRAV27A0A087WT01 Y_RNA.339-201ENST00000365325 102 ntBASIC-1.27□□□□□ -2.61
TRAV27A0A087WT01 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.27□□□□□ -2.61
TRAV27A0A087WT01 RNU7-195P-201ENST00000458793 62 ntBASIC-1.27□□□□□ -2.61
TRAV27A0A087WT01 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.27□□□□□ -2.61
TRAV27A0A087WT01 RNU6-415P-201ENST00000516252 97 ntBASIC-1.27□□□□□ -2.61
TRAV27A0A087WT01 AC145350.1-201ENST00000567426 208 ntBASIC-1.27□□□□□ -2.61
TRAV27A0A087WT01 MIR5692C2-201ENST00000577959 77 ntBASIC-1.27□□□□□ -2.61
TRAV27A0A087WT01 AC011603.4-201ENST00000611325 277 ntBASIC-1.27□□□□□ -2.61
TRAV27A0A087WT01 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.27□□□□□ -2.61
TRAV27A0A087WT01 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.28□□□□□ -2.61
TRAV27A0A087WT01 RNU6-484P-201ENST00000384016 107 ntBASIC-1.28□□□□□ -2.61
TRAV27A0A087WT01 RNU6-524P-201ENST00000384270 107 ntBASIC-1.28□□□□□ -2.61
TRAV27A0A087WT01 MIR617-201ENST00000385030 97 ntBASIC-1.28□□□□□ -2.61
TRAV27A0A087WT01 MIR518B-201ENST00000385127 83 ntBASIC-1.28□□□□□ -2.61
TRAV27A0A087WT01 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-1.28□□□□□ -2.61
TRAV27A0A087WT01 RNA5SP476-201ENST00000516613 103 ntBASIC-1.28□□□□□ -2.61
TRAV27A0A087WT01 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.28□□□□□ -2.61
TRAV27A0A087WT01 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.28□□□□□ -2.61
TRAV27A0A087WT01 MIR4500-201ENST00000579472 76 ntBASIC-1.28□□□□□ -2.61
TRAV27A0A087WT01 MIR6738-201ENST00000619620 64 ntBASIC-1.28□□□□□ -2.61
TRAV27A0A087WT01 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.29□□□□□ -2.62
TRAV27A0A087WT01 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.29□□□□□ -2.62
TRAV27A0A087WT01 SNORD63-201ENST00000384262 68 ntBASIC-1.29□□□□□ -2.62
TRAV27A0A087WT01 MIR517B-201ENST00000385102 67 ntBASIC-1.29□□□□□ -2.62
TRAV27A0A087WT01 AC098614.3-201ENST00000438957 440 ntBASIC-1.29□□□□□ -2.62
TRAV27A0A087WT01 RNU7-55P-201ENST00000459426 62 ntBASIC-1.29□□□□□ -2.62
TRAV27A0A087WT01 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-1.29□□□□□ -2.62
TRAV27A0A087WT01 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.29□□□□□ -2.62
TRAV27A0A087WT01 MRPS35P2-201ENST00000508242 191 ntBASIC-1.29□□□□□ -2.62
TRAV27A0A087WT01 SNORD22.1-201ENST00000516331 125 ntBASIC-1.29□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 177.8 ms