Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 BTF3P4-201ENST00000418852 495 ntBASIC2.04□□□□□ -2.08
SIT1Q9Y3P8 MIR3670-2-201ENST00000582974 65 ntBASIC2.04□□□□□ -2.08
SIT1Q9Y3P8 MIR3670-1-201ENST00000584160 65 ntBASIC2.04□□□□□ -2.08
SIT1Q9Y3P8 MIR3670-3-201ENST00000584855 65 ntBASIC2.04□□□□□ -2.08
SIT1Q9Y3P8 MIR3670-4-201ENST00000612260 65 ntBASIC2.04□□□□□ -2.08
SIT1Q9Y3P8 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.04□□□□□ -2.08
SIT1Q9Y3P8 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
SIT1Q9Y3P8 RNA5SP190-201ENST00000365222 118 ntBASIC2.03□□□□□ -2.08
SIT1Q9Y3P8 SNORA51.10-201ENST00000384418 136 ntBASIC2.03□□□□□ -2.08
SIT1Q9Y3P8 RNU6-1190P-201ENST00000410811 104 ntBASIC2.03□□□□□ -2.08
SIT1Q9Y3P8 RPS3AP1-201ENST00000413190 320 ntBASIC2.03□□□□□ -2.08
SIT1Q9Y3P8 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.03□□□□□ -2.08
SIT1Q9Y3P8 MIR4764-201ENST00000580680 88 ntBASIC2.03□□□□□ -2.08
SIT1Q9Y3P8 MIR4679-1-201ENST00000637619 75 ntBASIC2.03□□□□□ -2.08
SIT1Q9Y3P8 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
SIT1Q9Y3P8 RNY1P10-201ENST00000363268 113 ntBASIC2.02□□□□□ -2.09
SIT1Q9Y3P8 Y_RNA.470-201ENST00000384307 117 ntBASIC2.02□□□□□ -2.09
SIT1Q9Y3P8 SNORA25.15-201ENST00000516487 89 ntBASIC2.02□□□□□ -2.09
SIT1Q9Y3P8 AC022254.1-201ENST00000567857 235 ntBASIC2.02□□□□□ -2.09
SIT1Q9Y3P8 Y_RNA.773-201ENST00000607168 90 ntBASIC2.02□□□□□ -2.09
SIT1Q9Y3P8 AC008133.2-201ENST00000624540 351 ntBASIC2.02□□□□□ -2.09
SIT1Q9Y3P8 MIR2052-201ENST00000636055 55 ntBASIC2.02□□□□□ -2.09
SIT1Q9Y3P8 Z97988.1-201ENST00000637697 135 ntBASIC2.02□□□□□ -2.09
SIT1Q9Y3P8 SNORA67.1-201ENST00000364749 141 ntBASIC2.01□□□□□ -2.09
SIT1Q9Y3P8 SNORA19.1-201ENST00000410656 129 ntBASIC2.01□□□□□ -2.09
SIT1Q9Y3P8 JTBP1-201ENST00000441314 247 ntBASIC2.01□□□□□ -2.09
SIT1Q9Y3P8 TRMT112P2-201ENST00000512910 132 ntBASIC2.01□□□□□ -2.09
SIT1Q9Y3P8 RNU6-322P-201ENST00000516010 103 ntBASIC2.01□□□□□ -2.09
SIT1Q9Y3P8 RNA5SP33-201ENST00000516687 98 ntBASIC2.01□□□□□ -2.09
SIT1Q9Y3P8 MIR4694-201ENST00000578534 80 ntBASIC2.01□□□□□ -2.09
SIT1Q9Y3P8 MIR548AE2-201ENST00000583456 67 ntBASIC2.01□□□□□ -2.09
SIT1Q9Y3P8 MIR8070-201ENST00000616510 88 ntBASIC2.01□□□□□ -2.09
SIT1Q9Y3P8 MIR203B-201ENST00000636080 86 ntBASIC2.01□□□□□ -2.09
SIT1Q9Y3P8 MIR1255B1-201ENST00000636325 63 ntBASIC2.01□□□□□ -2.09
SIT1Q9Y3P8 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SIT1Q9Y3P8 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
SIT1Q9Y3P8 Y_RNA.93-201ENST00000363066 109 ntBASIC2□□□□□ -2.09
SIT1Q9Y3P8 RNU6-1099P-201ENST00000363533 107 ntBASIC2□□□□□ -2.09
SIT1Q9Y3P8 RNU4-36P-201ENST00000364294 144 ntBASIC2□□□□□ -2.09
SIT1Q9Y3P8 RNU4-67P-201ENST00000364569 141 ntBASIC2□□□□□ -2.09
SIT1Q9Y3P8 Y_RNA.466-201ENST00000384294 113 ntBASIC2□□□□□ -2.09
SIT1Q9Y3P8 SNORD77B-201ENST00000391112 67 ntBASIC2□□□□□ -2.09
SIT1Q9Y3P8 RNY4P30-201ENST00000410216 95 ntBASIC2□□□□□ -2.09
SIT1Q9Y3P8 AC245517.4-201ENST00000448601 281 ntBASIC2□□□□□ -2.09
SIT1Q9Y3P8 MIR1270-201ENST00000459320 83 ntBASIC2□□□□□ -2.09
SIT1Q9Y3P8 RNU6-970P-201ENST00000516312 107 ntBASIC2□□□□□ -2.09
SIT1Q9Y3P8 WWP1P1-201ENST00000466609 2769 ntBASIC2□□□□□ -2.09
SIT1Q9Y3P8 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SIT1Q9Y3P8 Y_RNA.10-201ENST00000362371 110 ntBASIC1.99□□□□□ -2.09
SIT1Q9Y3P8 RNY3P2-201ENST00000362918 102 ntBASIC1.99□□□□□ -2.09
SIT1Q9Y3P8 SNORA1.1-201ENST00000364671 133 ntBASIC1.99□□□□□ -2.09
SIT1Q9Y3P8 SNORA25.9-201ENST00000365087 128 ntBASIC1.99□□□□□ -2.09
SIT1Q9Y3P8 Y_RNA.354-201ENST00000365448 111 ntBASIC1.99□□□□□ -2.09
SIT1Q9Y3P8 RNU6-409P-201ENST00000384114 104 ntBASIC1.99□□□□□ -2.09
SIT1Q9Y3P8 MIR520C-201ENST00000385005 87 ntBASIC1.99□□□□□ -2.09
SIT1Q9Y3P8 RNU6-733P-201ENST00000410759 104 ntBASIC1.99□□□□□ -2.09
SIT1Q9Y3P8 MTATP8P2-201ENST00000435212 202 ntBASIC1.99□□□□□ -2.09
SIT1Q9Y3P8 SNORD13-201ENST00000459299 104 ntBASIC1.99□□□□□ -2.09
SIT1Q9Y3P8 RNA5SP445-201ENST00000515889 115 ntBASIC1.99□□□□□ -2.09
SIT1Q9Y3P8 SNORA72.7-201ENST00000516349 94 ntBASIC1.99□□□□□ -2.09
SIT1Q9Y3P8 RNU6-1018P-201ENST00000516577 106 ntBASIC1.99□□□□□ -2.09
SIT1Q9Y3P8 DEFB131E-201ENST00000532329 154 ntBASIC1.99□□□□□ -2.09
SIT1Q9Y3P8 AC141557.1-201ENST00000540982 400 ntBASIC1.99□□□□□ -2.09
SIT1Q9Y3P8 FAM71BP1-201ENST00000604431 523 ntBASIC1.99□□□□□ -2.09
SIT1Q9Y3P8 AL359821.1-201ENST00000605519 182 ntBASIC1.99□□□□□ -2.09
SIT1Q9Y3P8 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SIT1Q9Y3P8 Y_RNA.360-201ENST00000365512 102 ntBASIC1.98□□□□□ -2.09
SIT1Q9Y3P8 Y_RNA.601-201ENST00000410500 113 ntBASIC1.98□□□□□ -2.09
SIT1Q9Y3P8 RNA5SP57-201ENST00000459463 123 ntBASIC1.98□□□□□ -2.09
SIT1Q9Y3P8 RNU6-109P-201ENST00000516364 107 ntBASIC1.98□□□□□ -2.09
SIT1Q9Y3P8 RNU6-184P-201ENST00000516514 107 ntBASIC1.98□□□□□ -2.09
SIT1Q9Y3P8 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.98□□□□□ -2.09
SIT1Q9Y3P8 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.98□□□□□ -2.09
SIT1Q9Y3P8 AL773524.1-201ENST00000614065 229 ntBASIC1.98□□□□□ -2.09
SIT1Q9Y3P8 MIR8065-201ENST00000620577 100 ntBASIC1.98□□□□□ -2.09
SIT1Q9Y3P8 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
SIT1Q9Y3P8 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
SIT1Q9Y3P8 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SIT1Q9Y3P8 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SIT1Q9Y3P8 Y_RNA.377-201ENST00000365644 108 ntBASIC1.97□□□□□ -2.09
SIT1Q9Y3P8 AP1B1P2-201ENST00000416196 106 ntBASIC1.97□□□□□ -2.09
SIT1Q9Y3P8 AC244636.1-201ENST00000421152 228 ntBASIC1.97□□□□□ -2.09
SIT1Q9Y3P8 SCARNA23-201ENST00000516060 130 ntBASIC1.97□□□□□ -2.09
SIT1Q9Y3P8 RNA5SP82-201ENST00000516707 92 ntBASIC1.97□□□□□ -2.09
SIT1Q9Y3P8 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
SIT1Q9Y3P8 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SIT1Q9Y3P8 Y_RNA.155-201ENST00000363632 101 ntBASIC1.96□□□□□ -2.1
SIT1Q9Y3P8 DEFA7P-201ENST00000382676 285 ntBASIC1.96□□□□□ -2.1
SIT1Q9Y3P8 RNU6-616P-201ENST00000384353 107 ntBASIC1.96□□□□□ -2.1
SIT1Q9Y3P8 MIR513A1-201ENST00000385138 129 ntBASIC1.96□□□□□ -2.1
SIT1Q9Y3P8 MIR577-201ENST00000385196 96 ntBASIC1.96□□□□□ -2.1
SIT1Q9Y3P8 AL451046.2-201ENST00000403074 277 ntBASIC1.96□□□□□ -2.1
SIT1Q9Y3P8 AC096949.1-201ENST00000412047 152 ntBASIC1.96□□□□□ -2.1
SIT1Q9Y3P8 HMGN1P33-201ENST00000432945 451 ntBASIC1.96□□□□□ -2.1
SIT1Q9Y3P8 AL353813.1-201ENST00000440700 253 ntBASIC1.96□□□□□ -2.1
SIT1Q9Y3P8 AL513534.2-201ENST00000603836 250 ntBASIC1.96□□□□□ -2.1
SIT1Q9Y3P8 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.96□□□□□ -2.1
SIT1Q9Y3P8 RNA5SP276-201ENST00000362580 94 ntBASIC1.95□□□□□ -2.1
SIT1Q9Y3P8 RNU6-832P-201ENST00000363319 107 ntBASIC1.95□□□□□ -2.1
SIT1Q9Y3P8 SNORA16B-201ENST00000364674 135 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 236.5 ms