Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.31□□□□□ -2.2
COL4A3BPQ9Y5P4 RNU6-94P-201ENST00000607728 107 ntBASIC1.31□□□□□ -2.2
COL4A3BPQ9Y5P4 AC090425.1-201ENST00000610007 140 ntBASIC1.31□□□□□ -2.2
COL4A3BPQ9Y5P4 MIR6717-201ENST00000622747 73 ntBASIC1.31□□□□□ -2.2
COL4A3BPQ9Y5P4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.3□□□□□ -2.2
COL4A3BPQ9Y5P4 Y_RNA.441-201ENST00000384123 112 ntBASIC1.3□□□□□ -2.2
COL4A3BPQ9Y5P4 RNU6-1319P-201ENST00000390855 104 ntBASIC1.3□□□□□ -2.2
COL4A3BPQ9Y5P4 RNU6-747P-201ENST00000390928 104 ntBASIC1.3□□□□□ -2.2
COL4A3BPQ9Y5P4 RNU6-241P-201ENST00000391148 104 ntBASIC1.3□□□□□ -2.2
COL4A3BPQ9Y5P4 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.3□□□□□ -2.2
COL4A3BPQ9Y5P4 RNU6-602P-201ENST00000411155 105 ntBASIC1.3□□□□□ -2.2
COL4A3BPQ9Y5P4 RNU6-177P-201ENST00000411257 104 ntBASIC1.3□□□□□ -2.2
COL4A3BPQ9Y5P4 RPS29P28-201ENST00000446439 141 ntBASIC1.3□□□□□ -2.2
COL4A3BPQ9Y5P4 RNU7-62P-201ENST00000458856 62 ntBASIC1.3□□□□□ -2.2
COL4A3BPQ9Y5P4 RN7SKP179-201ENST00000516126 217 ntBASIC1.3□□□□□ -2.2
COL4A3BPQ9Y5P4 RNU6-794P-201ENST00000517261 64 ntBASIC1.3□□□□□ -2.2
COL4A3BPQ9Y5P4 DNAJC19P2-201ENST00000593340 302 ntBASIC1.3□□□□□ -2.2
COL4A3BPQ9Y5P4 MTND5P32-201ENST00000560711 1802 ntBASIC1.29□□□□□ -2.2
COL4A3BPQ9Y5P4 SNORD37.2-201ENST00000391075 66 ntBASIC1.29□□□□□ -2.2
COL4A3BPQ9Y5P4 RNU6-1190P-201ENST00000410811 104 ntBASIC1.29□□□□□ -2.2
COL4A3BPQ9Y5P4 RNU6-893P-201ENST00000458841 100 ntBASIC1.29□□□□□ -2.2
COL4A3BPQ9Y5P4 U7.7-201ENST00000459276 60 ntBASIC1.29□□□□□ -2.2
COL4A3BPQ9Y5P4 RNU7-121P-201ENST00000516604 62 ntBASIC1.29□□□□□ -2.2
COL4A3BPQ9Y5P4 Y_RNA.52-201ENST00000362760 96 ntBASIC1.28□□□□□ -2.2
COL4A3BPQ9Y5P4 Y_RNA.430-201ENST00000384081 110 ntBASIC1.28□□□□□ -2.2
COL4A3BPQ9Y5P4 RNU5E-9P-201ENST00000411164 104 ntBASIC1.28□□□□□ -2.2
COL4A3BPQ9Y5P4 RNA5SP247-201ENST00000411181 105 ntBASIC1.28□□□□□ -2.2
COL4A3BPQ9Y5P4 AC244023.1-201ENST00000426884 112 ntBASIC1.28□□□□□ -2.2
COL4A3BPQ9Y5P4 MTATP6P21-201ENST00000440681 189 ntBASIC1.28□□□□□ -2.2
COL4A3BPQ9Y5P4 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.28□□□□□ -2.2
COL4A3BPQ9Y5P4 AC242498.1-201ENST00000604134 111 ntBASIC1.28□□□□□ -2.2
COL4A3BPQ9Y5P4 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.21
COL4A3BPQ9Y5P4 SNORA26.6-201ENST00000391256 115 ntBASIC1.27□□□□□ -2.21
COL4A3BPQ9Y5P4 POLR2J4-204ENST00000418424 324 ntBASIC1.27□□□□□ -2.21
COL4A3BPQ9Y5P4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.27□□□□□ -2.21
COL4A3BPQ9Y5P4 RNU6-1110P-201ENST00000516462 101 ntBASIC1.27□□□□□ -2.21
COL4A3BPQ9Y5P4 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.27□□□□□ -2.21
COL4A3BPQ9Y5P4 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.27□□□□□ -2.21
COL4A3BPQ9Y5P4 Y_RNA.226-201ENST00000364337 114 ntBASIC1.26□□□□□ -2.21
COL4A3BPQ9Y5P4 RNU6-1082P-201ENST00000364574 107 ntBASIC1.26□□□□□ -2.21
COL4A3BPQ9Y5P4 SNORA25.9-201ENST00000365087 128 ntBASIC1.26□□□□□ -2.21
COL4A3BPQ9Y5P4 RNU6-1336P-201ENST00000383886 109 ntBASIC1.26□□□□□ -2.21
COL4A3BPQ9Y5P4 MIR1276-201ENST00000408707 83 ntBASIC1.26□□□□□ -2.21
COL4A3BPQ9Y5P4 RNA5SP255-201ENST00000516370 107 ntBASIC1.26□□□□□ -2.21
COL4A3BPQ9Y5P4 RNA5SP102-201ENST00000516865 106 ntBASIC1.26□□□□□ -2.21
COL4A3BPQ9Y5P4 AC025627.3-201ENST00000582078 182 ntBASIC1.26□□□□□ -2.21
COL4A3BPQ9Y5P4 AC021613.1-201ENST00000623880 111 ntBASIC1.26□□□□□ -2.21
COL4A3BPQ9Y5P4 MIR1-1-201ENST00000362147 71 ntBASIC1.25□□□□□ -2.21
COL4A3BPQ9Y5P4 Y_RNA.272-201ENST00000364696 102 ntBASIC1.25□□□□□ -2.21
COL4A3BPQ9Y5P4 RNU7-45P-201ENST00000459460 63 ntBASIC1.25□□□□□ -2.21
COL4A3BPQ9Y5P4 MIR3671-201ENST00000580455 88 ntBASIC1.25□□□□□ -2.21
COL4A3BPQ9Y5P4 Y_RNA.270-201ENST00000364693 104 ntBASIC1.24□□□□□ -2.21
COL4A3BPQ9Y5P4 RNY1P6-201ENST00000384193 109 ntBASIC1.24□□□□□ -2.21
COL4A3BPQ9Y5P4 MIR588-201ENST00000384900 83 ntBASIC1.24□□□□□ -2.21
COL4A3BPQ9Y5P4 MIR499A-201ENST00000384903 122 ntBASIC1.24□□□□□ -2.21
COL4A3BPQ9Y5P4 MIR1827-201ENST00000408549 66 ntBASIC1.24□□□□□ -2.21
COL4A3BPQ9Y5P4 MIR1285-1-201ENST00000408593 84 ntBASIC1.24□□□□□ -2.21
COL4A3BPQ9Y5P4 snoU13.2-201ENST00000459201 104 ntBASIC1.24□□□□□ -2.21
COL4A3BPQ9Y5P4 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.24□□□□□ -2.21
COL4A3BPQ9Y5P4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
COL4A3BPQ9Y5P4 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.24□□□□□ -2.21
COL4A3BPQ9Y5P4 RNU6-934P-201ENST00000365154 107 ntBASIC1.23□□□□□ -2.21
COL4A3BPQ9Y5P4 SNORD89-201ENST00000390981 114 ntBASIC1.23□□□□□ -2.21
COL4A3BPQ9Y5P4 MIR18B-201ENST00000454574 71 ntBASIC1.23□□□□□ -2.21
COL4A3BPQ9Y5P4 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.23□□□□□ -2.21
COL4A3BPQ9Y5P4 MIR4295-201ENST00000585286 85 ntBASIC1.23□□□□□ -2.21
COL4A3BPQ9Y5P4 SNORD18B-201ENST00000365659 72 ntBASIC1.22□□□□□ -2.21
COL4A3BPQ9Y5P4 MIR100-201ENST00000385259 80 ntBASIC1.22□□□□□ -2.21
COL4A3BPQ9Y5P4 RNU6-1165P-201ENST00000410119 107 ntBASIC1.22□□□□□ -2.21
COL4A3BPQ9Y5P4 RNU6-588P-201ENST00000410281 105 ntBASIC1.22□□□□□ -2.21
COL4A3BPQ9Y5P4 AC087343.1-201ENST00000477341 475 ntBASIC1.22□□□□□ -2.21
COL4A3BPQ9Y5P4 MIR6740-201ENST00000618268 113 ntBASIC1.22□□□□□ -2.21
COL4A3BPQ9Y5P4 SNORA22.1-201ENST00000362701 134 ntBASIC1.21□□□□□ -2.22
COL4A3BPQ9Y5P4 Y_RNA.497-201ENST00000384447 98 ntBASIC1.21□□□□□ -2.22
COL4A3BPQ9Y5P4 MIR1287-201ENST00000408492 90 ntBASIC1.21□□□□□ -2.22
COL4A3BPQ9Y5P4 AC108059.2-201ENST00000434626 151 ntBASIC1.21□□□□□ -2.22
COL4A3BPQ9Y5P4 AC098479.1-201ENST00000609225 154 ntBASIC1.21□□□□□ -2.22
COL4A3BPQ9Y5P4 MIR6504-201ENST00000613520 61 ntBASIC1.21□□□□□ -2.22
COL4A3BPQ9Y5P4 FTX_2.1-201ENST00000618816 94 ntBASIC1.21□□□□□ -2.22
COL4A3BPQ9Y5P4 MIR96-201ENST00000362288 78 ntBASIC1.2□□□□□ -2.22
COL4A3BPQ9Y5P4 RNU1-36P-201ENST00000365130 165 ntBASIC1.2□□□□□ -2.22
COL4A3BPQ9Y5P4 RNU6-449P-201ENST00000383914 107 ntBASIC1.2□□□□□ -2.22
COL4A3BPQ9Y5P4 Y_RNA.584-201ENST00000391090 114 ntBASIC1.2□□□□□ -2.22
COL4A3BPQ9Y5P4 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.2□□□□□ -2.22
COL4A3BPQ9Y5P4 RNA5SP237-201ENST00000410414 113 ntBASIC1.2□□□□□ -2.22
COL4A3BPQ9Y5P4 RPS26P5-201ENST00000418544 335 ntBASIC1.2□□□□□ -2.22
COL4A3BPQ9Y5P4 RNA5SP236-201ENST00000516169 116 ntBASIC1.2□□□□□ -2.22
COL4A3BPQ9Y5P4 AC011603.4-201ENST00000611325 277 ntBASIC1.2□□□□□ -2.22
COL4A3BPQ9Y5P4 MIR3658-201ENST00000636291 56 ntBASIC1.2□□□□□ -2.22
COL4A3BPQ9Y5P4 MIR6841-201ENST00000637129 72 ntBASIC1.2□□□□□ -2.22
COL4A3BPQ9Y5P4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.2□□□□□ -2.22
COL4A3BPQ9Y5P4 SNORD114-27-201ENST00000363766 70 ntBASIC1.19□□□□□ -2.22
COL4A3BPQ9Y5P4 SNORD12C-201ENST00000386307 89 ntBASIC1.19□□□□□ -2.22
COL4A3BPQ9Y5P4 MT-TF-201ENST00000387314 71 ntBASIC1.19□□□□□ -2.22
COL4A3BPQ9Y5P4 MIR4771-2-201ENST00000577758 74 ntBASIC1.19□□□□□ -2.22
COL4A3BPQ9Y5P4 MIR4771-1-201ENST00000582617 74 ntBASIC1.19□□□□□ -2.22
COL4A3BPQ9Y5P4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
COL4A3BPQ9Y5P4 AC010332.2-201ENST00000613083 1904 ntBASIC1.19□□□□□ -2.22
COL4A3BPQ9Y5P4 RNU4-16P-201ENST00000364737 141 ntBASIC1.18□□□□□ -2.22
COL4A3BPQ9Y5P4 RNU2-64P-201ENST00000411315 191 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms