Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 snoU18.1-201ENST00000629629 71 ntBASIC-0.08□□□□□ -2.42
NUP50Q9UKX7 SNORA25.1-201ENST00000362326 128 ntBASIC-0.09□□□□□ -2.42
NUP50Q9UKX7 SNORD114-5-201ENST00000362928 70 ntBASIC-0.09□□□□□ -2.42
NUP50Q9UKX7 RNU6-326P-201ENST00000365480 107 ntBASIC-0.09□□□□□ -2.42
NUP50Q9UKX7 RNU6-187P-201ENST00000384139 106 ntBASIC-0.09□□□□□ -2.42
NUP50Q9UKX7 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.09□□□□□ -2.42
NUP50Q9UKX7 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.09□□□□□ -2.42
NUP50Q9UKX7 RNA5SP237-201ENST00000410414 113 ntBASIC-0.09□□□□□ -2.42
NUP50Q9UKX7 AC096949.1-201ENST00000412047 152 ntBASIC-0.09□□□□□ -2.42
NUP50Q9UKX7 RPL39P25-201ENST00000449384 154 ntBASIC-0.09□□□□□ -2.42
NUP50Q9UKX7 RNA5SP227-201ENST00000516184 113 ntBASIC-0.09□□□□□ -2.42
NUP50Q9UKX7 AC006006.1-201ENST00000603082 144 ntBASIC-0.09□□□□□ -2.42
NUP50Q9UKX7 MIR376A2-201ENST00000636782 80 ntBASIC-0.09□□□□□ -2.42
NUP50Q9UKX7 RNU6-403P-201ENST00000363163 104 ntBASIC-0.1□□□□□ -2.43
NUP50Q9UKX7 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.1□□□□□ -2.43
NUP50Q9UKX7 Y_RNA.634-201ENST00000364811 113 ntBASIC-0.1□□□□□ -2.43
NUP50Q9UKX7 Y_RNA.395-201ENST00000383945 109 ntBASIC-0.1□□□□□ -2.43
NUP50Q9UKX7 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.1□□□□□ -2.43
NUP50Q9UKX7 RNU6-514P-201ENST00000384208 107 ntBASIC-0.1□□□□□ -2.43
NUP50Q9UKX7 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
NUP50Q9UKX7 SNORA26-201ENST00000391286 122 ntBASIC-0.1□□□□□ -2.43
NUP50Q9UKX7 RNU6-1299P-201ENST00000516316 100 ntBASIC-0.1□□□□□ -2.43
NUP50Q9UKX7 RNU6-765P-201ENST00000516916 99 ntBASIC-0.1□□□□□ -2.43
NUP50Q9UKX7 RNA5SP47-201ENST00000517230 109 ntBASIC-0.1□□□□□ -2.43
NUP50Q9UKX7 MIR6759-201ENST00000638110 65 ntBASIC-0.1□□□□□ -2.43
NUP50Q9UKX7 MIR302B-201ENST00000362188 73 ntBASIC-0.11□□□□□ -2.43
NUP50Q9UKX7 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.11□□□□□ -2.43
NUP50Q9UKX7 snoU2_19.2-201ENST00000363024 80 ntBASIC-0.11□□□□□ -2.43
NUP50Q9UKX7 RNU6-450P-201ENST00000364654 107 ntBASIC-0.11□□□□□ -2.43
NUP50Q9UKX7 RNU6-302P-201ENST00000365249 107 ntBASIC-0.11□□□□□ -2.43
NUP50Q9UKX7 RNU6-127P-201ENST00000390897 107 ntBASIC-0.11□□□□□ -2.43
NUP50Q9UKX7 RNU6-823P-201ENST00000391042 103 ntBASIC-0.11□□□□□ -2.43
NUP50Q9UKX7 SNORA53-201ENST00000391141 249 ntBASIC-0.11□□□□□ -2.43
NUP50Q9UKX7 RNA5SP261-201ENST00000410536 106 ntBASIC-0.11□□□□□ -2.43
NUP50Q9UKX7 AL731563.1-201ENST00000442202 214 ntBASIC-0.11□□□□□ -2.43
NUP50Q9UKX7 SNORA27.4-201ENST00000516650 95 ntBASIC-0.11□□□□□ -2.43
NUP50Q9UKX7 RNU6-135P-201ENST00000516769 101 ntBASIC-0.11□□□□□ -2.43
NUP50Q9UKX7 AC141846.1-201ENST00000568348 142 ntBASIC-0.11□□□□□ -2.43
NUP50Q9UKX7 AC097639.2-201ENST00000603159 172 ntBASIC-0.11□□□□□ -2.43
NUP50Q9UKX7 RNU4-73P-201ENST00000363164 141 ntBASIC-0.12□□□□□ -2.43
NUP50Q9UKX7 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.12□□□□□ -2.43
NUP50Q9UKX7 Y_RNA.351-201ENST00000365436 96 ntBASIC-0.12□□□□□ -2.43
NUP50Q9UKX7 Y_RNA.430-201ENST00000384081 110 ntBASIC-0.12□□□□□ -2.43
NUP50Q9UKX7 RNU6V-201ENST00000384105 107 ntBASIC-0.12□□□□□ -2.43
NUP50Q9UKX7 SNORA1-201ENST00000384107 130 ntBASIC-0.12□□□□□ -2.43
NUP50Q9UKX7 SNORA8.3-201ENST00000384679 139 ntBASIC-0.12□□□□□ -2.43
NUP50Q9UKX7 RNU6-291P-201ENST00000384720 107 ntBASIC-0.12□□□□□ -2.43
NUP50Q9UKX7 RNU6-1009P-201ENST00000390996 107 ntBASIC-0.12□□□□□ -2.43
NUP50Q9UKX7 MIR1252-201ENST00000408861 65 ntBASIC-0.12□□□□□ -2.43
NUP50Q9UKX7 RNU2-55P-201ENST00000411146 174 ntBASIC-0.12□□□□□ -2.43
NUP50Q9UKX7 RNA5SP153-201ENST00000516498 76 ntBASIC-0.12□□□□□ -2.43
NUP50Q9UKX7 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.12□□□□□ -2.43
NUP50Q9UKX7 MIR4491-201ENST00000581087 68 ntBASIC-0.12□□□□□ -2.43
NUP50Q9UKX7 AC091304.10-201ENST00000641554 121 ntBASIC-0.12□□□□□ -2.43
NUP50Q9UKX7 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.13□□□□□ -2.43
NUP50Q9UKX7 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.13□□□□□ -2.43
NUP50Q9UKX7 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.13□□□□□ -2.43
NUP50Q9UKX7 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.13□□□□□ -2.43
NUP50Q9UKX7 SNORD28-201ENST00000384706 75 ntBASIC-0.13□□□□□ -2.43
NUP50Q9UKX7 MIR215-201ENST00000384858 110 ntBASIC-0.13□□□□□ -2.43
NUP50Q9UKX7 MIR626-201ENST00000385032 94 ntBASIC-0.13□□□□□ -2.43
NUP50Q9UKX7 RNU6-848P-201ENST00000515948 107 ntBASIC-0.13□□□□□ -2.43
NUP50Q9UKX7 RNU6-617P-201ENST00000516147 107 ntBASIC-0.13□□□□□ -2.43
NUP50Q9UKX7 RNU6-473P-201ENST00000516164 107 ntBASIC-0.13□□□□□ -2.43
NUP50Q9UKX7 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.13□□□□□ -2.43
NUP50Q9UKX7 RNA5SP395-201ENST00000516567 118 ntBASIC-0.13□□□□□ -2.43
NUP50Q9UKX7 AC037487.3-201ENST00000606668 112 ntBASIC-0.13□□□□□ -2.43
NUP50Q9UKX7 AC091932.4-201ENST00000623386 200 ntBASIC-0.13□□□□□ -2.43
NUP50Q9UKX7 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.14□□□□□ -2.43
NUP50Q9UKX7 RNU6-923P-201ENST00000364753 107 ntBASIC-0.14□□□□□ -2.43
NUP50Q9UKX7 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.14□□□□□ -2.43
NUP50Q9UKX7 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.14□□□□□ -2.43
NUP50Q9UKX7 MIR760-201ENST00000390220 80 ntBASIC-0.14□□□□□ -2.43
NUP50Q9UKX7 SNRPGP8-201ENST00000454064 226 ntBASIC-0.14□□□□□ -2.43
NUP50Q9UKX7 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.14□□□□□ -2.43
NUP50Q9UKX7 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.14□□□□□ -2.43
NUP50Q9UKX7 RNU7-129P-201ENST00000516128 62 ntBASIC-0.14□□□□□ -2.43
NUP50Q9UKX7 AL133255.1-201ENST00000606374 441 ntBASIC-0.14□□□□□ -2.43
NUP50Q9UKX7 MIR6841-201ENST00000637129 72 ntBASIC-0.14□□□□□ -2.43
NUP50Q9UKX7 UBE2WP1-201ENST00000362030 340 ntBASIC-0.15□□□□□ -2.43
NUP50Q9UKX7 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.15□□□□□ -2.43
NUP50Q9UKX7 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.15□□□□□ -2.43
NUP50Q9UKX7 RNU6-211P-201ENST00000384047 107 ntBASIC-0.15□□□□□ -2.43
NUP50Q9UKX7 SNORA72.6-201ENST00000384520 129 ntBASIC-0.15□□□□□ -2.43
NUP50Q9UKX7 Y_RNA.539-201ENST00000384635 107 ntBASIC-0.15□□□□□ -2.43
NUP50Q9UKX7 MIR610-201ENST00000385139 96 ntBASIC-0.15□□□□□ -2.43
NUP50Q9UKX7 MIR643-201ENST00000385267 97 ntBASIC-0.15□□□□□ -2.43
NUP50Q9UKX7 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.15□□□□□ -2.43
NUP50Q9UKX7 RPL21P38-201ENST00000418090 167 ntBASIC-0.15□□□□□ -2.43
NUP50Q9UKX7 ELOCP20-201ENST00000422460 345 ntBASIC-0.15□□□□□ -2.43
NUP50Q9UKX7 AC141557.1-201ENST00000540982 400 ntBASIC-0.15□□□□□ -2.43
NUP50Q9UKX7 MTND5P34-201ENST00000568888 325 ntBASIC-0.15□□□□□ -2.43
NUP50Q9UKX7 MIR5197-201ENST00000583721 112 ntBASIC-0.15□□□□□ -2.43
NUP50Q9UKX7 MIR4795-201ENST00000584182 89 ntBASIC-0.15□□□□□ -2.43
NUP50Q9UKX7 MIR4639-201ENST00000584938 69 ntBASIC-0.15□□□□□ -2.43
NUP50Q9UKX7 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.15□□□□□ -2.43
NUP50Q9UKX7 AC090971.5-201ENST00000621102 293 ntBASIC-0.15□□□□□ -2.43
NUP50Q9UKX7 MIR369-201ENST00000362155 70 ntBASIC-0.16□□□□□ -2.44
NUP50Q9UKX7 SNORA32.1-201ENST00000364514 115 ntBASIC-0.16□□□□□ -2.44
NUP50Q9UKX7 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.16□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms